PDB: 243911 resultsInfo pagesStatus searchChemie searchBIRD

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5DXV	Crystal structure of Rethreaded DHFR Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Faham, S. Deposit date: 2015-09-24 Release date: 2016-06-08 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Protein rethreading: A novel approach to protein design. Sci Rep, 6, 2016
1K4U	Solution structure of the C-terminal SH3 domain of p67phox complexed with the C-terminal tail region of p47phox Descriptor: PHAGOCYTE NADPH OXIDASE SUBUNIT P47PHOX, PHAGOCYTE NADPH OXIDASE SUBUNIT P67PHOX Authors: Kami, K, Takeya, R, Sumimoto, H, Kohda, D. Deposit date: 2001-10-08 Release date: 2002-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Diverse recognition of non-PxxP peptide ligands by the SH3 domains from p67(phox), Grb2 and Pex13p. EMBO J., 21, 2002
6BCA	A Complex between PH Domain of LbcRhoGEF (AKAP-Lbc) and Activated RhoA Bound to a GTP Analog Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, A-kinase anchor protein 13, MAGNESIUM ION, ... Authors: Sternweis, P.C, Chen, Z. Deposit date: 2017-10-20 Release date: 2017-12-13 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.995 Å) Cite: Crystal structures of the PH domains from Lbc family of RhoGEFs bound to activated RhoA GTPase. Data Brief, 17, 2018
5YNZ	Crystal structure of the dihydroorotase domain (K1556A) of human CAD Descriptor: CAD protein, ZINC ION Authors: Huang, Y.H, Chen, K.L, Cheng, J.H, Huang, C.Y. Deposit date: 2017-10-26 Release date: 2018-10-24 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.774 Å) Cite: Crystal structures of monometallic dihydropyrimidinase and the human dihydroorotase domain K1556A mutant reveal no lysine carbamylation within the active site Biochem. Biophys. Res. Commun., 505, 2018
1XQI	Crystal Structure Analysis of an NDP kinase from Pyrobaculum aerophilum Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Nucleoside diphosphate kinase, TRIETHYLENE GLYCOL Authors: Pedelacq, J.D, Waldo, G.S, Cabantous, S, Liong, E.C, Berendzen, J, Terwilliger, T.C. Deposit date: 2004-10-12 Release date: 2005-09-20 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural and functional features of an NDP kinase from the hyperthermophile crenarchaeon Pyrobaculum aerophilum Protein Sci., 14, 2005
1VHW	Crystal structure of purine nucleoside phosphorylase with adenosine Descriptor: ADENOSINE, purine nucleoside phosphorylase Authors: Structural GenomiX Deposit date: 2003-12-01 Release date: 2003-12-30 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005
1PH8	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGCGG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*CP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.36 Å) Cite: Nucleotide Shuffling and Ssdna Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH9	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*AP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH6	Crystal Structure of THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*TP*GP*G)-3', SODIUM ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PHJ	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GG(3DR)GTTTTGGGG Descriptor: 5'-D(*GP*GP*(3DR)P*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', Telomere-binding protein alpha subunit, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1W6B	Solution NMR Structure of a Long Neurotoxin from the Venom of the Asian Cobra, 20 Structures Descriptor: LONG NEUROTOXIN 1 Authors: Talebzadeh-Farooji, M, Amininasab, M, Elmi, M.M, Naderi-Manesh, H, Sarbolouki, M.N. Deposit date: 2004-08-17 Release date: 2004-12-22 Last modified: 2024-11-13 Method: SOLUTION NMR Cite: Solution structure of long neurotoxin NTX-1 from the venom of Naja naja oxiana by 2D-NMR spectroscopy. Eur. J. Biochem., 271, 2004
5UK9	Wild-type K-Ras(GCP) pH 6.5 Descriptor: GLYCEROL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ... Authors: Parker, J.A, Mattos, C. Deposit date: 2017-01-20 Release date: 2018-01-10 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.887 Å) Cite: K-Ras Populates Conformational States Differently from Its Isoform H-Ras and Oncogenic Mutant K-RasG12D. Structure, 26, 2018
1VHJ	Crystal structure of purine nucleoside phosphorylase Descriptor: purine nucleoside phosphorylase Authors: Structural GenomiX Deposit date: 2003-12-01 Release date: 2003-12-30 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.23 Å) Cite: Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005
5WFN	Revised model of leiomodin 2-mediated actin regulation (alternate refinement of PDB 4RWT) Descriptor: Actin-5C, Leiomodin-2, MAGNESIUM ION, ... Authors: Yurtsever, Z, Eck, M.J, Dominguez, R. Deposit date: 2017-07-12 Release date: 2017-08-30 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structure of leiomodin 2 in complex with actin: a structural and functional reexamination Biophys.J., 113, 2017
1PH1	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGGGT Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', Telomere-binding protein alpha subunit, Telomere-binding protein beta subunit Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.51 Å) Cite: Nucleotide Shuffling and Ssdna Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH2	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH4	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*CP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH3	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGTG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*TP*G)-3', SODIUM ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH5	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG(3DR)GG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*(3DR)P*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH7	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGIGG Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*IP*GP*G)-3', CHLORIDE ION, ... Authors: Theobald, D.L, Schultz, S.C. Deposit date: 2003-05-29 Release date: 2003-06-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
5Z09	ST0452(Y97N)-UTP binding form Descriptor: Dual sugar-1-phosphate nucleotidylyltransferase, URIDINE 5'-TRIPHOSPHATE Authors: Honda, Y, Nakano, S, Ito, S, Dadashipour, M, Zhang, Z, Kawarabayasi, Y. Deposit date: 2017-12-19 Release date: 2018-10-31 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Improvement of ST0452N-Acetylglucosamine-1-Phosphate Uridyltransferase Activity by the Cooperative Effect of Two Single Mutations Identified through Structure-Based Protein Engineering Appl. Environ. Microbiol., 84, 2018
5UXY	The crystal structure of a DegV family protein from Eubacterium eligens loaded with heptadecanoic acid to 1.80 Angstrom resolution (ALTERNATIVE REFINEMENT OF PDB 3FDJ with HEPTADECANOIC acid) Descriptor: ACETIC ACID, DegV family protein, SODIUM ION, ... Authors: Cuypers, M.G, Ericson, M, subramanian, C, White, S.W, Rock, C.O. Deposit date: 2017-02-23 Release date: 2018-11-21 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstroem resolution J.Biol.Chem., 2018
1I8J	CRYSTAL STRUCTURE OF PORPHOBILINOGEN SYNTHASE COMPLEXED WITH THE INHIBITOR 4,7-DIOXOSEBACIC ACID Descriptor: 4,7-DIOXOSEBACIC ACID, MAGNESIUM ION, PORPHOBILINOGEN SYNTHASE, ... Authors: Kervinen, J, Jaffe, E.K, Stauffer, F, Neier, R, Wlodawer, A, Zdanov, A. Deposit date: 2001-03-14 Release date: 2001-06-20 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Mechanistic basis for suicide inactivation of porphobilinogen synthase by 4,7-dioxosebacic acid, an inhibitor that shows dramatic species selectivity. Biochemistry, 40, 2001
5BYZ	ERK5 in complex with small molecule Descriptor: 4-({5-fluoro-4-[2-methyl-1-(propan-2-yl)-1H-imidazol-5-yl]pyrimidin-2-yl}amino)-N-[2-(piperidin-1-yl)ethyl]benzamide, GLYCEROL, Mitogen-activated protein kinase 7 Authors: Chen, H, Tucker, J, Wang, X, Gavine, P.R, Philips, C, Augustin, M.A, Schreiner, P, Steinbacher, S, Preston, M, Ogg, D. Deposit date: 2015-06-11 Release date: 2016-05-04 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Discovery of a novel allosteric inhibitor-binding site in ERK5: comparison with the canonical kinase hinge ATP-binding site. Acta Crystallogr D Struct Biol, 72, 2016
2WDV	E. coli succinate:quinone oxidoreductase (SQR) with an empty quinone- binding pocket Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... Authors: Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G. Deposit date: 2009-03-26 Release date: 2009-08-25 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structure of Escherichia Coli Succinate:Quinone Oxidoreductase with an Occupied and Empty Quinone- Binding Site. J.Biol.Chem., 284, 2009

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