Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BP6
DownloadVisualize
BU of 7bp6 by Molmil
Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
Descriptor: Histone H2A.6, Histone H2B.1, NRP1-CTAD
Authors:Luo, Q, Baihui, W.
Deposit date:2020-03-21
Release date:2020-11-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BP2
DownloadVisualize
BU of 7bp2 by Molmil
Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
Descriptor: GLYCEROL, Histone H2A.6, Histone H2B.1, ...
Authors:Luo, Q, Baihui, W.
Deposit date:2020-03-21
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BP5
DownloadVisualize
BU of 7bp5 by Molmil
Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
Descriptor: ASN-ASP-PRO-ASP-TYR, GLYCEROL, Histone H2A.6, ...
Authors:Luo, Q, Baihui, W.
Deposit date:2020-03-21
Release date:2020-11-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
7CRP
DownloadVisualize
BU of 7crp by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (1:1 binding mode)
Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7CRO
DownloadVisualize
BU of 7cro by Molmil
NSD2 bearing E1099K/T1150A dual mutation in complex with 187-bp NCP
Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
6M2M
DownloadVisualize
BU of 6m2m by Molmil
A role for histone chaperone OsChz1 in histone recognition and deposition
Descriptor: Expressed protein, GLYCEROL, Histone H2B.1, ...
Authors:Luo, Q, Wang, B.
Deposit date:2020-02-28
Release date:2020-10-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:OsChz1 acts as a histone chaperone in modulating chromatin organization and genome function in rice.
Nat Commun, 11, 2020
7CRR
DownloadVisualize
BU of 7crr by Molmil
Native NSD3 bound to 187-bp nucleosome
Descriptor: DNA (168-MER), DNA(168-MER), Histone H2A, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7CRQ
DownloadVisualize
BU of 7crq by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
6USJ
DownloadVisualize
BU of 6usj by Molmil
Structure of two nucleosomes bridged by human PARP2
Descriptor: Histone H2A, Histone H2B type 1-J, Histone H3.1, ...
Authors:Gaullier, G, Bowerman, S, Luger, K.
Deposit date:2019-10-27
Release date:2020-10-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Bridging of nucleosome-proximal DNA double-strand breaks by PARP2 enhances its interaction with HPF1.
Plos One, 15, 2020
7CCR
DownloadVisualize
BU of 7ccr by Molmil
Structure of the 2:2 cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (147-MER), Histone H2A type 1-B/E, ...
Authors:Cao, D, Han, X, Fan, X, Xu, R.M, Zhang, X.
Deposit date:2020-06-17
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural basis for nucleosome-mediated inhibition of cGAS activity.
Cell Res., 30, 2020
7CCQ
DownloadVisualize
BU of 7ccq by Molmil
Structure of the 1:1 cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (147-MER), Histone H2A type 1-B/E, ...
Authors:Cao, D, Han, X, Fan, X, Xu, R.M, Zhang, X.
Deposit date:2020-06-17
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for nucleosome-mediated inhibition of cGAS activity.
Cell Res., 30, 2020
6LA8
DownloadVisualize
BU of 6la8 by Molmil
349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0
Descriptor: CALCIUM ION, DNA (349-MER), Histone H1.0, ...
Authors:Adhireksan, Z, Lee, P.L, Sharma, D, Davey, C.A.
Deposit date:2019-11-12
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
6LA9
DownloadVisualize
BU of 6la9 by Molmil
349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 (high cryoprotectant)
Descriptor: CALCIUM ION, DNA (349-MER), Histone H1.0, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2019-11-12
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
6M44
DownloadVisualize
BU of 6m44 by Molmil
355 bp di-nucleosome harboring cohesive DNA termini (high cryoprotectant)
Descriptor: CALCIUM ION, DNA (355-MER), Histone H2A type 1-B/E, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2020-03-05
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
6M3V
DownloadVisualize
BU of 6m3v by Molmil
355 bp di-nucleosome harboring cohesive DNA termini
Descriptor: CALCIUM ION, DNA (355-MER), Histone H2A type 1-B/E, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2020-03-04
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.6 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
6R2V
DownloadVisualize
BU of 6r2v by Molmil
Arabidopsis NF-Y/CCAAT-box complex
Descriptor: FT (-5kb) CCAAT-box 3', FT (-5kb) CCAAT-box 5', NF-YB2, ...
Authors:Chaves-Sanjuan, A, Gnesutta, N, Chiara, M, Bernardini, A, Fornara, F, Horner, D, Nardini, M, Mantovani, R.
Deposit date:2019-03-19
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
6R0N
DownloadVisualize
BU of 6r0n by Molmil
Histone fold domain of AtNF-YB2/NF-YC3 in I2
Descriptor: GLYCEROL, NF-YB2, NF-YC3
Authors:Chaves-Sanjuan, A, Gnesutta, N, Bernardini, A, Fornara, F, Nardini, M, Mantovani, R.
Deposit date:2019-03-13
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
6R0L
DownloadVisualize
BU of 6r0l by Molmil
Histone fold domain of OsGhd8/NF-YC7 in I2
Descriptor: GLYCEROL, OsGhd8, OsNF-YC7
Authors:Chaves-Sanjuan, A, Gobbini, A, Nardini, M.
Deposit date:2019-03-13
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
6R0M
DownloadVisualize
BU of 6r0m by Molmil
Histone fold domain of AtNF-YB2/NF-YC3 in P212121
Descriptor: NF-YB2, NF-YC3
Authors:Chaves-Sanjuan, A, Gnesutta, N, Chiara, M, Bernardini, A, Fornara, F, Horner, D, Nardini, M, Mantovani, R.
Deposit date:2019-03-13
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
6M4G
DownloadVisualize
BU of 6m4g by Molmil
Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2
Descriptor: DNA (93-MER), Histone H2A-Bbd type 2/3, Histone H2B type 2-E, ...
Authors:Zhou, M, Dai, L.C, Li, C.M, Shi, L.X, Huang, Y, Guo, Z.Q.
Deposit date:2020-03-06
Release date:2020-09-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of nucleosome dynamics modulation by histone variants H2A.B and H2A.Z.2.2.
Embo J., 40, 2021
6M4H
DownloadVisualize
BU of 6m4h by Molmil
Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2
Descriptor: DNA (103-MER), Histone H2A-Bbd type 2/3, Histone H2B type 2-E, ...
Authors:Zhou, M, Dai, L.C, Li, C.M, Shi, L.X, Huang, Y, Guo, Z.Q.
Deposit date:2020-03-07
Release date:2020-09-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of nucleosome dynamics modulation by histone variants H2A.B and H2A.Z.2.2.
Embo J., 40, 2021
6M4D
DownloadVisualize
BU of 6m4d by Molmil
Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2
Descriptor: DNA (125-MER), Histone H2A.V, Histone H2B type 2-E, ...
Authors:Zhou, M, Dai, L.C, Li, C.M, Shi, L.X, Huang, Y, Guo, Z.Q.
Deposit date:2020-03-06
Release date:2020-09-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural basis of nucleosome dynamics modulation by histone variants H2A.B and H2A.Z.2.2.
Embo J., 40, 2021
6Y5E
DownloadVisualize
BU of 6y5e by Molmil
Structure of human cGAS (K394E) bound to the nucleosome (focused refinement of cGAS-NCP subcomplex)
Descriptor: Cyclic GMP-AMP synthase, DNA (153-MER), Histone H2A type 2-C, ...
Authors:Pathare, G.R, Cavadini, S, Kempf, G, Thoma, N.H.
Deposit date:2020-02-25
Release date:2020-09-23
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural mechanism of cGAS inhibition by the nucleosome.
Nature, 587, 2020
6Y5D
DownloadVisualize
BU of 6y5d by Molmil
Structure of human cGAS (K394E) bound to the nucleosome
Descriptor: Cyclic GMP-AMP synthase, DNA (153-MER), Histone H2A type 2-A, ...
Authors:Pathare, G.R, Cavadini, S, Kempf, G, Thoma, N.H.
Deposit date:2020-02-25
Release date:2020-09-23
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural mechanism of cGAS inhibition by the nucleosome.
Nature, 587, 2020
7A08
DownloadVisualize
BU of 7a08 by Molmil
CryoEM Structure of cGAS Nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, Histone H2A type 1-C, Histone H2B type 1-C/E/F/G/I, ...
Authors:Michalski, S, de Oliveira Mann, C.C, Witte, G, Bartho, J, Lammens, K, Hopfner, K.P.
Deposit date:2020-08-07
Release date:2020-09-23
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis for sequestration and autoinhibition of cGAS by chromatin.
Nature, 587, 2020

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon