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5T5H
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BU of 5t5h by Molmil
Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit
Descriptor: 40S ribosomal protein L14, 5.8S rRNA, 5S rRNA, ...
Authors:Liu, Z, Gutierrez-Vargas, C, Wei, J, Grassucci, R.A, Ramesh, M, Espina, N, Sun, M, Tutuncuoglu, B, Madison-Antenucci, S, Woolford Jr, J.L, Tong, L, Frank, J.
Deposit date:2016-08-31
Release date:2016-10-12
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit.
Proc.Natl.Acad.Sci.USA, 113, 2016
6FDH
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BU of 6fdh by Molmil
Structure of H. salinarum RosR (vng0258) grown from KCl
Descriptor: CHLORIDE ION, DNA binding protein, SULFATE ION
Authors:Shaanan, B, Kutnowski, N.
Deposit date:2017-12-23
Release date:2018-08-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The 3-D structure of VNG0258H/RosR - A haloarchaeal DNA-binding protein in its ionic shell.
J. Struct. Biol., 204, 2018
6LNZ
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NMR solution structure of VEGF G-quadruplex bound a non-planar cyclometalated-carbene platinum(II) complex
Descriptor: DNA (5'-D(*CP*GP*GP*GP*GP*CP*GP*GP*GP*CP*CP*TP*TP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), cyclometalated-carbene platinum(II) complex
Authors:Liu, W, Zhu, B.Z, Mao, Z.W.
Deposit date:2020-01-02
Release date:2021-01-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Selectivity and Targeting of G-Quadruplex Binders Activated by Adaptive Binding and Controlled by Chemical Kinetics.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZLU
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BU of 6zlu by Molmil
Closed-closed state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6FAQ
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BU of 6faq by Molmil
Structure of H. salinarum RosR (vng0258) grown from KBr
Descriptor: BROMIDE ION, DNA binding protein, SULFATE ION
Authors:Shaanan, B, Kutnowski, N.
Deposit date:2017-12-16
Release date:2018-08-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The 3-D structure of VNG0258H/RosR - A haloarchaeal DNA-binding protein in its ionic shell.
J. Struct. Biol., 204, 2018
6VJC
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BU of 6vjc by Molmil
LmFPPS mutant T164Y in complex with 476A, IPP & Ca
Descriptor: 3-butyl-1-(2,2-diphosphonoethyl)pyridinium, ACETATE ION, CALCIUM ION, ...
Authors:Maheshwari, S, Kim, Y.S, Aripirala, S, Gabelli, S.B.
Deposit date:2020-01-15
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identifying Structural Determinants of Product Specificity in Leishmania major Farnesyl Diphosphate Synthase.
Biochemistry, 59, 2020
6W07
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BU of 6w07 by Molmil
Bruton's tyrosine kinase in complex with compound 1
Descriptor: DIMETHYL SULFOXIDE, Tyrosine-protein kinase BTK, ~{N}-[[2-methyl-4-[2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]phenyl]methyl]-3-propan-2-yloxy-azetidine-1-carboxamide
Authors:Metrick, C.M, Marcotte, D.J.
Deposit date:2020-02-29
Release date:2020-12-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Discovery of BIIB068: A Selective, Potent, Reversible Bruton's Tyrosine Kinase Inhibitor as an Orally Efficacious Agent for Autoimmune Diseases.
J.Med.Chem., 63, 2020
7USE
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BU of 7use by Molmil
Cryo-EM structure of WAVE regulatory complex with Rac1 bound on both A and D site
Descriptor: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Ding, B, Yang, S, Chen, B, Chowdhury, S.
Deposit date:2022-04-25
Release date:2022-09-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
7USC
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BU of 7usc by Molmil
Cryo-EM structure of WAVE Regulatory Complex
Descriptor: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, Nck-associated protein 1, ...
Authors:Ding, B, Yang, S, Chen, B, Chowdhury, S.
Deposit date:2022-04-25
Release date:2022-09-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
6T31
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BU of 6t31 by Molmil
Streptavidin variants harbouring an artificial organocatalyst based cofactor
Descriptor: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, Streptavidin
Authors:Lechner, H, Hocker, B.
Deposit date:2019-10-10
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
7USD
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BU of 7usd by Molmil
Cryo-EM structure of D-site Rac1-bound WAVE Regulatory Complex
Descriptor: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Ding, B, Yang, S, Chen, B, Chowdhury, S.
Deposit date:2022-04-25
Release date:2022-09-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
6T3J
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BU of 6t3j by Molmil
Dual Epitope Targeting by Anti-DR5 Antibodies
Descriptor: IgG1-hDR5-01-Heavy Chain, IgG1-hDR5-01-Light Chain, IgG1-hDR5-05-Heavy Chain, ...
Authors:Tauchert, M.J, Augustin, M, Krapp, S, Overdijk, M.B, Breij, E.C.W, Hibbert, R.G.
Deposit date:2019-10-11
Release date:2020-09-16
Last modified:2020-10-14
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Dual Epitope Targeting and Enhanced Hexamerization by DR5 Antibodies as a Novel Approach to Induce Potent Antitumor Activity Through DR5 Agonism.
Mol.Cancer Ther., 19, 2020
8V4F
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BU of 8v4f by Molmil
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Descriptor: CAB-A17 variable heavy-chain, CAB-A17 variable light chain, Spike protein S1
Authors:Hallberg, B.M, Das, H.
Deposit date:2023-11-29
Release date:2024-06-05
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structural basis of broad SARS-CoV-2 cross-neutralization by affinity-matured public antibodies.
Cell Rep Med, 5, 2024
6T92
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BU of 6t92 by Molmil
NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A complex of N120C mutant protein with the reduced form of the cofactor NADH and the substrate formate at a secondary site.
Descriptor: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Isupov, M.N, Yelmazer, B, De Rose, S.A, Littlechild, J.A.
Deposit date:2019-10-25
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structural insights into the NAD + -dependent formate dehydrogenase mechanism revealed from the NADH complex and the formate NAD + ternary complex of the Chaetomium thermophilum enzyme.
J.Struct.Biol., 212, 2020
6T8Z
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BU of 6t8z by Molmil
NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A ternary complex with the oxidised form of the cofactor NAD+ and the substrate formate both at a primary and secondary sites.
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Isupov, M.N, Yelmazer, B, De Rose, S.A, Littlechild, J.A.
Deposit date:2019-10-25
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Structural insights into the NAD + -dependent formate dehydrogenase mechanism revealed from the NADH complex and the formate NAD + ternary complex of the Chaetomium thermophilum enzyme.
J.Struct.Biol., 212, 2020
5LIH
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BU of 5lih by Molmil
Structure of a peptide-substrate bound to PKCiota core kinase domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MANGANESE (II) ION, ...
Authors:Soriano, E.V, Purkiss, A.G, McDonald, N.Q.
Deposit date:2016-07-14
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:aPKC Inhibition by Par3 CR3 Flanking Regions Controls Substrate Access and Underpins Apical-Junctional Polarization.
Dev.Cell, 38, 2016
6TBI
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BU of 6tbi by Molmil
Structure of a beta galactosidase with inhibitor
Descriptor: (1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triol, ACETATE ION, Beta-galactosidase, ...
Authors:Offen, W, Davies, G.
Deposit date:2019-11-01
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020
6NYB
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BU of 6nyb by Molmil
Structure of a MAPK pathway complex
Descriptor: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Park, E, Rawson, S, Li, K, Jeon, H, Eck, M.J.
Deposit date:2019-02-11
Release date:2019-10-09
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
8BGS
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BU of 8bgs by Molmil
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain
Descriptor: Microtubule-associated protein tau
Authors:Behr, T.S, Ryskeldi-Falcon, B.
Deposit date:2022-10-28
Release date:2023-05-24
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Tau filaments are tethered within brain extracellular vesicles in Alzheimer's disease.
Biorxiv, 2023
6W1A
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BU of 6w1a by Molmil
Crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2 bound to DNA
Descriptor: DNA (30-MER), GLYCEROL, PHOSPHATE ION, ...
Authors:Capodagli, G.C, Neiditch, M.B.
Deposit date:2020-03-03
Release date:2020-10-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.
Proc.Natl.Acad.Sci.USA, 117, 2020
8BGV
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BU of 8bgv by Molmil
Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
Descriptor: Microtubule-associated protein tau
Authors:Behr, T.S, Ryskeldi-Falcon, B.
Deposit date:2022-10-28
Release date:2023-05-24
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Tau filaments are tethered within brain extracellular vesicles in Alzheimer's disease.
Biorxiv, 2023
6R9N
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BU of 6r9n by Molmil
Peroxy diiron species of chemotaxis sensor ODP
Descriptor: CHLORIDE ION, FE (III) ION, OXYGEN ATOM, ...
Authors:Muok, A.R, Crane, B.R.
Deposit date:2019-04-03
Release date:2019-06-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.074 Å)
Cite:A di-iron protein recruited as an Fe[II] and oxygen sensor for bacterial chemotaxis functions by stabilizing an iron-peroxy species.
Proc.Natl.Acad.Sci.USA, 116, 2019
6VO6
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BU of 6vo6 by Molmil
Crystal Structure of Cj1427, an Essential NAD-dependent Dehydrogenase from Campylobacter jejuni, in the Presence of NADH and GDP
Descriptor: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, ...
Authors:Anderson, T.K, Spencer, K.D, Thoden, J.B, Huddleston, J.P, Raushel, F.M, Holden, H.M.
Deposit date:2020-01-30
Release date:2020-04-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Analysis of Cj1427, an Essential NAD-Dependent Dehydrogenase for the Biosynthesis of the Heptose Residues in the Capsular Polysaccharides ofCampylobacter jejuni.
Biochemistry, 59, 2020
5K78
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BU of 5k78 by Molmil
Dbr1 in complex with 16-mer branched RNA
Descriptor: FE (II) ION, RNA lariat debranching enzyme, putative, ...
Authors:Clark, N.E, Taylor, A.B, Hart, P.J.
Deposit date:2016-05-25
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:The RNA lariat debranching enzyme Dbr1: metal dependence and branched RNA co-crystal structures
Proc.Natl.Acad.Sci.USA, 2016
8DN0
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BU of 8dn0 by Molmil
E.coli DsbA in complex with N-(2-fluorophenyl)-5-methylisoxazole-3-carboxamide
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, N-(2-fluorophenyl)-5-methyl-1,2-oxazole-3-carboxamide, ...
Authors:Wang, G, Heras, B.
Deposit date:2022-07-10
Release date:2023-06-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:E.coli DsbA in complex with N-(2-fluorophenyl)-5-methylisoxazole-3-carboxamide
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