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3HY0
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BU of 3hy0 by Molmil
Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with GlySA
Descriptor: 2-HYDROXYETHYL DISULFIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-(glycylsulfamoyl)adenosine, ...
Authors:Guo, M, Yang, X.-L, Schimmel, P.
Deposit date:2009-06-22
Release date:2009-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma.
Nature, 462, 2009
5BS6
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BU of 5bs6 by Molmil
Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI
Descriptor: 1,2-ETHANEDIOL, transcriptional regulator AraR
Authors:Chang, C, Tesar, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-06-01
Release date:2015-06-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A novel transcriptional regulator of L-arabinose utilization in human gut bacteria.
Nucleic Acids Res., 43, 2015
4POB
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BU of 4pob by Molmil
Crystal structure of a thioredoxin Rv1471 ortholog from Mycobacterium abscessus
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, Thioredoxin
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-02-25
Release date:2014-03-05
Last modified:2025-10-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a thioredoxin Rv1471 ortholog from Mycobacterium abscessus
To be Published
5XMW
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BU of 5xmw by Molmil
Selenomethionine-derivated ZHD
Descriptor: Zearalenone lactonase
Authors:Hu, X.J.
Deposit date:2017-05-16
Release date:2018-04-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of a complex of the lactonohydrolase zearalenone hydrolase with the hydrolysis product of zearalenone at 1.60 angstrom resolution
Acta Crystallogr F Struct Biol Commun, 73, 2017
3HWW
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BU of 3hww by Molmil
Crystal structure of menaquinone synthesis protein MenD from E. coli in complex with oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, CHLORIDE ION, ...
Authors:Priyadarshi, A, Hwang, K.Y.
Deposit date:2009-06-19
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional analysis of Vitamin K2 synthesis protein MenD.
Biochem.Biophys.Res.Commun., 388, 2009
5RXN
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BU of 5rxn by Molmil
COMBINED CRYSTALLOGRAPHIC REFINEMENT AND ENERGY MINIMIZATION OF RUBREDOXIN AT 1.2 ANGSTROM RESOLUTION
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Watenpaugh, K.D.
Deposit date:1984-10-15
Release date:1985-04-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Combined Crystallographic Refinement and Energy Minimization of Rubredoxin at 1.2 Angstrom Resolution
To be Published
5S8M
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BU of 5s8m by Molmil
XChem group deposition -- Crystal Structure of the second bromodomain of pleckstrin homology domain interacting protein (PHIP) in complex with N11511a (space group C2)
Descriptor: 1-BENZYL-1H-IMIDAZOLE, PH-interacting protein
Authors:Krojer, T, Talon, R, Fairhead, M, Szykowska, A, Burgess-Brown, N.A, Brennan, P.E, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F.
Deposit date:2020-12-17
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:XChem group deposition
To Be Published
2XL3
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BU of 2xl3 by Molmil
WDR5 IN COMPLEX WITH AN RBBP5 PEPTIDE AND HISTONE H3 PEPTIDE
Descriptor: GLYCEROL, HISTONE H3.1, RETINOBLASTOMA-BINDING PROTEIN 5, ...
Authors:Odho, Z, Southall, S.M, Wilson, J.R.
Deposit date:2010-07-19
Release date:2010-08-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterisation of a Novel Wdr5 Binding Site that Recruits Rbbp5 Through a Conserved Motif and Enhances Methylation of H3K4 by Mll1.
J.Biol.Chem., 285, 2010
6T2P
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BU of 6t2p by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 16
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
3I4W
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BU of 3i4w by Molmil
Crystal Structure of the third PDZ domain of PSD-95
Descriptor: ACETATE ION, Disks large homolog 4
Authors:Camara-Artigas, A, Gavira, J.A.
Deposit date:2009-07-03
Release date:2010-04-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Novel conformational aspects of the third PDZ domain of the neuronal post-synaptic density-95 protein revealed from two 1.4A X-ray structures
J.Struct.Biol., 170, 2010
3I60
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BU of 3i60 by Molmil
Crystal structure of ERK2 bound to (S)-4-(2-(2-chlorophenylamino)-5-methylpyrimidin-4-yl)-N-(2-hydroxy-1-phenylethyl)-1H-pyrrole-2-carboxamide
Descriptor: 4-{2-[(2-chlorophenyl)amino]-5-methylpyrimidin-4-yl}-N-[(1S)-2-hydroxy-1-phenylethyl]-1H-pyrrole-2-carboxamide, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Jacobs, M.D, Xie, X.
Deposit date:2009-07-06
Release date:2010-01-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-guided design of potent and selective pyrimidylpyrrole inhibitors of extracellular signal-regulated kinase (ERK) using conformational control.
J.Med.Chem., 52, 2009
5BQN
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BU of 5bqn by Molmil
Crystal structure of the LHn fragment of botulinum neurotoxin type D, mutant H233Y E230Q
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Botulinum neurotoxin type D,Botulinum neurotoxin type D
Authors:Masuyer, G, Davies, J.R, Moore, K, Chaddock, J.A, Acharya, K.R.
Deposit date:2015-05-29
Release date:2015-08-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of Clostridium botulinum neurotoxin type D as a platform for the development of targeted secretion inhibitors.
Sci Rep, 5, 2015
5S8G
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BU of 5s8g by Molmil
XChem group deposition -- Crystal Structure of the second bromodomain of pleckstrin homology domain interacting protein (PHIP) in complex with N00804d (space group C2)
Descriptor: 1,3-benzothiazole-6-carboxylic acid, PH-interacting protein
Authors:Krojer, T, Talon, R, Fairhead, M, Szykowska, A, Burgess-Brown, N.A, Brennan, P.E, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F.
Deposit date:2020-12-17
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:XChem group deposition
To Be Published
5XVA
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BU of 5xva by Molmil
Crystal Structure of PAK4 in complex with inhibitor CZH216
Descriptor: ETHANOL, Serine/threonine-protein kinase PAK 4, [6-chloranyl-4-[(5-methyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl]-[(3R)-3-methylpiperazin-1-yl]methanone
Authors:Zhao, F, Li, H.
Deposit date:2017-06-27
Release date:2018-02-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.847 Å)
Cite:Structure-Based Design of 6-Chloro-4-aminoquinazoline-2-carboxamide Derivatives as Potent and Selective p21-Activated Kinase 4 (PAK4) Inhibitors.
J. Med. Chem., 61, 2018
4QC3
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BU of 4qc3 by Molmil
Crystal structure of human BAZ2B bromodomain in complex with a diacetylated histone 4 peptide (H4K8acK12ac)
Descriptor: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B, diacetylated histone 4 peptide (H4K8acK12ac)
Authors:Tallant, C, Jose, B, Picaud, S, Chaikuad, A, Filippakopoulos, P, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-05-09
Release date:2014-05-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular basis of histone tail recognition by human TIP5 PHD finger and bromodomain of the chromatin remodeling complex NoRC.
Structure, 23, 2015
4C1Q
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BU of 4c1q by Molmil
Crystal structure of the PRDM9 SET domain in complex with H3K4me2 and AdoHcy.
Descriptor: GLYCEROL, HISTONE H3.1, HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9, ...
Authors:Mathioudakis, N, Cusack, S, Kadlec, J.
Deposit date:2013-08-13
Release date:2013-10-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for the Regulation of the H3K4 Methyltransferase Activity of Prdm9.
Cell Rep., 5, 2013
4I4E
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BU of 4i4e by Molmil
Structure of Focal Adhesion Kinase catalytic domain in complex with hinge binding pyrazolobenzothiazine compound.
Descriptor: Focal adhesion kinase 1, [4-(2-hydroxyethyl)piperidin-1-yl][4-(5-methyl-4,4-dioxido-1,5-dihydropyrazolo[4,3-c][2,1]benzothiazin-8-yl)phenyl]methanone
Authors:Skene, R.J, Hosfield, D.J.
Deposit date:2012-11-27
Release date:2013-03-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-based discovery of cellular-active allosteric inhibitors of FAK.
Bioorg.Med.Chem.Lett., 23, 2013
3HVI
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BU of 3hvi by Molmil
Rat catechol O-methyltransferase in complex with a catechol-type, N6-ethyladenine-containing bisubstrate inhibitor
Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, CHLORIDE ION, Catechol O-methyltransferase, ...
Authors:Ehler, A, Schlatter, D, Stihle, M, Benz, J, Rudolph, M.G.
Deposit date:2009-06-16
Release date:2009-10-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Molecular recognition at the active site of catechol-o-methyltransferase: energetically favorable replacement of a water molecule imported by a bisubstrate inhibitor.
Angew.Chem.Int.Ed.Engl., 48, 2009
4PXL
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BU of 4pxl by Molmil
Structure of Zm ALDH2-3 (RF2C) in complex with NAD
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cytosolic aldehyde dehydrogenase RF2C, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2014-03-24
Release date:2015-03-18
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015
3HXU
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BU of 3hxu by Molmil
Crystal Structure of catalytic fragment of E. coli AlaRS in complex with AlaSA
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, 2-HYDROXYETHYL DISULFIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Guo, M, Yang, X.-L, Schimmel, P.
Deposit date:2009-06-22
Release date:2009-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma.
Nature, 462, 2009
1NBP
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BU of 1nbp by Molmil
Crystal Structure Of Human Interleukin-2 Y31C Covalently Modified At C31 With 3-Mercapto-1-(1,3,4,9-tetrahydro-B-carbolin-2-yl)-propan-1-one
Descriptor: 3-MERCAPTO-1-(1,3,4,9-TETRAHYDRO-B-CARBOLIN-2-YL)-PROPAN-1-ONE, Interleukin-2, SULFATE ION
Authors:Hyde, J, Braisted, A.C, Randal, M, Arkin, M.R.
Deposit date:2002-12-03
Release date:2002-12-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery and characterization of cooperative ligand binding in the adaptive region of interleukin-2
Biochemistry, 42, 2003
5SBN
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BU of 5sbn by Molmil
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z57040482
Descriptor: 1,2-ETHANEDIOL, CD44 antigen, DIMETHYL SULFOXIDE, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.181 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
6DQ3
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BU of 6dq3 by Molmil
Streptococcus pyogenes deacetylase PplD in complex with acetate
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, IMIDAZOLE, ...
Authors:Li, J, Korotkova, N, Korotkov, K.V.
Deposit date:2018-06-10
Release date:2019-05-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:PplD is a de-N-acetylase of the cell wall linkage unit of streptococcal rhamnopolysaccharides
Nat Commun, 13, 2022
5SBL
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BU of 5sbl by Molmil
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z126932614
Descriptor: 1,2-ETHANEDIOL, 2-[(methylsulfonyl)methyl]-1H-benzimidazole, CD44 antigen, ...
Authors:Bradshaw, W.J, Katis, V.L, Bezerra, G.A, Koekemoer, L, von Delft, F, Bountra, C, Brennan, P.E, Gileadi, O.
Deposit date:2021-09-14
Release date:2021-09-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.198 Å)
Cite:CD44 PanDDA analysis group deposition
To Be Published
3FCN
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BU of 3fcn by Molmil
Crystal structure of an alpha-helical protein of unknown function (rru_a3208) from rhodospirillum rubrum atcc 11170 at 1.45 A resolution
Descriptor: an alpha-helical protein of unknown function (Pfam01724)
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-11-21
Release date:2008-12-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of an alpha-helical protein of unknown function (Pfam01724) (YP_428290.1) from RHODOSPIRILLUM RUBRUM ATCC 11170 at 1.45 A resolution
To be published

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