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9CTV
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BU of 9ctv by Molmil
Native human GABAA receptor of beta2-alpha1-gamma2-beta1-alpha2 assembly
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhou, J, Hibbs, R.E, Noviello, C.M.
Deposit date:2024-07-25
Release date:2025-01-22
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Resolving native GABA A receptor structures from the human brain.
Nature, 638, 2025
6CU0
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BU of 6cu0 by Molmil
Crystal structure of 4-1BBL/4-1BB (C121S) complex in P21 space group
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9
Authors:Aruna, B, Zajonc, D.M, Doukov, T.
Deposit date:2018-03-23
Release date:2018-05-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of the human 4-1BB receptor bound to its ligand 4-1BBL reveal covalent receptor dimerization as a potential signaling amplifier.
J. Biol. Chem., 293, 2018
6D23
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BU of 6d23 by Molmil
GLUCOSE-6-P DEHYDROGENASE (APO FORM) FROM TRYPANOSOMA CRUZI
Descriptor: CHLORIDE ION, GLYCEROL, Glucose-6-phosphate 1-dehydrogenase, ...
Authors:Botti, H, Ortiz, C, Comini, M.A, Larrieux, N, Buschiazzo, A.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Glucose-6-Phosphate Dehydrogenase from the Human Pathogen Trypanosoma cruzi Evolved Unique Structural Features to Support Efficient Product Formation.
J.Mol.Biol., 431, 2019
7APN
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BU of 7apn by Molmil
Structure of Lipase TL from bulk agarose grown crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
7APP
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BU of 7app by Molmil
Structure of Lipase TL from capillary grown crystal in the presence of agarose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
6VF5
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BU of 6vf5 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (120 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2025-09-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair.
Nat Commun, 12, 2021
8VJW
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BU of 8vjw by Molmil
Structure of Human Neurolysin in complex with angiotensin I peptide
Descriptor: Angiotensin-1 peptide C-terminal end, Angiotensin-1 peptide N-terminal end, Neurolysin, ...
Authors:Shi, K, Aihara, H.
Deposit date:2024-01-08
Release date:2024-08-21
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:Structural basis of divergent substrate recognition and inhibition of human neurolysin.
Sci Rep, 14, 2024
7M2K
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BU of 7m2k by Molmil
CDC34A-Ubiquitin-2ab inhibitor complex
Descriptor: 4-[(3',5'-dichloro[1,1'-biphenyl]-4-yl)methyl]-N-ethyl-1-(methoxyacetyl)piperidine-4-carboxamide, Ubiquitin, Ubiquitin-conjugating enzyme E2 R1
Authors:Ceccarelli, D.F, St-Cyr, D, Tyers, M, Sicheri, F.
Deposit date:2021-03-16
Release date:2021-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Identification and optimization of molecular glue compounds that inhibit a noncovalent E2 enzyme-ubiquitin complex.
Sci Adv, 7, 2021
8VLM
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BU of 8vlm by Molmil
Crystal structure of the yeast cytosine deaminase (yCD) E64V-M100W heterodimer
Descriptor: 1,2-ETHANEDIOL, Cytosine deaminase, ZINC ION
Authors:Picard, M.-E, Grenier, G, Despres, P.C, Dube, A.K, Landry, C.R, Shi, R.
Deposit date:2024-01-11
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Compensatory mutations potentiate constructive neutral evolution by gene duplication.
Science, 385, 2024
6VF9
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BU of 6vf9 by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Ternary Complex, 50 mM Mg2+ (2160 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2025-09-03
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair.
Nat Commun, 12, 2021
8VIG
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BU of 8vig by Molmil
EgtB-IV from Geminocystis sp. isolate SKYG4, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with hercynine
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, N,N,N-trimethyl-histidine, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 32, 2024
6VF7
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BU of 6vf7 by Molmil
DNA Polymerase Mu, 8-oxodGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2025-09-03
Method:X-RAY DIFFRACTION (1.871 Å)
Cite:Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair.
Nat Commun, 12, 2021
5V2T
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BU of 5v2t by Molmil
Ethylene forming enzyme in complex with manganese and tartrate
Descriptor: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, L(+)-TARTARIC ACID, MANGANESE (II) ION
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2017-03-06
Release date:2017-08-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.227 Å)
Cite:Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
8VL3
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BU of 8vl3 by Molmil
Solution NMR structure of de novo designed protein F3 parent
Descriptor: De novo designed protein F3 parent
Authors:McShan, A.C, Simma, M.K.
Deposit date:2024-01-11
Release date:2024-08-07
Last modified:2025-08-20
Method:SOLUTION NMR
Cite:Multistate and functional protein design using RoseTTAFold sequence space diffusion.
Nat.Biotechnol., 43, 2025
8VPX
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BU of 8vpx by Molmil
UIC-10-BPE extension of UIC-1
Descriptor: UIC-10-BPE
Authors:Ganatra, P.
Deposit date:2024-01-17
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
5V37
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BU of 5v37 by Molmil
Crystal structure of SMYD3 with SAM and EPZ028862
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Boriack-Sjodin, P.A.
Deposit date:2017-03-06
Release date:2018-03-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Small molecule inhibitors and CRISPR/Cas9 mutagenesis demonstrate that SMYD2 and SMYD3 activity are dispensable for autonomous cancer cell proliferation.
Plos One, 13, 2018
8VJX
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BU of 8vjx by Molmil
Structure of Human Neurolysin in complex with bradykinin peptide
Descriptor: Bradykinin, Neurolysin, mitochondrial, ...
Authors:Shi, K, Aihara, H.
Deposit date:2024-01-08
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis of divergent substrate recognition and inhibition of human neurolysin.
Sci Rep, 14, 2024
5V31
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BU of 5v31 by Molmil
Ethylene forming enzyme in complex with manganese and L-arginine
Descriptor: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININE, MANGANESE (II) ION
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2017-03-06
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
6VFA
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BU of 6vfa by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2025-09-03
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair.
Nat Commun, 12, 2021
6VFB
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BU of 6vfb by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (960 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2025-09-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair.
Nat Commun, 12, 2021
5IEK
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BU of 5iek by Molmil
Structure of HLA-B*40:02 in complex with the endogenous peptide REFSKEPEL
Descriptor: ARG-GLU-PHE-SER-LYS-GLU-PRO-GLU-LEU, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Alpizar, A, Marcilla, M, Santiago, C.
Deposit date:2016-02-25
Release date:2016-12-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of HLA-B*40:02 in complex with the endogenous peptide REFSKEPEL
To Be Published
8VPR
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BU of 8vpr by Molmil
Crystal structure of mouse Importin alpha in complex with Dengue 1 NS5 central NLS peptide
Descriptor: Importin subunit alpha-1, RNA-directed RNA polymerase NS5 central NLS peptide
Authors:Cheng, C.X, Swarbrick, C.M.D, Forwood, J.K.
Deposit date:2024-01-16
Release date:2024-08-21
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Serotype-Specific Regulation of Dengue Virus NS5 Protein Subcellular Localization.
Acs Infect Dis., 10, 2024
8VT0
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BU of 8vt0 by Molmil
SPOT-RASTR - a cryo-EM specimen preparation technique that overcomes problems with preferred orientation and the air/water interface
Descriptor: Beta-galactosidase, MAGNESIUM ION
Authors:Esfahani, B.G, Randolph, P, Peng, R, Grant, T, Stroupe, M.E, Stagg, S.M.
Deposit date:2024-01-25
Release date:2024-08-21
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:SPOT-RASTR-A cryo-EM specimen preparation technique that overcomes problems with preferred orientation and the air/water interface.
Pnas Nexus, 3, 2024
6VFC
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BU of 6vfc by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (2160 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2025-09-03
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair.
Nat Commun, 12, 2021
5V3U
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BU of 5v3u by Molmil
Crystal Structure of the Group II Truncated Hemoglobin from Bacillus Anthracis: Trp90Leu mutant
Descriptor: CYANIDE ION, Globin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Varnado, C.L, SoRelle, E, Soman, J, Olson, J.S.
Deposit date:2017-03-08
Release date:2017-04-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Group II Truncated Hemoglobin from Bacillus Anthracis
To Be Published

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PDB entries from 2025-10-22

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