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8RFZ
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BU of 8rfz by Molmil
Structure of E166A BlaC from Mycobacterium tuberculosis at pH 4.5
Descriptor: Beta-lactamase, SULFATE ION
Authors:Sun, J, Bruenle, S, Ubbink, M.
Deposit date:2023-12-13
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:A low-barrier proton shared between two aspartates acts as a conformational switch that changes the substrate specificity of the beta-lactamase BlaC.
Int.J.Biol.Macromol., 278, 2024
6OVX
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BU of 6ovx by Molmil
Crystal structure of mithramycin 3-side chain keto-reductase MtmW in complex with NAD+, P422 form
Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative side chain reductase
Authors:Hou, C, Yu, X, Rohr, J, Tsodikov, O.V.
Deposit date:2019-05-08
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a Cryptic Intermediate in Late Steps of Mithramycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 59, 2020
6WKL
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BU of 6wkl by Molmil
Fab Fragment of Anti-human LAG3 antibody (BAP050)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BAP050 Fab Heavy Chain, BAP050 Fab Light Chain
Authors:Agnihotri, P, Mishra, A.K, Mariuzza, R.A.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Fab Fragment of Anti-human LAG3 antibody
To Be Published
6OR0
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BU of 6or0 by Molmil
Crystal structure of Insulin from Non-merohedrally twinned crystals
Descriptor: Insulin chain A, Insulin chain B
Authors:Sevvana, M, Ruf, M, Uson, I, Sheldrick, G.M, Herbst-Irmer, R.
Deposit date:2019-04-29
Release date:2019-12-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Non-merohedral twinning: from minerals to proteins.
Acta Crystallogr D Struct Biol, 75, 2019
6WEO
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BU of 6weo by Molmil
IL-22 Signaling Complex with IL-22R1 and IL-10Rbeta
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Saxton, R.A, Jude, K.M, Henneberg, L.T, Garcia, K.C.
Deposit date:2020-04-02
Release date:2021-04-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The tissue protective functions of interleukin-22 can be decoupled from pro-inflammatory actions through structure-based design.
Immunity, 54, 2021
6M0E
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BU of 6m0e by Molmil
Beijerinckia indica beta-fructosyltransferase complexed with fructose
Descriptor: Levansucrase, MAGNESIUM ION, beta-D-fructofuranose, ...
Authors:Tonozuka, T.
Deposit date:2020-02-21
Release date:2020-08-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a glycoside hydrolase family 68 beta-fructosyltransferase from Beijerinckia indica subsp. indica in complex with fructose.
Biosci.Biotechnol.Biochem., 84, 2020
7QGJ
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BU of 7qgj by Molmil
Apo structure of BIR2 Domain of BIRC2
Descriptor: 1,2-ETHANEDIOL, Baculoviral IAP repeat-containing protein 2, ZINC ION
Authors:Kraemer, A, Farges, F, Schwalm, M.P, Saxena, K, Preuss, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-12-08
Release date:2022-02-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Apo structure BIR2 Domain of BIRC2
To Be Published
6O6S
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BU of 6o6s by Molmil
Crystal structure of Apo Csm6
Descriptor: Csm6
Authors:Jia, N, Patel, D.J.
Deposit date:2019-03-07
Release date:2019-07-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:CRISPR-Cas III-A Csm6 CARF Domain Is a Ring Nuclease Triggering Stepwise cA4Cleavage with ApA>p Formation Terminating RNase Activity.
Mol.Cell, 75, 2019
6ZZH
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BU of 6zzh by Molmil
Structure of soluble SmhB crystal form 2 of the tripartite alpha-pore forming toxin, Smh, from Serratia marcescens.
Descriptor: SmhB
Authors:Churchill-Angus, A.M, Baker, P.J.
Deposit date:2020-08-04
Release date:2021-03-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Characterisation of a tripartite alpha-pore forming toxin from Serratia marcescens
Sci Rep, 11, 2021
6M7A
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BU of 6m7a by Molmil
Structure of REV7-R124A complexed with SHLD3(28-73)
Descriptor: Mitotic spindle assembly checkpoint protein MAD2B, Shieldin complex subunit 3
Authors:Ma, Y.Z, Li, Y, Wu, B.X, Huang, H.D.
Deposit date:2020-03-18
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of REV7-R124A complexed with SHLD3(28-73)
To Be Published
6ZSY
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BU of 6zsy by Molmil
Crystal structure of the Grindelwald extracellular domain complex
Descriptor: Protein grindelwald
Authors:Palmerini, V, Cecatiello, V, Pasqualato, S, Mapelli, M.
Deposit date:2020-07-17
Release date:2021-03-31
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (0.926 Å)
Cite:Drosophila TNFRs Grindelwald and Wengen bind Eiger with different affinities and promote distinct cellular functions.
Nat Commun, 12, 2021
6OEW
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BU of 6oew by Molmil
Structure of a Cytidylyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Cytidylyltransferase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-03-27
Release date:2019-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a Cytidylyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
to be published
8ROI
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BU of 8roi by Molmil
Human cohesin SMC3-HD(EQ)/RAD21-N complex - ADP-bound conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Double-strand-break repair protein rad21 homolog, Structural maintenance of chromosomes protein 3
Authors:Vitoria Gomes, M, Romier, C.
Deposit date:2024-01-11
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The cohesin ATPase cycle is mediated by specific conformational dynamics and interface plasticity of SMC1A and SMC3 ATPase domains.
Cell Rep, 43, 2024
7A9W
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BU of 7a9w by Molmil
Structure of yeast Rmd9p in complex with 20nt target RNA
Descriptor: CHLORIDE ION, Protein RMD9, mitochondrial, ...
Authors:Hillen, H.S, Markov, D.A, Ireneusz, W.D, Hofmann, K.B, Cowan, A.T, Jones, J.L, Temiakov, D, Cramer, P, Anikin, M.
Deposit date:2020-09-02
Release date:2021-04-07
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The pentatricopeptide repeat protein Rmd9 recognizes the dodecameric element in the 3'-UTRs of yeast mitochondrial mRNAs.
Proc.Natl.Acad.Sci.USA, 118, 2021
6OHY
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BU of 6ohy by Molmil
Chimpanzee SIV Env trimeric ectodomain.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pallesen, J, Andrabi, R, de Val, N, Burton, D.R, Ward, A.B.
Deposit date:2019-04-08
Release date:2019-06-05
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The Chimpanzee SIV Envelope Trimer: Structure and Deployment as an HIV Vaccine Template.
Cell Rep, 27, 2019
6ZMD
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BU of 6zmd by Molmil
Crystal structure of HYPE covalently tethered to BiP bound to AMP-PNP
Descriptor: Endoplasmic reticulum chaperone BiP, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Fauser, J, Gulen, B, Pett, C, Hedberg, C, Itzen, A, Pogenberg, V.
Deposit date:2020-07-02
Release date:2021-04-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Specificity of AMPylation of the human chaperone BiP is mediated by TPR motifs of FICD.
Nat Commun, 12, 2021
6OIP
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BU of 6oip by Molmil
Crystal structure of MYST acetyltransferase domain in complex with inhibitor 34
Descriptor: 2-fluoro-3-methyl-N'-[(naphthalen-2-yl)sulfonyl]benzohydrazide, GLYCEROL, Histone acetyltransferase KAT8, ...
Authors:Hermans, S.J, Chung, M.C, Parker, M.W, Thomas, T, Baell, J.B.
Deposit date:2019-04-09
Release date:2019-07-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of Benzoylsulfonohydrazides as Potent Inhibitors of the Histone Acetyltransferase KAT6A.
J.Med.Chem., 62, 2019
7A9X
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BU of 7a9x by Molmil
Structure of yeast Rmd9p in complex with 16nt target RNA
Descriptor: CHLORIDE ION, Protein RMD9, mitochondrial, ...
Authors:Hillen, H.S, Markov, D.A, Ireneusz, W.D, Hofmann, K.B, Cowan, A.T, Jones, J.L, Temiakov, D, Cramer, P, Anikin, M.
Deposit date:2020-09-02
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The pentatricopeptide repeat protein Rmd9 recognizes the dodecameric element in the 3'-UTRs of yeast mitochondrial mRNAs.
Proc.Natl.Acad.Sci.USA, 118, 2021
7A10
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BU of 7a10 by Molmil
LppS with covalent adduct derived from 1g
Descriptor: 4-methoxycyclohexa-2,5-diene-1-thione, L,D-transpeptidase 2
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-11
Release date:2021-04-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
6OJM
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BU of 6ojm by Molmil
Crystal structure of 1,4-dihydroxy-2-naphthoyl-CoA synthase Elizabethkingia anophelis NUHP1
Descriptor: 1,4-dihydroxy-2-naphthoyl-CoA synthase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-04-11
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of 1,4-dihydroxy-2-naphthoyl-CoA synthase Elizabethkingia anophelis NUHP1
TO BE PUBLISHED
6ZM2
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BU of 6zm2 by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with ADP-BeF3 and ssRNA
Descriptor: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Hamann, F, Ficner, R.
Deposit date:2020-07-01
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of Prp2 bound to RNA and ADP-BeF 3 - reveals structural features important for RNA unwinding by DEAH-box ATPases.
Acta Crystallogr D Struct Biol, 77, 2021
8EZD
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BU of 8ezd by Molmil
Brain-derived 42-residue amyloid-beta fibril type A
Descriptor: Beta-amyloid protein 42
Authors:Tycko, R, Lee, M, Yau, Y.-M, Louis, J.M.
Deposit date:2022-10-31
Release date:2023-03-22
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structures of brain-derived 42-residue amyloid-beta fibril polymorphs with unusual molecular conformations and intermolecular interactions.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EZE
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BU of 8eze by Molmil
Brain-derived 42-residue amyloid-beta fibril type B
Descriptor: Beta-amyloid protein 42
Authors:Tycko, R, Lee, M, Yau, Y.-M, Louis, J.M.
Deposit date:2022-10-31
Release date:2023-03-22
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structures of brain-derived 42-residue amyloid-beta fibril polymorphs with unusual molecular conformations and intermolecular interactions.
Proc.Natl.Acad.Sci.USA, 120, 2023
7A0Z
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BU of 7a0z by Molmil
LppS with covalent adduct derived from 1b
Descriptor: L,D-transpeptidase 2, TRIS(HYDROXYETHYL)AMINOMETHANE, benzenethiol
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-11
Release date:2021-04-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
8S4H
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BU of 8s4h by Molmil
Crystal structure of scFv-1B6 in complex with rocuronium bromide
Descriptor: ScFv-1B6 VL, rocuronium, scFv-1B6 VH
Authors:Saul, F.A, Haouz, A, Bruhns, P.
Deposit date:2024-02-21
Release date:2024-09-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Rocuronium-specific antibodies drive perioperative anaphylaxis but can also function as reversal agents in preclinical models.
Sci Transl Med, 16, 2024

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PDB entries from 2024-11-06

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