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6BKZ
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Novel Modes of Inhibition of Wild-Type IDH1: Non-equivalent Allosteric Inhibition with Cmpd3
Descriptor: (7R)-1-[(4-fluorophenyl)methyl]-N-{3-[(1R)-1-hydroxyethyl]phenyl}-7-methyl-5-(1H-pyrrole-2-carbonyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridine-3-carboxamide, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Jakob, C.G, Qiu, W.
Deposit date:2017-11-09
Release date:2018-07-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Novel Modes of Inhibition of Wild-Type Isocitrate Dehydrogenase 1 (IDH1): Direct Covalent Modification of His315.
J. Med. Chem., 61, 2018
8AR8
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BU of 8ar8 by Molmil
Bovine glutamate dehydrogenase in complex with ADP at 2.4 A resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamate dehydrogenase (NAD(P)(+))
Authors:Aleshin, V.A, Bellinzoni, M.
Deposit date:2022-08-15
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for the Binding of Allosteric Activators Leucine and ADP to Mammalian Glutamate Dehydrogenase.
Int J Mol Sci, 23, 2022
6BSW
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BU of 6bsw by Molmil
Crystal structure of Xyloglucan Xylosyltransferase 1 ternary form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, MANGANESE (II) ION, ...
Authors:Culbertson, A.T, Ehrlich, J.J, Choe, J, Honzatko, R.B, Zabotina, O.A.
Deposit date:2017-12-04
Release date:2018-05-23
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.156 Å)
Cite:Structure of xyloglucan xylosyltransferase 1 reveals simple steric rules that define biological patterns of xyloglucan polymers.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6F5X
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BU of 6f5x by Molmil
Crystal structure of the SYCP1 N-terminal head-to-head assembly in closed conformation
Descriptor: IODIDE ION, Synaptonemal complex protein 1, TRIETHYLENE GLYCOL
Authors:Ratcliff, M, Dunce, J.M, Davies, O.R.
Deposit date:2017-12-04
Release date:2018-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
6F65
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BU of 6f65 by Molmil
R2-like ligand-binding oxidase A171F mutant with aerobically reconstituted Mn/Fe cofactor
Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2017-12-05
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase.
J. Biol. Inorg. Chem., 24, 2019
6PT7
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BU of 6pt7 by Molmil
Structure of KatE1 catalase from Acinetobacter sp. Ver3
Descriptor: CHLORIDE ION, Catalase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Gonzalez, J.M, Sartorio, M.G, Cortez, N.
Deposit date:2019-07-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and functional properties of the cold-adapted catalase from Acinetobacter sp. Ver3 native to the Atacama plateau in northern Argentina
Acta Crystallogr.,Sect.D, D77, 2021
6PT9
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BU of 6pt9 by Molmil
Crystal structure of PsS1_NC C84S in complex with k-neocarrabiose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-15
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6F7A
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BU of 6f7a by Molmil
Gloeobacter Ligand-gated Ion Channel (GLIC) closed state crystallized in an ultra-swollen lipidic mesophase
Descriptor: Proton-gated ion channel
Authors:Martiel, I, Zabara, A, Chong, J.Y.T, Stark, L, Cromer, B, Dummond, C.J, Mezzenga, R.
Deposit date:2017-12-07
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (6 Å)
Cite:Design of ultra-swollen lipidic mesophases for the crystallization of membrane proteins with large extracellular domains.
Nat Commun, 9, 2018
5KMF
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BU of 5kmf by Molmil
Structure of CavAb in complex with nimodipine
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein, ...
Authors:Tang, L, Gamal EL-Din, T.M, Swanson, T.M, Pryde, D.C, Scheuer, T, Zheng, N, Catterall, W.A.
Deposit date:2016-06-26
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs.
Nature, 537, 2016
6F2L
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BU of 6f2l by Molmil
Crystal structure of the complex between PPARgamma LBD and the ligand LJ570: structure obtained from crystals of the apo-form soaked for 15 days.
Descriptor: (2S)-3-(biphenyl-4-yl)-2-(biphenyl-4-yloxy)propanoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Pochetti, G, Montanari, M.
Deposit date:2017-11-24
Release date:2018-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of the First PPAR alpha / gamma Dual Agonist Able To Bind to Canonical and Alternative Sites of PPAR gamma and To Inhibit Its Cdk5-Mediated Phosphorylation.
J.Med.Chem., 61, 2018
5KZU
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BU of 5kzu by Molmil
Crystal structure of an acetylcholine binding protein from Aplysia californica (Ac-AChBP) in complex with click chemistry compound 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole
Descriptor: 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole, SULFATE ION, Soluble acetylcholine receptor, ...
Authors:Bobango, J, Wu, J, Talley, I.T, Sankaran, B, Talley, T.T.
Deposit date:2016-07-25
Release date:2016-11-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) in complex with click chemistry compound 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole
To Be Published
6FAX
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BU of 6fax by Molmil
Complex of Human CD40 Ectodomain with Lob 7.4 Fab
Descriptor: Lob 7.4 heavy chain, Lob 7.4 light chain, Tumor necrosis factor receptor superfamily member 5
Authors:Orr, C.M, Tews, I, Pearson, A.R.
Deposit date:2017-12-18
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Complex Interplay between Epitope Specificity and Isotype Dictates the Biological Activity of Anti-human CD40 Antibodies.
Cancer Cell, 33, 2018
6PZ4
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BU of 6pz4 by Molmil
co-crystal structure of BACE with inhibitor AM-6494
Descriptor: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
Authors:Huang, X.
Deposit date:2019-07-31
Release date:2019-10-23
Last modified:2020-03-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of AM-6494: A Potent and Orally Efficacious beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitor with in Vivo Selectivity over BACE2.
J.Med.Chem., 63, 2020
6F3M
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BU of 6f3m by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa complexed with adenosine, K+ and Zn2+ cations
Descriptor: ADENOSINE, Adenosylhomocysteinase, GLYCEROL, ...
Authors:Czyrko, J, Brzezinski, K.
Deposit date:2017-11-28
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Metal-cation regulation of enzyme dynamics is a key factor influencing the activity of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa.
Sci Rep, 8, 2018
2M5Z
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BU of 2m5z by Molmil
Enterocin 7A
Descriptor: Enterocin JSA
Authors:Lohans, C.T, Towle, K.M, Miskolzie, M, McKay, R.T, van Belkum, M.J, McMullen, L.M, Vederas, J.C.
Deposit date:2013-03-16
Release date:2013-06-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structures of the Linear Leaderless Bacteriocins Enterocin 7A and 7B Resemble Carnocyclin A, a Circular Antimicrobial Peptide
Biochemistry, 52, 2013
2MJJ
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BU of 2mjj by Molmil
A tetrahelical DNA fold adopted by alternating GGG and GCG tracts
Descriptor: 5'-D(*GP*GP*GP*AP*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*G)-3'
Authors:Kocman, V, Plavec, J.
Deposit date:2014-01-10
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A tetrahelical DNA fold adopted by tandem repeats of alternating GGG and GCG tracts.
Nat Commun, 5, 2014
6YQ2
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BU of 6yq2 by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-129
Descriptor: 14-3-3 protein sigma, 4-[(2~{R},6~{S})-2,6-dimethylmorpholin-4-yl]sulfonylbenzaldehyde, p65pS45
Authors:Wolter, M, Ottmann, C.
Deposit date:2020-04-16
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
6FA5
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BU of 6fa5 by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Hamann, F, Schmitt, A, Neumann, P, Ficner, R.
Deposit date:2017-12-15
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6PSL
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BU of 6psl by Molmil
Structure of a N-Me-D-Gln4,D-aza-Thr8,Arg10-teixobactin analogue
Descriptor: CHLORIDE ION, teixobactin analogue
Authors:Nowick, J.S, Yang, H, Pishenko, A, Li, X.
Deposit date:2019-07-12
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Design, Synthesis, and Study of Lactam and Ring-Expanded Analogues of Teixobactin.
J.Org.Chem., 85, 2020
6YPY
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BU of 6ypy by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-123
Descriptor: 14-3-3 protein sigma, 4-(4-ethanoylpiperazin-1-yl)sulfonylbenzaldehyde, p65pS45
Authors:Wolter, M, Ottmann, C.
Deposit date:2020-04-16
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
5L2D
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BU of 5l2d by Molmil
Streptococcal surface adhesin - CshA NR2
Descriptor: Surface-associated protein CshA
Authors:Back, C.R, Race, P.R, Jenkinson, H.F.
Deposit date:2016-08-01
Release date:2016-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The Streptococcus gordonii Adhesin CshA Protein Binds Host Fibronectin via a Catch-Clamp Mechanism.
J. Biol. Chem., 292, 2017
6YRQ
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BU of 6yrq by Molmil
Crystal structure of the tetramerization domain of the glycoprotein Gn (Andes virus) at pH 4.6
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Serris, A, Rey, F.A, Guardado-Calvo, P.
Deposit date:2020-04-20
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism.
Cell, 183, 2020
8W0Q
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BU of 8w0q by Molmil
Pembrolizumab CDR-H3 Loop Mimic
Descriptor: Pembrolizumab CDR-H3 Loop Mimic
Authors:Feig, M, Roche, S.P.
Deposit date:2024-02-14
Release date:2024-07-03
Last modified:2024-07-31
Method:SOLUTION NMR
Cite:De Novo Synthesis and Structural Elucidation of CDR-H3 Loop Mimics.
Acs Chem.Biol., 19, 2024
5KJ7
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BU of 5kj7 by Molmil
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form) - from XFEL diffraction
Descriptor: CALCIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Lyubimov, A.Y, Uervirojnangkoorn, M, Zhou, Q, Zhao, M, Sauter, N.K, Brewster, A.S, Weis, W.I, Brunger, A.T.
Deposit date:2016-06-17
Release date:2016-10-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Advances in X-ray free electron laser (XFEL) diffraction data processing applied to the crystal structure of the synaptotagmin-1 / SNARE complex.
Elife, 5, 2016
6CUF
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BU of 6cuf by Molmil
Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody vFP1.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Acharya, P, Carragher, B, Potter, C.S, Kwong, P.D.
Deposit date:2018-03-26
Release date:2018-07-25
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Complete functional mapping of infection- and vaccine-elicited antibodies against the fusion peptide of HIV.
PLoS Pathog., 14, 2018

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PDB entries from 2024-08-28

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