Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1OB5
DownloadVisualize
BU of 1ob5 by Molmil
T. aquaticus elongation factor EF-Tu complexed with the antibiotic enacyloxin IIa, a GTP analog, and Phe-tRNA
Descriptor: ELONGATION FACTOR TU, ENACYLOXIN IIA, MAGNESIUM ION, ...
Authors:Dahlberg, C, Nielsen, R.C, Parmeggiani, A, Nyborg, J, Nissen, P.
Deposit date:2003-01-24
Release date:2005-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Enacyloxin Iia Pinpoints a Binding Pocket of Elongation Factor TU for Development of Novel Antibiotics.
J.Biol.Chem., 281, 2006
2XIV
DownloadVisualize
BU of 2xiv by Molmil
Structure of Rv1477, hypothetical invasion protein of Mycobacterium tuberculosis
Descriptor: GLYCEROL, HYPOTHETICAL INVASION PROTEIN
Authors:Pogenberg, V, Tizzano, B, Wilmanns, M.
Deposit date:2010-07-01
Release date:2010-07-14
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Rv1477, Hypothetical Invasion Protein of Mycobacterium Tuberculosis
To be Published
2VYQ
DownloadVisualize
BU of 2vyq by Molmil
FERREDOXIN:NADP REDUCTASE MUTANT WITH THR 155 REPLACED BY GLY, ALA 160 REPLACED BY THR, LEU 263 REPLACED BY PRO AND TYR 303 REPLACED BY SER (T155G-A160T-L263P-Y303S)
Descriptor: FERREDOXIN-NADP REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Herguedas, B, Martinez-Julvez, M, Hermoso, J.A, Peregrina, J.R, Medina, M.
Deposit date:2008-07-28
Release date:2009-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein Motifs Involved in Coenzyme Interaction and Enzymatic Efficiency in Anabaena Ferredoxin-Nadp+ Reductase.
Biochemistry, 48, 2009
5TP1
DownloadVisualize
BU of 5tp1 by Molmil
The structure of the C-terminus of virulence protein IncE from Chlamydia trachomatis bound to Mus musculus SNX5-PX domain
Descriptor: Inclusion membrane protein E, Sorting nexin-5
Authors:Rosenberg, O, Czudnochowski, N.
Deposit date:2016-10-19
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Chlamydia interfere with an interaction between the mannose-6-phosphate receptor and sorting nexins to counteract host restriction.
Elife, 6, 2017
7A5Q
DownloadVisualize
BU of 7a5q by Molmil
Crystal structure of VcSiaP bound to sialic acid
Descriptor: DctP family TRAP transporter solute-binding subunit, GLYCEROL, N-acetyl-beta-neuraminic acid, ...
Authors:Schneberger, N, Peter, M.F, Hagelueken, G.
Deposit date:2020-08-21
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Triggering Closure of a Sialic Acid TRAP Transporter Substrate Binding Protein through Binding of Natural or Artificial Substrates.
J.Mol.Biol., 433, 2020
1ZTP
DownloadVisualize
BU of 1ztp by Molmil
X-ray structure of gene product from homo sapiens Hs.433573
Descriptor: Basophilic leukemia expressed protein BLES03
Authors:Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-05-27
Release date:2005-06-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure at 2.5 A resolution of human basophilic leukemia-expressed protein BLES03.
Acta Crystallogr.,Sect.F, 61, 2005
2X3U
DownloadVisualize
BU of 2x3u by Molmil
Ferredoxin-NADP reductase mutant with Tyr 303 replaced by Phe (Y303F)
Descriptor: FERREDOXIN-NADP REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Herguedas, B, Martinez-Julvez, M, Hermoso, J.A, Peregrina, J.R, Sanchez-Azqueta, A, Medina, M.
Deposit date:2010-01-27
Release date:2010-05-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Role of Specific Residues in Coenzyme Binding, Charge-Transfer Complex Formation, and Catalysis in Anabaena Ferredoxin Nadp(+)-Reductase.
Biochim.Biophys.Acta, 1797, 2010
3HVO
DownloadVisualize
BU of 3hvo by Molmil
Structure of the genotype 2B HCV polymerase bound to a NNI
Descriptor: 2-(3-bromophenyl)-6-[(2-hydroxyethyl)amino]-1h-benzo[de]isoquinoline-1,3(2h)-dione, Genome polyprotein
Authors:Rydberg, E.H, Carfi, A.
Deposit date:2009-06-16
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and Biological Evaluation of a Series of 1H-Benzo[de]isoquinoline-1,3(2H)-diones as Hepatitis C Virus NS5B Polymerase Inhibitors
To be Published
2XZ7
DownloadVisualize
BU of 2xz7 by Molmil
CRYSTAL STRUCTURE OF THE PHOSPHOENOLPYRUVATE-BINDING DOMAIN OF ENZYME I IN COMPLEX WITH PHOSPHOENOLPYRUVATE FROM THE THERMOANAEROBACTER TENGCONGENSIS PEP-SUGAR PHOSPHOTRANSFERASE SYSTEM (PTS)
Descriptor: MAGNESIUM ION, PHOSPHOENOLPYRUVATE, PHOSPHOENOLPYRUVATE-PROTEIN KINASE (PTS SYSTEM EI COMPONENT IN BACTERIA)
Authors:Waltersperger, S.M, Oberholzer, A.E, Schneider, P, Baumann, U, Erni, B.
Deposit date:2010-11-23
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Phosphoenolpyruvate: Sugar Phosphotransferase System from the Hyperthermophilic Thermoanaerobacter Tengcongensis.
Biochemistry, 50, 2011
3KF2
DownloadVisualize
BU of 3kf2 by Molmil
The HCV NS3/NS4A protease apo structure
Descriptor: 19-mer peptide from Genome polyprotein, Polyprotein, ZINC ION
Authors:Lindberg, J.D, Nystrom, S, Cummings, M.D.
Deposit date:2009-10-27
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Induced-Fit Binding of the Macrocyclic Noncovalent Inhibitor TMC435 to its HCV NS3/NS4A Protease Target
Angew.Chem.Int.Ed.Engl., 49, 2010
3KZ8
DownloadVisualize
BU of 3kz8 by Molmil
Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs (p53-DNA complex 3)
Descriptor: Cellular tumor antigen p53, DNA (5'-D(*TP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*C)-3'), IODIDE ION, ...
Authors:Rozenberg, H, Suad, O, Shakked, Z.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
Nat.Struct.Mol.Biol., 17, 2010
1Z90
DownloadVisualize
BU of 1z90 by Molmil
X-ray structure of gene product from arabidopsis thaliana at3g03250, a putative UDP-glucose pyrophosphorylase
Descriptor: AT3g03250 protein
Authors:Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-03-31
Release date:2005-04-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure and Dynamics of UDP-Glucose Pyrophosphorylase from Arabidopsis thaliana with Bound UDP-Glucose and UTP.
J.Mol.Biol., 366, 2007
2A33
DownloadVisualize
BU of 2a33 by Molmil
X-Ray Structure of a Lysine Decarboxylase-Like Protein from Arabidopsis Thaliana Gene AT2G37210
Descriptor: MAGNESIUM ION, SULFATE ION, hypothetical protein
Authors:Wesenberg, G.E, Phillips Jr, G.N, Mccoy, J.G, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-06-23
Release date:2005-07-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210.
Proteins, 65, 2006
1Y0Z
DownloadVisualize
BU of 1y0z by Molmil
X-ray structure of gene product from Arabidopsis thaliana At3g21360
Descriptor: FE (II) ION, SULFATE ION, protein product of AT3G21360
Authors:Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-11-16
Release date:2004-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure at 2.4 A resolution of the protein from gene locus At3g21360, a putative Fe(II)/2-oxoglutarate-dependent enzyme from Arabidopsis thaliana.
Acta Crystallogr.,Sect.F, 61, 2005
2QZ2
DownloadVisualize
BU of 2qz2 by Molmil
Crystal structure of a glycoside hydrolase family 11 xylanase from Aspergillus niger in complex with xylopentaose
Descriptor: Endo-1,4-beta-xylanase I, SODIUM ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Vandermarliere, E, Rombouts, S, Strelkov, S.V, Delcour, J.A, Courtin, C.M, Rabijns, A.
Deposit date:2007-08-16
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases.
Biochem.J., 410, 2008
2HH9
DownloadVisualize
BU of 2hh9 by Molmil
Thiamin pyrophosphokinase from Candida albicans
Descriptor: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, MAGNESIUM ION, Thiamin pyrophosphokinase
Authors:Abergel, C, Santini, S, Monchois, V, Rousselle, T, Claverie, J.M, Bacterial targets at IGS-CNRS, France (BIGS)
Deposit date:2006-06-28
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase.
Bmc Struct.Biol., 8, 2008
2Q99
DownloadVisualize
BU of 2q99 by Molmil
Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cerevisiae
Descriptor: Saccharopine dehydrogenase [NAD+, L-lysine-forming
Authors:Berghuis, A.M, Burk, D.L.
Deposit date:2007-06-12
Release date:2007-11-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural Studies of the Final Enzyme in the alpha-Aminoadipate Pathway-Saccharopine Dehydrogenase from Saccharomyces cerevisiae
J.Mol.Biol., 373, 2007
8SUG
DownloadVisualize
BU of 8sug by Molmil
Cryo-EM structure of the wild type P. aeruginosa flagellar filament
Descriptor: B-type flagellin
Authors:Kreutzberger, M.A, Nedeljkovic, M, Egelman, E.H, Sundberg, E.J.
Deposit date:2023-05-12
Release date:2023-06-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:An unbroken network of interactions connecting flagellin domains is required for motility in viscous environments.
Plos Pathog., 19, 2023
7SP3
DownloadVisualize
BU of 7sp3 by Molmil
E. coli RppH bound to Ap4A
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, CHLORIDE ION, FLUORIDE ION, ...
Authors:Serganov, A.A, Vasilyev, N, Nuthanakanti, A.
Deposit date:2021-11-02
Release date:2022-03-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A distinct RNA recognition mechanism governs Np 4 decapping by RppH.
Proc.Natl.Acad.Sci.USA, 119, 2022
6ZVQ
DownloadVisualize
BU of 6zvq by Molmil
Complex between SMAD2 MH2 domain and peptide from Ski corepressor
Descriptor: D(-)-TARTARIC ACID, GLYCEROL, Mothers against decapentaplegic homolog 2, ...
Authors:Purkiss, A.G, Kjaer, S, George, R, Hill, C.S.
Deposit date:2020-07-27
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Mutations in SKI in Shprintzen-Goldberg syndrome lead to attenuated TGF-beta responses through SKI stabilization.
Elife, 10, 2021
6V90
DownloadVisualize
BU of 6v90 by Molmil
Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 12
Descriptor: (2R)-2-{[2-(4-cyanophenyl)ethyl]amino}-N-[5-(1-methyl-1H-pyrazol-4-yl)pyridin-2-yl]-2-phenylacetamide, CHLORIDE ION, Histone acetyltransferase p300, ...
Authors:Gardberg, A.S.
Deposit date:2019-12-12
Release date:2020-04-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Early Drug-Discovery Efforts towards the Identification of EP300/CBP Histone Acetyltransferase (HAT) Inhibitors.
Chemmedchem, 15, 2020
6V8K
DownloadVisualize
BU of 6v8k by Molmil
Crystal structure of the p300 acetyltransferase domain with peptide-competitive inhibitor 2
Descriptor: 1-(2-methyl-1H-indol-3-yl)-2-[(2R)-2-methylpiperidin-1-yl]ethan-1-one, COENZYME A, DIMETHYL SULFOXIDE, ...
Authors:Gardberg, A.S.
Deposit date:2019-12-11
Release date:2020-04-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Early Drug-Discovery Efforts towards the Identification of EP300/CBP Histone Acetyltransferase (HAT) Inhibitors.
Chemmedchem, 15, 2020
6V8N
DownloadVisualize
BU of 6v8n by Molmil
Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 17
Descriptor: (2R)-2-{[(2S)-2-(4-cyanophenyl)propyl]amino}-N-[5-(1-methyl-1H-pyrazol-4-yl)pyridin-2-yl]-2-phenylacetamide, CHLORIDE ION, Histone acetyltransferase p300, ...
Authors:Gardberg, A.S, Wilson, J.E.
Deposit date:2019-12-11
Release date:2020-04-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Early Drug-Discovery Efforts towards the Identification of EP300/CBP Histone Acetyltransferase (HAT) Inhibitors.
Chemmedchem, 15, 2020
7BE4
DownloadVisualize
BU of 7be4 by Molmil
Crystal structure of MAP kinase p38 alpha in complex with inhibitor SR159
Descriptor: 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide, Mitogen-activated protein kinase 14
Authors:Joerger, A.C, Schroeder, M, Roehm, S, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-12-22
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe.
J.Med.Chem., 64, 2021
7BE5
DownloadVisualize
BU of 7be5 by Molmil
Crystal structure of MAP kinase p38 alpha in complex with inhibitor SR276
Descriptor: 1,2-ETHANEDIOL, 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-methyl-pyrazole-4-carboxamide, Mitogen-activated protein kinase 14
Authors:Joerger, A.C, Schroeder, M, Roehm, S, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-12-22
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8000524 Å)
Cite:Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe.
J.Med.Chem., 64, 2021

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon