Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8EZW
DownloadVisualize
BU of 8ezw by Molmil
Structure of Apo ZrgA deletion 124-184 from Vibrio cholerae
Descriptor: TRIETHYLENE GLYCOL, Zinc-binding protein
Authors:Valencia, D.W, Yukl, E.T.
Deposit date:2022-11-01
Release date:2023-01-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and Function of the Zinc Binding Protein ZrgA from Vibrio cholerae.
Int J Mol Sci, 24, 2022
6UST
DownloadVisualize
BU of 6ust by Molmil
Gut microbial sulfatase from Hungatella hathewayi
Descriptor: CALCIUM ION, N-acetylgalactosamine 6-sulfate sulfatase
Authors:Ervin, S.M, Redinbo, M.R.
Deposit date:2019-10-28
Release date:2020-11-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights into Endobiotic Reactivation by Human Gut Microbiome-Encoded Sulfatases.
Biochemistry, 59, 2020
8EZ2
DownloadVisualize
BU of 8ez2 by Molmil
Plasmodium falciparum M1 in complex with inhibitor 15ag
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-31
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
4ZOG
DownloadVisualize
BU of 4zog by Molmil
VX-680/MK-0457 binds to human ABL1 also in inactive DFG conformations.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-METHOXYETHANOL, CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, ...
Authors:Kyomuhendo, P, Narayanan, D, Engh, R.A.
Deposit date:2015-05-06
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:VX-680/MK-0457 binds also to human ABL1 with inactive DFG conformations.
To Be Published
4ZOP
DownloadVisualize
BU of 4zop by Molmil
Co-crystal Structure of Lipid Kinase PI3K alpha with a selective phosphatidylinositol-3 kinase alpha inhibitor
Descriptor: (2S,3R)-N~1~-(8-tert-butyl-4,5-dihydro[1,3]thiazolo[4,5-h]quinazolin-2-yl)-3-methylpyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Knapp, M.S, Elling, R.A.
Deposit date:2015-05-06
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Co-crystal Structure of the Lipid Kinase PI3K alpha with a selective phosphatidylinositol-3 kinase alpha inhibitorCo-crystal Structure of the Lipid Kinase PI3K alpha with a selective phosphatidylinositol-3 kinase alpha inhibitor
To Be Published
8HP5
DownloadVisualize
BU of 8hp5 by Molmil
Crystal structure of (S)-2-haloacid dehalogenase
Descriptor: (S)-2-haloacid dehalogenase, 1,2-ETHANEDIOL
Authors:Yang, Q, Wang, L, Xu, X, Xing, X, Zhou, J.
Deposit date:2022-12-12
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Enzymatic hydrolysis on L-azetidine-2-carboxylate ring opening
Catalysis Science And Technology, 2023
4ZRF
DownloadVisualize
BU of 4zrf by Molmil
Crystal Structure of Hypothetical Thioesterase Protein SP_1851 from Streptococcus pneumoniae TIGR4
Descriptor: Hypothetical Thioesterase Protein SP_1851
Authors:Khandokar, Y.B, Srivastava, P, Forwood, J.K.
Deposit date:2015-05-12
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal Structure of Hypothetical Thioesterase Protein SP_1851 from Streptococcus pneumoniae TIGR4
To Be Published
8EYF
DownloadVisualize
BU of 8eyf by Molmil
Plasmodium falciparum M1 in complex with inhibitor 15aa
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-26
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
5JXE
DownloadVisualize
BU of 5jxe by Molmil
Human PD-1 ectodomain complexed with Pembrolizumab Fab
Descriptor: Pembrolizumab Fab heavy chain, Pembrolizumab Fab light chain, Programmed cell death protein 1
Authors:Na, Z, Bharath, S.R, Song, H.
Deposit date:2016-05-13
Release date:2016-08-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for blocking PD-1-mediated immune suppression by therapeutic antibody pembrolizumab.
Cell Res., 27, 2017
6UW3
DownloadVisualize
BU of 6uw3 by Molmil
The crystal structure of FbiA from Mycobacterium Smegmatis, GDP Bound form
Descriptor: CALCIUM ION, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Grinter, R, Gillett, D, Cordero, P.R.F, Greening, C.
Deposit date:2019-11-04
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
8EZ4
DownloadVisualize
BU of 8ez4 by Molmil
Plasmodium falciparum M17 in complex with inhibitor 9aa
Descriptor: CARBONATE ION, M17 leucyl aminopeptidase, N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]-N~2~-phenylglycinamide, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-31
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
8GUV
DownloadVisualize
BU of 8guv by Molmil
LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)
Descriptor: CALCIUM ION, PA-I galactophilic lectin, Tolcapone
Authors:Kuhaudomlarp, S, Siebs, E, Varrot, A, Imberty, A, Titz, A.
Deposit date:2022-09-13
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)
To Be Published
5JYI
DownloadVisualize
BU of 5jyi by Molmil
Trypsin bound with succinic acid at 1.9A
Descriptor: CALCIUM ION, Cationic trypsin, SODIUM ION, ...
Authors:Manohar, R, Kutumbarao, N.H.V, KarthiK, L, Malathy, P, Velmurugan, D, Gunasekaran, K.
Deposit date:2016-05-14
Release date:2016-07-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Trypsin bound with succinic acid at 1.9A
To Be Published
5JZK
DownloadVisualize
BU of 5jzk by Molmil
The Structure of Ultra Stable Green Fluorescent Protein
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Yong, K.J, Gunn, N.J, Scott, D.J, Griffin, M.D.W.
Deposit date:2016-05-17
Release date:2017-12-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using CLARITY.
Sci Rep, 8, 2018
6UWO
DownloadVisualize
BU of 6uwo by Molmil
Crystal structure of receptor binding domain 2 from Clostridium difficile translocase CDTb
Descriptor: ADP-ribosyltransferase binding component
Authors:Pozharski, E.
Deposit date:2019-11-05
Release date:2020-01-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UWU
DownloadVisualize
BU of 6uwu by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor ZL0516
Descriptor: 1,2-ETHANEDIOL, 2-{4-[(2R)-2-hydroxy-3-(4-methylpiperazin-1-yl)propoxy]-3,5-dimethylphenyl}-5,7-dimethoxy-4H-1-benzopyran-4-one, Bromodomain-containing protein 4
Authors:Leonard, P.G, Joseph, S.
Deposit date:2019-11-05
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Orally Bioavailable Chromone Derivatives as Potent and Selective BRD4 Inhibitors: Scaffold Hopping, Optimization, and Pharmacological Evaluation.
J.Med.Chem., 63, 2020
5JZB
DownloadVisualize
BU of 5jzb by Molmil
Crystal structure of HsaD bound to 3,5-dichlorobenzene sulphonamide
Descriptor: 3,5-dichlorobenzene-1-sulfonamide, 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase, PHOSPHATE ION
Authors:Ryan, A, Polycarpou, E, Lack, N.A, Evangelopoulos, D, Sieg, C, Halman, A, Bhakta, S, Sinclair, A, Eleftheriadou, O, McHugh, T.D, Keany, S, Lowe, E, Ballet, R, Abihammad, A, Ciulli, A, Sim, E.
Deposit date:2016-05-16
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Investigation of the mycobacterial enzyme HsaD as a potential novel target for anti-tubercular agents using a fragment-based drug design approach.
Br. J. Pharmacol., 174, 2017
5JZN
DownloadVisualize
BU of 5jzn by Molmil
Crystal structure of DCLK1-KD in complex with NVP-TAE684
Descriptor: 5-CHLORO-N-[2-METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1-YL]PHENYL]-N'-(2-PROPAN-2-YLSULFONYLPHENYL)PYRIMIDINE-2,4-DIAMINE, SULFATE ION, Serine/threonine-protein kinase DCLK1
Authors:Patel, O, Lucet, I.
Deposit date:2016-05-17
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Biochemical and Structural Insights into Doublecortin-like Kinase Domain 1.
Structure, 24, 2016
6UY3
DownloadVisualize
BU of 6uy3 by Molmil
Structure of anti-hCD33 conditional scFv with methotrexate
Descriptor: Anti-CD33 conditional scFv, GLYCEROL, METHOTREXATE, ...
Authors:Kimberlin, C.R, Park, S.
Deposit date:2019-11-11
Release date:2020-11-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct control of CAR T cells through small molecule-regulated antibodies.
Nat Commun, 12, 2021
4Z09
DownloadVisualize
BU of 4z09 by Molmil
Crystal structure of FVO strain Plasmodium falciparum AMA1 in complex with the RON2hp [Thr2040Ala] peptide
Descriptor: Apical membrane antigen 1, GLYCEROL, Rhoptry neck protein 2
Authors:Wang, G, McGowan, S, Norton, R.S, Scanlon, M.J.
Deposit date:2015-03-26
Release date:2016-08-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Activity Studies of beta-Hairpin Peptide Inhibitors of the Plasmodium falciparum AMA1-RON2 Interaction.
J.Mol.Biol., 428, 2016
5K4D
DownloadVisualize
BU of 5k4d by Molmil
Structure of eukaryotic translation initiation factor 3 subunit D (eIF3d) cap binding domain from Nasonia vitripennis, Crystal form 3
Descriptor: Eukaryotic translation initiation factor 3 subunit D
Authors:Kranzusch, P.J, Lee, A.S.Y, Doudna, J.A, Cate, J.H.D.
Deposit date:2016-05-20
Release date:2016-07-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation.
Nature, 536, 2016
5K4X
DownloadVisualize
BU of 5k4x by Molmil
M. thermoresistible IMPDH in complex with IMP and Compound 1
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase, ~{N}-(2~{H}-indazol-6-yl)-3,5-dimethyl-1~{H}-pyrazole-4-sulfonamide
Authors:Pacitto, A, Ascher, D.B, Blundell, T.L.
Deposit date:2016-05-22
Release date:2016-10-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Essential but Not Vulnerable: Indazole Sulfonamides Targeting Inosine Monophosphate Dehydrogenase as Potential Leads against Mycobacterium tuberculosis.
ACS Infect Dis, 3, 2017
4Z17
DownloadVisualize
BU of 4z17 by Molmil
Thermostable enolase from Chloroflexus aurantiacus
Descriptor: Enolase, MAGNESIUM ION, PHOSPHOENOLPYRUVATE
Authors:Zadvornyy, O.A, Peters, J.W.
Deposit date:2015-03-26
Release date:2015-07-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Biochemical and Structural Characterization of Enolase from Chloroflexus aurantiacus: Evidence for a Thermophilic Origin.
Front Bioeng Biotechnol, 3, 2015
5K1L
DownloadVisualize
BU of 5k1l by Molmil
Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex
Descriptor: BENZIMIDAZOLE, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Moreno Chicano, T, Hough, M.A.
Deposit date:2016-05-18
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex
to be published
6VFR
DownloadVisualize
BU of 6vfr by Molmil
Crystal structure of human protocadherin 18 EC1-EC4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Harrison, O.J, Brasch, J, Shapiro, L.
Deposit date:2020-01-06
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Family-wide Structural and Biophysical Analysis of Binding Interactions among Non-clustered delta-Protocadherins.
Cell Rep, 30, 2020

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon