Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YIZ
DownloadVisualize
BU of 7yiz by Molmil
Crystal structure of anti-mPEG h15-2b Fab W104Y mutant
Descriptor: 15-2b W104Y heavy chain, 15-2b light chain, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL
Authors:Chang, C.Y, Nguyen, T.M.T, Li, Y.C, Su, Y.C.
Deposit date:2022-07-18
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of anti-mPEG h15-2b Fab W104Y mutant
To Be Published
7Y0O
DownloadVisualize
BU of 7y0o by Molmil
Interface of SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Descriptor: P14 nanobody, Spike protein S1, heavy chain of R15, ...
Authors:Wang, L.
Deposit date:2022-06-05
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
To Be Published
7Y0N
DownloadVisualize
BU of 7y0n by Molmil
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R15-F7, ...
Authors:Wang, L.
Deposit date:2022-06-05
Release date:2023-09-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
To Be Published
7BNQ
DownloadVisualize
BU of 7bnq by Molmil
Lateral-closed conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) by cryoEM
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Haysom, S.F.
Deposit date:2021-01-22
Release date:2021-06-02
Last modified:2021-07-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding.
Nat Commun, 12, 2021
5ANS
DownloadVisualize
BU of 5ans by Molmil
Potent and selective inhibitors of MTH1 probe its role in cancer cell survival
Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Authors:Kettle, J.G, Alwan, H, Bista, M, Breed, J, Kack, H, Eckersley, K, Foote, K.M, Fillery, S, Goodwin, L, Jones, D, Lau, A, Nissink, J.W.M, Read, J, Scott, J, Taylor, B, Walker, G, Wissler, L.
Deposit date:2015-09-08
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
5ANT
DownloadVisualize
BU of 5ant by Molmil
Potent and selective inhibitors of MTH1 probe its role in cancer cell survival
Descriptor: 2-(2-methoxyethoxy)-6-(methylamino)-9-(phenylmethyl)-7H-purin-8-one, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Authors:Kettle, J.G, Alwan, H, Bista, M, Breed, J, Kack, H, Eckersley, K, Foote, K.M, Fillery, S, Goodwin, L, Jones, D, Lau, A, Nissink, J.W.M, Read, J, Scott, J, Taylor, B, Walker, G, Wissler, L.
Deposit date:2015-09-08
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
8AZU
DownloadVisualize
BU of 8azu by Molmil
Paired helical tau filaments from high-spin supernatants of aqueous extracts from Alzheimer's disease brains | PHF Tau
Descriptor: Microtubule-associated protein tau
Authors:Yang, Y, Stern, M.A, Meunier, L.A, Liu, W, Cai, Y.Q, Ericsson, M, Liu, L, Selkoe, J.D, Goedert, M, Scheres, H.W.S.
Deposit date:2022-09-06
Release date:2023-05-24
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Abundant A beta fibrils in ultracentrifugal supernatants of aqueous extracts from Alzheimer's disease brains.
Neuron, 111, 2023
7CN2
DownloadVisualize
BU of 7cn2 by Molmil
Subparticle refinement of human papillomavirus type 16 pesudovirus in complex with H16.001 Fab
Descriptor: Major capsid protein L1, The heavy chain variable region of H16.001 Fab fragment, The light chain variable region of H16.001 Fab fragment
Authors:He, M.Z, Li, S.W.
Deposit date:2020-07-29
Release date:2020-09-02
Last modified:2021-03-17
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Structural characterization of a neutralizing mAb H16.001, a potent candidate for a common potency assay for various HPV16 VLPs.
Npj Vaccines, 5, 2020
7C2S
DownloadVisualize
BU of 7c2s by Molmil
Helical reconstruction of Dengue virus serotype 3 complexed with Fab C10
Descriptor: Heavy chain of Fab C10, envelope protein, light chain of Fab C10
Authors:Morrone, S, Chew, S.V, Lim, X.N, Ng, T.S, Kostyuchenko, V.A, Zhang, S, Lok, S.M.
Deposit date:2020-05-09
Release date:2020-07-08
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (10.4 Å)
Cite:High flavivirus structural plasticity demonstrated by a non-spherical morphological variant.
Nat Commun, 11, 2020
7C2T
DownloadVisualize
BU of 7c2t by Molmil
Helical reconstruction of Zika virus complexed with Fab C10
Descriptor: Heavy chain from Fab C10, Light chain from Fab C10, M protein, ...
Authors:Morrone, S, Chew, S.V, Lim, X.N, Ng, T.S, Kostyuchenko, V.A, Zhang, S, Lok, S.M.
Deposit date:2020-05-09
Release date:2020-07-08
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (9.4 Å)
Cite:High flavivirus structural plasticity demonstrated by a non-spherical morphological variant.
Nat Commun, 11, 2020
4ZXB
DownloadVisualize
BU of 4zxb by Molmil
Structure of the human insulin receptor ectodomain, IRDeltabeta construct, in complex with four Fab molecules
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Croll, T, Smith, B.J, Margetts, M.B, Whittaker, J, Weiss, M.A, Ward, C.W, Lawrence, M.C.
Deposit date:2015-05-20
Release date:2016-02-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Higher-Resolution Structure of the Human Insulin Receptor Ectodomain: Multi-Modal Inclusion of the Insert Domain.
Structure, 24, 2016
8KG5
DownloadVisualize
BU of 8kg5 by Molmil
Prefusion RSV F Bound to Lonafarnib and D25 Fab
Descriptor: 4-{2-[4-(3,10-DIBROMO-8-CHLORO-6,11-DIHYDRO-5H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDIN-11-YL)PIPERIDIN-1-YL]-2-OXOETHYL}PIPERIDINE-1-CARBOXAMIDE, D25 heavy chain, D25 light chain, ...
Authors:Yang, Q, Xue, B, Liu, F, Peng, W, Chen, X.
Deposit date:2023-08-17
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Farnesyltransferase inhibitor lonafarnib suppresses respiratory syncytial virus infection by blocking conformational change of fusion glycoprotein.
Signal Transduct Target Ther, 9, 2024
8K33
DownloadVisualize
BU of 8k33 by Molmil
SOD1 and Nanobody1 complex
Descriptor: NB1, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Cheng, S.
Deposit date:2023-07-14
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:SOD1 and Nanobody1 complex
To Be Published
8K3A
DownloadVisualize
BU of 8k3a by Molmil
SOD1 and Nanobody2 complex
Descriptor: NB2, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Cheng, S.
Deposit date:2023-07-14
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:SOD1 and Nanobody1 complex
To Be Published
8K3L
DownloadVisualize
BU of 8k3l by Molmil
SOD1 and Nanobody3 complex
Descriptor: COPPER (II) ION, NB3, Superoxide dismutase [Cu-Zn], ...
Authors:Cheng, S, Liu, R, Ding, Y.
Deposit date:2023-07-16
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SOD1 and Nanobody1 complex
To Be Published
5DC4
DownloadVisualize
BU of 5dc4 by Molmil
CRYSTAL STRUCTURE OF MONOBODY AS25/ABL1 SH2 DOMAIN COMPLEX, CRYSTAL A
Descriptor: AS25 monobody, GLYCEROL, Tyrosine-protein kinase ABL1
Authors:Wojcik, J.B, Koide, A, Koide, S.
Deposit date:2015-08-23
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface.
J.Biol.Chem., 291, 2016
5D3G
DownloadVisualize
BU of 5d3g by Molmil
Structure of HIV-1 Reverse Transcriptase Bound to a Novel 38-mer Hairpin Template-Primer DNA Aptamer
Descriptor: DNA aptamer (38-MER), GLYCEROL, HIV-1 REVERSE TRANSCRIPTASE P51 subunit, ...
Authors:Miller, M.T, Tuske, S, Das, K, Arnold, E.
Deposit date:2015-08-06
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of HIV-1 reverse transcriptase bound to a novel 38-mer hairpin template-primer DNA aptamer.
Protein Sci., 25, 2016
5D6K
DownloadVisualize
BU of 5d6k by Molmil
PepT - CIM
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, Di-or tripeptide:H+ symporter, ...
Authors:Ma, P, Caffrey, M.
Deposit date:2015-08-12
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The cubicon method for concentrating membrane proteins in the cubic mesophase.
Nat Protoc, 12, 2017
5D6I
DownloadVisualize
BU of 5d6i by Molmil
DgkA - CIM
Descriptor: Diacylglycerol kinase
Authors:Ma, P, Caffrey, M.
Deposit date:2015-08-12
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.091 Å)
Cite:The cubicon method for concentrating membrane proteins in the cubic mesophase.
Nat Protoc, 12, 2017
5DC0
DownloadVisualize
BU of 5dc0 by Molmil
CRYSTAL STRUCTURE OF MONOBODY GG3/ABL1 SH2 DOMAIN COMPLEX
Descriptor: Fibronectin, Tyrosine-protein kinase ABL1
Authors:Wojcik, J.B, Grabe, G, Koide, S.
Deposit date:2015-08-22
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface.
J.Biol.Chem., 291, 2016
5DC9
DownloadVisualize
BU of 5dc9 by Molmil
CRYSTAL STRUCTURE OF MONOBODY AS25/ABL1 SH2 DOMAIN COMPLEX, CRYSTAL B
Descriptor: AS25 monobody, GLYCEROL, IMIDAZOLE, ...
Authors:Wojcik, J.B, Koide, A, Koide, S.
Deposit date:2015-08-23
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface.
J.Biol.Chem., 291, 2016
5D6L
DownloadVisualize
BU of 5d6l by Molmil
beta2AR-T4L - CIM
Descriptor: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, 1,4-BUTANEDIOL, ACETAMIDE, ...
Authors:Ma, P, Caffrey, M.
Deposit date:2015-08-12
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The cubicon method for concentrating membrane proteins in the cubic mesophase.
Nat Protoc, 12, 2017
7P57
DownloadVisualize
BU of 7p57 by Molmil
VSG2 mutant structure lacking the calcium binding pocket
Descriptor: Variant surface glycoprotein MITAT 1.2, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Immunodominant surface epitopes power immune evasion in the African trypanosome.
Cell Rep, 42, 2023
7P59
DownloadVisualize
BU of 7p59 by Molmil
Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) with two O-linked post-translational modifications
Descriptor: Variant surface glycoprotein, alpha-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Gkeka, A, Arest-Branco, F, Stebbins, C.E, Papavasiliou, F.N.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Immunodominant surface epitopes power immune evasion in the African trypanosome.
Cell Rep, 42, 2023
7P5B
DownloadVisualize
BU of 7p5b by Molmil
Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 319 to alanine), single O-linked glycosylated at Ser317
Descriptor: Variant surface glycoprotein, alpha-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Immunodominant surface epitopes power immune evasion in the African trypanosome.
Cell Rep, 42, 2023

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon