PDB: 26577 resultsInfo pagesStatus searchChemie searchBIRD

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3EMW	Crystal Structure of human splA/ryanodine receptor domain and SOCS box containing 2 (SPSB2) in complex with a 20-residue VASA peptide Descriptor: 1,2-ETHANEDIOL, Peptide (VASA), SPRY domain-containing SOCS box protein 2 Authors: Filippakopoulos, P, Sharpe, T, Keates, T, Murray, J.W, Savitsky, P, Roos, A.K, Pike, A.C.W, Von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Bullock, A, Structural Genomics Consortium (SGC) Deposit date: 2008-09-25 Release date: 2008-10-28 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural basis for Par-4 recognition by the SPRY domain- and SOCS box-containing proteins SPSB1, SPSB2, and SPSB4. J.Mol.Biol., 401, 2010
5KQQ	Crystal structure of the W153F variant of catalase-peroxidase from B. pseudomallei treated Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Catalase-peroxidase, OXYGEN MOLECULE, ... Authors: Loewen, P.C. Deposit date: 2016-07-06 Release date: 2017-07-12 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Structure of the W153F variant of catalase-peroxidase of B. pseudomallei at 1.87 Angstroms. To be published
5ALA	Structure of Leishmania major peroxidase D211R mutant (low res) Descriptor: ASCORBATE PEROXIDASE, CALCIUM ION, POTASSIUM ION, ... Authors: Chreifi, G, Hollingsworth, S.A, Li, H, Tripathi, S, Arce, A.P, Magana-Garcia, H.I, Poulos, T.L. Deposit date: 2015-03-07 Release date: 2015-05-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.73 Å) Cite: Enzymatic Mechanism of Leishmania major Peroxidase and the Critical Role of Specific Ionic Interactions. Biochemistry, 54, 2015
6A4I	Crystal Structure of human TDO inhibitor complex Descriptor: 1-(6-chloro-1H-indazol-4-yl)cyclohexan-1-ol, CITRIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Fu, G, Wang, J, Luo, G, Wu, G, Qian, K. Deposit date: 2018-06-20 Release date: 2018-07-18 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Crystal Structure of human TDO inhibitor complex To Be Published
3K91	Polysulfane Bridge in Cu-Zn Superoxide Dismutase Descriptor: PENTASULFIDE-SULFUR, Superoxide dismutase [Cu-Zn] Authors: You, Z, Cao, X, Taylor, A.B, Hart, P.J, Levine, R.L. Deposit date: 2009-10-15 Release date: 2010-01-19 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Characterization of a covalent polysulfane bridge in copper-zinc superoxide dismutase . Biochemistry, 49, 2010
3CQQ	Human SOD1 G85R Variant, Structure II Descriptor: ACETYL GROUP, Superoxide dismutase [Cu-Zn], ZINC ION Authors: Cao, X, Antonyuk, S, Whitson, L.J, Taylor, A.B, Holloway, S.P, Strange, R.W, Doucette, P.A, Valentine, J.S, Tiwari, A, Hayward, L.J, Padua, S, Cohlberg, J.A, Hasnain, S.S, Hart, P.J. Deposit date: 2008-04-03 Release date: 2008-04-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structures of the G85R Variant of SOD1 in Familial Amyotrophic Lateral Sclerosis. J.Biol.Chem., 283, 2008
3CQP	Human SOD1 G85R Variant, Structure I Descriptor: COPPER (II) ION, MALONATE ION, Superoxide dismutase [Cu-Zn], ... Authors: Cao, X, Antonyuk, S, Seetharaman, S.V, Whitson, L.J, Taylor, A.B, Holloway, S.P, Strange, R.W, Doucette, P.A, Valentine, J.S, Tiwari, A, Hayward, L.J, Padua, S, Cohlberg, J.A, Hasnain, S.S, Hart, P.J. Deposit date: 2008-04-03 Release date: 2008-04-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structures of the G85R Variant of SOD1 in Familial Amyotrophic Lateral Sclerosis. J.Biol.Chem., 283, 2008
6SPA	A4V MUTANT OF HUMAN SUPEROXIDE DISMUTASE 1 IN C2 SPACE GROUP Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, SULFATE ION, ... Authors: Shahid, M, Chantadul, V, Amporndanai, K, Wright, G, Antonyuk, S, Hasnain, S. Deposit date: 2019-08-31 Release date: 2020-03-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol, 3, 2020
6B79	Curved pair of sheets formed from SOD1 residues 28-38 with familial mutation G37R. Descriptor: 7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid, Superoxide dismutase [Cu-Zn] Authors: Sangwan, S, Sawaya, M.R, Eisenberg, D.S. Deposit date: 2017-10-03 Release date: 2018-05-30 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Atomic structures of corkscrew-forming segments of SOD1 reveal varied oligomer conformations. Protein Sci., 27, 2018
6SPK	A4V MUTANT OF HUMAN SOD1 WITH EBSELEN DERIVATIVE 6 Descriptor: 2-selanyl-~{N}-[3-[4-(trifluoromethyl)phenyl]phenyl]benzamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ... Authors: Chantadul, V, Amporndanai, K, Wright, G, Shahid, M, Antonyuk, S, Hasnain, S. Deposit date: 2019-09-01 Release date: 2020-03-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.77 Å) Cite: Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol, 3, 2020
5AL9	Structure of Leishmania major peroxidase D211R mutant (high res) Descriptor: ASCORBATE PEROXIDASE, CALCIUM ION, POTASSIUM ION, ... Authors: Chreifi, G, Hollingsworth, S.A, Li, H, Tripathi, S, Arce, A.P, Magana-Garcia, H.I, Poulos, T.L. Deposit date: 2015-03-07 Release date: 2015-05-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.37 Å) Cite: Enzymatic Mechanism of Leishmania major Peroxidase and the Critical Role of Specific Ionic Interactions. Biochemistry, 54, 2015
6SPJ	A4V MUTANT OF HUMAN SOD1 WITH EBSELEN DERIVATIVE 1 Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, GLYCEROL, ... Authors: Chantadul, V, Amporndanai, K, Wright, G, Antonyuk, S, Hasnain, S. Deposit date: 2019-09-01 Release date: 2020-03-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol, 3, 2020
3ECW	Crystal structure of the ALS-related pathological mutant T54R of human apo Cu,Zn Superoxide Dismutase (SOD1) Descriptor: Superoxide dismutase [Cu-Zn] Authors: Calderone, V. Deposit date: 2008-09-02 Release date: 2009-05-19 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural and dynamic aspects related to oligomerization of apo SOD1 and its mutants. Proc.Natl.Acad.Sci.USA, 106, 2009
7ZOL	Cryo-EM structure of a CRISPR effector in complex with regulator Descriptor: Cas7-11, TPR-CHAT, ZINC ION, ... Authors: Babatunde, E.E, Davide, T, Bertrand, B, Sergey, N, Alexander, M, Henning, S, Dong, C.N. Deposit date: 2022-04-26 Release date: 2022-11-30 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.03 Å) Cite: Structural insights into the regulation of Cas7-11 by TPR-CHAT. Nat.Struct.Mol.Biol., 30, 2023
7ZOQ	Cryo-EM structure of a CRISPR effector in complex with a caspase regulator Descriptor: RNA (39-MER), TPR-CHAT, ZINC ION, ... Authors: Babatunde, E.E, Davide, T, Bertrand, B, Sergey, N, Alexander, M, Henning, S, Dong, C.N. Deposit date: 2022-04-26 Release date: 2022-11-30 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural insights into the regulation of Cas7-11 by TPR-CHAT. Nat.Struct.Mol.Biol., 30, 2023
6SPI	A4V MUTANT OF HUMAN SOD1 WITH EBSELEN DERIVATIVE 4 Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... Authors: Chantadul, V, Amporndanai, K, Wright, G, Antonyuk, S, Hasnain, S. Deposit date: 2019-09-01 Release date: 2020-03-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol, 3, 2020
7ZPQ	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1) Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R. Deposit date: 2022-04-28 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.47 Å) Cite: Structural basis for clearing of ribosome collisions by the RQT complex. Nat Commun, 14, 2023
7ZRS	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R. Deposit date: 2022-05-05 Release date: 2023-02-22 Last modified: 2023-03-01 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Structural basis for clearing of ribosome collisions by the RQT complex. Nat Commun, 14, 2023
7ZUX	Collided ribosome in a disome unit from S. cerevisiae Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R. Deposit date: 2022-05-13 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Structural basis for clearing of ribosome collisions by the RQT complex. Nat Commun, 14, 2023
7ZUW	Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R. Deposit date: 2022-05-13 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Structural basis for clearing of ribosome collisions by the RQT complex. Nat Commun, 14, 2023
7ZNK	Structure of an endogenous human TREX complex bound to mRNA Descriptor: RNA, Spliceosome RNA helicase DDX39B, THO complex subunit 1, ... Authors: Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C. Deposit date: 2022-04-21 Release date: 2023-05-03 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: mRNA recognition and packaging by the human transcription-export complex. Nature, 616, 2023
7ZNL	Structure of the human TREX core THO-UAP56 complex Descriptor: Spliceosome RNA helicase DDX39B, THO complex subunit 1, THO complex subunit 2, ... Authors: Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C. Deposit date: 2022-04-21 Release date: 2023-05-17 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.45 Å) Cite: mRNA recognition and packaging by the human transcription-export complex. Nature, 616, 2023
7ZQT	Helicobacter pylori adhesin BabA bound to neutralising human antibody. Descriptor: 1,2-ETHANEDIOL, Adhesin binding fucosylated histo-blood group antigen, GLYCEROL, ... Authors: Moonens, K, Boren, T. Deposit date: 2022-05-03 Release date: 2023-05-17 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Helicobacter pylori adhesin BabA bound to neutralising human antibody. To Be Published
6SPH	A4V MUTANT OF HUMAN SUPEROXIDE DISMUTASE 1 WITH EBSELEN BOND IN C2 SPACE GROUP Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, N-phenyl-2-selanylbenzamide, ... Authors: Shahid, M, Chantadul, V, Amporndanai, K, Wright, G, Antonyuk, S, Hasnain, S. Deposit date: 2019-09-01 Release date: 2020-03-18 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol, 3, 2020
3T5W	2ME modified human SOD1 Descriptor: COPPER (I) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ... Authors: Ihara, K, Yamaguchi, Y, Torigoe, H, Wakatsuki, S, Taniguchi, N, Suzuki, K, Fujiwara, N. Deposit date: 2011-07-28 Release date: 2012-08-01 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural switching of Cu,Zn-superoxide dismutases at loop VI: insights from the crystal structure of 2-mercaptoethanol-modified enzyme Biosci.Rep., 32, 2012

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