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5JC9
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BU of 5jc9 by Molmil
Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ...
Authors:Cocozaki, A, Ferguson, A.
Deposit date:2016-04-14
Release date:2016-07-06
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JGW
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BU of 5jgw by Molmil
Crystal structure of maize AKR4C13 in complex with NADP and acetate
Descriptor: ACETATE ION, Aldose reductase, AKR4C13, ...
Authors:Santos, M.L, Giuseppe, P.O, Kiyota, E, Sousa, S.M, Schmelz, E.A, Yunes, J.A, Koch, K.E, Murakami, M.T, Aparicio, R.
Deposit date:2016-04-20
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of maize AKR4C13 in complex with NADP and acetate
To Be Published
8ZWF
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BU of 8zwf by Molmil
cryoEM structure of JR14a bound C3aR-BRIL-BAG2 complex
Descriptor: (2~{S})-5-[bis(azanyl)methylideneamino]-2-[[5-[bis(4-chlorophenyl)methyl]-3-methyl-thiophen-2-yl]carbonylamino]pentanoic acid, Beta-2 adrenergic receptor,C3a anaphylatoxin chemotactic receptor,Soluble cytochrome b562, anti-BRIL Fab HC, ...
Authors:Luo, P, Xu, Y, Xu, H.E.
Deposit date:2024-06-13
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the agonist activity of the nonpeptide modulator JR14a on C3aR.
Cell Discov, 11, 2025
1KLF
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BU of 1klf by Molmil
FIMH ADHESIN-FIMC CHAPERONE COMPLEX WITH D-MANNOSE
Descriptor: CHAPERONE PROTEIN FIMC, FIMH PROTEIN, alpha-D-mannopyranose
Authors:Hung, C.S, Bouckaert, J.
Deposit date:2001-12-11
Release date:2002-06-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis of tropism of Escherichia coli to the bladder during urinary tract infection.
Mol.Microbiol., 44, 2002
2V53
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BU of 2v53 by Molmil
Crystal structure of a SPARC-collagen complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COLLAGEN ALPHA-1(III) CHAIN, ...
Authors:Hohenester, E, Sasaki, T, Giudici, C, Farndale, R.W, Bachinger, H.P.
Deposit date:2008-10-01
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Sequence-Specific Collagen Recognition by Sparc.
Proc.Natl.Acad.Sci.USA, 105, 2008
8ZEF
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BU of 8zef by Molmil
Crystal structure of Staphylococcus aureus DinG protein in complex with ssDNA and Ca2+
Descriptor: 3'-5' exonuclease DinG, CALCIUM ION, DNA (5'-D(*TP*TP*TP*TP*TP*TP*T)-3'), ...
Authors:Cheng, K, Gao, T, Hao, W.
Deposit date:2024-05-06
Release date:2025-05-21
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Structure of Staphylococcus aureus DinG
To Be Published
8ZGZ
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BU of 8zgz by Molmil
Cryo-EM structure of inward state Anhydromuropeptide permease (AmpG)
Descriptor: Protein AmpG
Authors:Cho, H.S, Kim, U, Chang, N, Kim, H, Yoo, Y.
Deposit date:2024-05-10
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Cryo-EM structure of inward state Anhydromuropeptide permease (AmpG)
To Be Published
8ZK9
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BU of 8zk9 by Molmil
Crystal structure of the Decarboxylase KDC4427 mutant E468L in complex with phenylpyruvic acid
Descriptor: 3-PHENYLPYRUVIC ACID, Indolepyruvate decarboxylase, MAGNESIUM ION, ...
Authors:Dong, S, Liu, L, Zhang, H.
Deposit date:2024-05-15
Release date:2025-05-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of the Decarboxylase KDC4427 mutant E468L in complex with indole-3-pyruvic acid
To Be Published
8ZCI
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BU of 8zci by Molmil
X-ray structure of the human heart fatty acid-binding protein complexed with R-Ibuprofen
Descriptor: (2R)-2-[4-(2-methylpropyl)phenyl]propanoic acid, ACETIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Sugiyama, S, Tanaka, J, Matsuoka, S, Murata, M.
Deposit date:2024-04-29
Release date:2025-04-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:X-ray structure of the human heart fatty acid-binding protein complexed with R-Ibuprofen
To Be Published
2V5E
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BU of 2v5e by Molmil
The structure of the GDNF:Coreceptor complex: Insights into RET signalling and heparin binding.
Descriptor: 1,2-ETHANEDIOL, 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Parkash, V, Leppanen, V.-M, Virtanen, H, Jurvansuu, J.-M, Bespalov, M.M, Sidorova, Y.A, Runeberg-Roos, P, Saarma, M, Goldman, A.
Deposit date:2008-10-03
Release date:2008-10-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Structure of the Glial Cell Line-Derived Neurotrophic Factor-Coreceptor Complex: Insights Into Ret Signaling and Heparin Binding.
J.Biol.Chem., 283, 2008
2V5M
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BU of 2v5m by Molmil
Structural basis for Dscam isoform specificity
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DSCAM, GLYCEROL
Authors:Meijers, R, Puettmann-Holgado, R, Skiniotis, G, Liu, J.-H, Walz, T, Schmucker, D, Wang, J.-H.
Deposit date:2007-07-06
Release date:2007-09-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis of Dscam Isoform Specificity
Nature, 449, 2007
5JJI
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BU of 5jji by Molmil
Rho transcription termination factor bound to rU7 and 6 ADP-BeF3 molecules
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
Deposit date:2016-04-24
Release date:2016-11-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
9B0W
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BU of 9b0w by Molmil
In situ human eEF2-A/P-P/E state 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Wei, Z, Yong, Z.
Deposit date:2024-03-12
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:In situ human eEF2-A/P-P/E state 80S ribosome
To Be Published
8ZGY
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BU of 8zgy by Molmil
80S ribosome with P/E tRNA and mRNA of WNV
Descriptor: 25S rRNA (3393-MER), 5.8S rRNA (158-MER), 5S rRNA (121-MER), ...
Authors:Wu, M, Yuan, S.
Deposit date:2024-05-10
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Flexibilities and conservations in the structural basis of viral -1 programmed ribosomal frameshifting
To Be Published
6TC4
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BU of 6tc4 by Molmil
AA13 Lytic polysaccharide monooxygenase from Aspergillus oryzae measured with SSX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AoAA13, CHLORIDE ION, ...
Authors:Tandrup, T, Muderspach, S.J, Frandsen, K.E.H, Santoni, G, Poulsen, J.C.N, Lo Leggio, L.
Deposit date:2019-11-05
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Further structural studies of the lytic polysaccharide monooxygenase AoAA13 belonging to the starch-active AA13 family
Amylase, 3(1), 2019
5JKE
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BU of 5jke by Molmil
Crystal structure of human IZUMO1-JUNO complex (crystal form 3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Izumo sperm-egg fusion protein 1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
5JB9
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BU of 5jb9 by Molmil
Crystal structure of factor IXa K98T variant in complex with PPACK
Descriptor: CALCIUM ION, Coagulation factor IX, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
Authors:Kristensen, L.H, Brandstetter, H.
Deposit date:2016-04-13
Release date:2016-06-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Releasing the brakes in coagulation Factor IXa by co-operative maturation of the substrate-binding site.
Biochem.J., 473, 2016
8ZD8
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BU of 8zd8 by Molmil
NMR structure of the (CGG-dsDNA:ND=) 1:1 complex
Descriptor: DNA (5'-D(*CP*AP*TP*TP*CP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*AP*CP*GP*GP*AP*AP*TP*G)-3'), ~{N}-(7-methyl-1,8-naphthyridin-2-yl)-3-[[3-[(7-methyl-1,8-naphthyridin-2-yl)amino]-3-oxidanylidene-propyl]amino]propanamide
Authors:Sakurabayashi, S, Furuita, K, Yamada, T, Nomura, M, Nakatani, K, Kojima, C.
Deposit date:2024-05-01
Release date:2025-04-30
Method:SOLUTION NMR
Cite:NMR structure of the (CGG-dsDNA:ND=) 1:1 complex
To Be Published
2V3F
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BU of 2v3f by Molmil
acid-beta-glucosidase produced in carrot
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLUCOSYLCERAMIDASE, SULFATE ION, ...
Authors:Shaaltiel, Y, Bartfeld, D, Hashmueli, S, Baum, G, Brill-Almon, E, Galili, G, Dym, O, Boldin-Adamsky, S.A, Silman, I, Sussman, J.L, Futerman, A.H, Aviezer, D, Israel Structural Proteomics Center (ISPC)
Deposit date:2007-06-17
Release date:2008-04-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Production of Glucocerebrosidase with Terminal Mannose Glycans for Enzyme Replacement Therapy of Gaucher'S Disease Using a Plant Cell System.
Plant Biotechnol.J., 5, 2007
8ZEL
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BU of 8zel by Molmil
Crystal structure of human cytosolic beta-alanyl lysine dipeptidase Tyr314Phe mutant with a crystal soaked in beta-alanyl ornithine
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, L-ornithine, ...
Authors:Chandravanshi, K, Kumar, A, Makde, R.D.
Deposit date:2024-05-06
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human cytosolic beta-alanyl lysine dipeptidase Tyr314Phe mutant with a crystal soaked in beta-alanyl ornithine
To Be Published
2HZG
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BU of 2hzg by Molmil
Crystal structure of predicted Mandelate racemase from Rhodobacter sphaeroides
Descriptor: GLYCEROL, Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily, SODIUM ION
Authors:Ramagopal, U.A, Toro, R, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-08
Release date:2006-08-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of predicted Mandelate racemase from Rhodobacter sphaeroides
To be Published
8ZG4
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BU of 8zg4 by Molmil
Human Keratin 19 head domain S10E phosphomimetic mutant segment Y6-G16 in solution
Descriptor: Keratin, type I cytoskeletal 19
Authors:Ji, Y, Jeong, M, Kim, J, Lee, C.H.
Deposit date:2024-05-08
Release date:2025-05-14
Method:SOLUTION NMR
Cite:Human Keratin 19 head domain S10E phosphomimetic mutant segment Y6-G16 in solution
To Be Published
5JLP
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BU of 5jlp by Molmil
Crystal structure of Mycobacterium avium SerB2 in complex with serine at ACT domain
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, MAGNESIUM ION, ...
Authors:Shree, S, Ramachandran, R.
Deposit date:2016-04-27
Release date:2017-05-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Crystal structure of Mycobacterium avium SerB2 in complex with serine at ACT domain
To be published
8ZHU
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BU of 8zhu by Molmil
Structure of 3-amino-3-carboxyltransferase in complex with 5-thioadenosine in the biosynthesis of nocardicins
Descriptor: 5'-thioadenosine, Isonocardicin synthase
Authors:Gao, Y, Mori, T, Awakawa, T, Abe, I.
Deposit date:2024-05-11
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of 3-amino-3-carboxyltransferase in complex with 5-thioadenosine in the biosynthesis of nocardicins
To Be Published
8ZWG
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BU of 8zwg by Molmil
cryoEM structure of JR14a bound C3aR-Gi complex
Descriptor: (2~{S})-5-[bis(azanyl)methylideneamino]-2-[[5-[bis(4-chlorophenyl)methyl]-3-methyl-thiophen-2-yl]carbonylamino]pentanoic acid, Beta-2 adrenergic receptor,C3a anaphylatoxin chemotactic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Luo, P, Xu, Y, Xu, H.E.
Deposit date:2024-06-13
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Structural insights into the agonist activity of the nonpeptide modulator JR14a on C3aR.
Cell Discov, 11, 2025

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PDB entries from 2025-07-09

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