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4JP5
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BU of 4jp5 by Molmil
X-ray structure of uridine phosphorylase from Yersinia pseudotuberculosis in unliganded state at 2.27 A resolution
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Balaev, V.V, Lashkov, A.A, Prokofev, I.I, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2013-03-19
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:X-ray structure of uridine phosphorylase from Yersinia pseudotuberculosis in unliganded state at 2.27 A resolution
To be Published
2OC4
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BU of 2oc4 by Molmil
Crystal structure of human purine nucleoside phosphorylase mutant H257D with Imm-H
Descriptor: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Rinaldo-Matthis, A, Almo, S.C, Schramm, V.L.
Deposit date:2006-12-20
Release date:2007-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.592 Å)
Cite:Neighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase
Biochemistry, 46, 2007
3FST
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BU of 3fst by Molmil
Crystal Structure of Escherichia coli Methylenetetrahydrofolate Reductase Mutant Phe223Leu at pH 7.4
Descriptor: 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, MESO-ERYTHRITOL, ...
Authors:Tanner, J.J.
Deposit date:2009-01-12
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Functional role for the conformationally mobile phenylalanine 223 in the reaction of methylenetetrahydrofolate reductase from Escherichia coli.
Biochemistry, 48, 2009
3G59
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BU of 3g59 by Molmil
Crystal Structure of Candida glabrata FMN Adenylyltransferase in complex with ATP
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, FMN Adenylyltransferase, ...
Authors:Huerta, C, Zhang, H.
Deposit date:2009-02-04
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure and mechanism of a eukaryotic FMN adenylyltransferase.
J.Mol.Biol., 389, 2009
3N3J
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BU of 3n3j by Molmil
Crystal structure of human carbonic anhydrase II in complex with a benzenesulfonamide inhibitor
Descriptor: 4-({[2-(1-methylethyl)phenyl]carbamoyl}amino)benzenesulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Avvaru, B.S, Wagner, J, Robbins, A.H, McKenna, R.
Deposit date:2010-05-20
Release date:2011-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Selective hydrophobic pocket binding observed within the carbonic anhydrase II active site accommodate different 4-substituted-ureido-benzenesulfonamides and correlate to inhibitor potency.
Chem.Commun.(Camb.), 46, 2010
3N45
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BU of 3n45 by Molmil
Human FPPS complex with FBS_04 and zoledronic acid/MG2+
Descriptor: (2S)-1-[(benzyloxy)carbonyl]-2,3-dihydro-1H-indole-2-carboxylic acid, FARNESYL PYROPHOSPHATE SYNTHASE, MAGNESIUM ION, ...
Authors:Rondeau, J.-M.
Deposit date:2010-05-21
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Allosteric non-bisphosphonate FPPS inhibitors identified by fragment-based discovery.
Nat.Chem.Biol., 6, 2010
4MGG
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BU of 4mgg by Molmil
Crystal structure of an enolase (mandelate racemase subgroup) from labrenzia aggregata iam 12614 (target nysgrc-012903) with bound mg, space group p212121
Descriptor: CHLORIDE ION, MAGNESIUM ION, Muconate lactonizing enzyme, ...
Authors:Vetting, M.W, Zhang, X, Wasserman, S.R, Morisco, L.L, Sojitra, S, Bonanno, J.B, Gerlt, J.A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-28
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of an enolase (mandelate racemase subgroup) from labrenzia aggregata iam 12614 (target nysgrc-012903) with bound mg, space group p212121
To be Published
3G6K
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BU of 3g6k by Molmil
Crystal Structure of Candida glabrata FMN Adenylyltransferase in complex with FAD and Inorganic Pyrophosphate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FMN adenylyltransferase, MAGNESIUM ION, ...
Authors:Huerta, C, Machius, M, Zhang, H.
Deposit date:2009-02-06
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure and mechanism of a eukaryotic FMN adenylyltransferase.
J.Mol.Biol., 389, 2009
2OEX
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BU of 2oex by Molmil
Structure of ALIX/AIP1 V Domain
Descriptor: Programmed cell death 6-interacting protein
Authors:Fisher, R.D, Zhai, Q, Robinson, H, Hill, C.P.
Deposit date:2007-01-01
Release date:2007-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural and Biochemical Studies of ALIX/AIP1 and Its Role in Retrovirus Budding
Cell(Cambridge,Mass.), 128, 2007
4JR6
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BU of 4jr6 by Molmil
Crystal structure of DsbA from Mycobacterium tuberculosis (reduced)
Descriptor: Possible conserved membrane or secreted protein, SULFATE ION
Authors:Wang, L.
Deposit date:2013-03-21
Release date:2013-07-17
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structure analysis of the extracellular domain reveals disulfide bond forming-protein properties of Mycobacterium tuberculosis Rv2969c.
Protein Cell, 4, 2013
4M1F
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BU of 4m1f by Molmil
X-ray crystal structure of E. coli apo NrdF
Descriptor: Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2013-08-02
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of E. coli apo NrdF
To be Published
4JB1
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BU of 4jb1 by Molmil
Crystal structure of P. aeruginosa MurB in complex with NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Chen, M.W, Lohkamp, B, Schnell, R, Lescar, J, Schneider, G.
Deposit date:2013-02-19
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate Channel Flexibility in Pseudomonas aeruginosa MurB Accommodates Two Distinct Substrates.
Plos One, 8, 2013
2OSE
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BU of 2ose by Molmil
Crystal Structure of the Mimivirus Cyclophilin
Descriptor: CHLORIDE ION, Probable peptidyl-prolyl cis-trans isomerase
Authors:Eisenmesser, E.Z, Thai, V, Renesto, P, Raoult, D.
Deposit date:2007-02-05
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural, biochemical, and in vivo characterization of the first virally encoded cyclophilin from the Mimivirus.
J.Mol.Biol., 378, 2008
2PER
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BU of 2per by Molmil
Crystal Structure of Human Chloride Intracellular Channel protein 2
Descriptor: 5-MERCAPTO-2-NITRO-BENZOIC ACID, Chloride intracellular channel protein 2
Authors:Su, X.D, Liang, Y.H, Mi, W.
Deposit date:2007-04-03
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of human chloride intracellular channel protein 2: A disulfide bond with functional implications.
Proteins, 71, 2008
3FXL
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BU of 3fxl by Molmil
Crystal Structure of Human Protein phosphatase 1A (PPM1A) Bound with Citrate at 1 mM of Mn2+
Descriptor: CITRATE ANION, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Hu, T, Wang, L, Wang, K, Jiang, H, Shen, X.
Deposit date:2009-01-21
Release date:2010-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the Mn2+-dependent activation of human PPM1A
To be published
4LYK
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BU of 4lyk by Molmil
Crystal structure of the EAL domain of c-di-GMP specific phosphodiesterase YahA in complex with activating cofactor Mg++
Descriptor: 1,2-ETHANEDIOL, Cyclic di-GMP phosphodiesterase YahA, MAGNESIUM ION, ...
Authors:Sundriyal, A, Schirmer, T.
Deposit date:2013-07-31
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inherent Regulation of EAL Domain-catalyzed Hydrolysis of Second Messenger Cyclic di-GMP.
J.Biol.Chem., 289, 2014
3N5H
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BU of 3n5h by Molmil
Human fpps complex with NOV_304
Descriptor: 3-(carboxymethyl)-4,7-dichloro-1H-indole-2-carboxylic acid, FARNESYL PYROPHOSPHATE SYNTHASE, PHOSPHATE ION
Authors:Rondeau, J.-M.
Deposit date:2010-05-25
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Allosteric non-bisphosphonate FPPS inhibitors identified by fragment-based discovery.
Nat.Chem.Biol., 6, 2010
2OSO
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BU of 2oso by Molmil
Crystal structure of a vinyl-4-reductase family protein (mj_1460) from methanocaldococcus jannaschii dsm at 1.90 A resolution
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-02-06
Release date:2007-02-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of hypothetical protein MJ_1460 (1592102) from Methanocaldococcus jannaschii at 1.90 A resolution
To be published
3FQD
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BU of 3fqd by Molmil
Crystal Structure of the S. pombe Rat1-Rai1 Complex
Descriptor: 5'-3' exoribonuclease 2, GLYCEROL, MAGNESIUM ION, ...
Authors:Xiang, S, Tong, L.
Deposit date:2009-01-07
Release date:2009-02-03
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1.
Nature, 458, 2009
4JSV
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BU of 4jsv by Molmil
mTOR kinase structure, mechanism and regulation.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Serine/threonine-protein kinase mTOR, ...
Authors:Pavletich, N.P, Yang, H.
Deposit date:2013-03-22
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:mTOR kinase structure, mechanism and regulation.
Nature, 497, 2013
2ORW
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BU of 2orw by Molmil
Thermotoga maritima thymidine kinase 1 like enzyme in complex with TP4A
Descriptor: MAGNESIUM ION, P1-(5'-ADENOSYL)P4-(5'-(2'-DEOXY-THYMIDYL))TETRAPHOSPHATE, Thymidine kinase, ...
Authors:Segura-Pena, D, Lutz, S, Monnerjahn, C, Konrad, M, Lavie, A.
Deposit date:2007-02-04
Release date:2007-03-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding of ATP to TK1-like Enzymes Is Associated with a Conformational Change in the Quaternary Structure.
J.Mol.Biol., 369, 2007
2OTB
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BU of 2otb by Molmil
Crystal structure of a monomeric cyan fluorescent protein in the fluorescent state
Descriptor: GFP-like fluorescent chromoprotein cFP484
Authors:Henderson, J.N, Ai, H, Campbell, R.E, Remington, S.J.
Deposit date:2007-02-07
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis for reversible photobleaching of a green fluorescent protein homologue.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3N6K
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BU of 3n6k by Molmil
Human FPPS complex with NOV_823
Descriptor: 1-(carboxymethyl)-1H-benzo[g]indole-2-carboxylic acid, FARNESYL PYROPHOSPHATE SYNTHASE, PHOSPHATE ION
Authors:Rondeau, J.-M.
Deposit date:2010-05-26
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Allosteric non-bisphosphonate FPPS inhibitors identified by fragment-based discovery.
Nat.Chem.Biol., 6, 2010
4JTJ
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BU of 4jtj by Molmil
Crystal structure of R117K mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION, SODIUM ION
Authors:Allison, T.M, Cochrane, F.C, Jameson, G.B, Parker, E.J.
Deposit date:2013-03-23
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase.
Biochemistry, 52, 2013
4M30
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BU of 4m30 by Molmil
Crystal structure of RNASE III complexed with double-stranded RNA AND AMP (TYPE II CLEAVAGE)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Gan, J, Liang, Y.-H, Shaw, G.X, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2013-08-05
Release date:2013-12-11
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:RNase III: Genetics and Function; Structure and Mechanism.
Annu. Rev. Genet., 47, 2013

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