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9BKV
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BU of 9bkv by Molmil
DosP R97A bent form
Descriptor: Oxygen sensor protein DosP, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kumar, P, Kober, D.L.
Deposit date:2024-04-29
Release date:2024-11-20
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Structures of the multi-domain oxygen sensor DosP: remote control of a c-di-GMP phosphodiesterase by a regulatory PAS domain.
Nat Commun, 15, 2024
9BGV
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BU of 9bgv by Molmil
DosP R97A straight form
Descriptor: Oxygen sensor protein DosP, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kumar, P, Kober, D.L.
Deposit date:2024-04-19
Release date:2024-11-20
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Structures of the multi-domain oxygen sensor DosP: remote control of a c-di-GMP phosphodiesterase by a regulatory PAS domain.
Nat Commun, 15, 2024
3H9O
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BU of 3h9o by Molmil
Phosphoinositide-dependent protein kinase 1 (PDK-1) in complex with compound 9
Descriptor: 2-(1H-imidazol-1-yl)-9-methoxy-8-(2-methoxyethoxy)benzo[c][2,7]naphthyridin-4-amine, 3-phosphoinositide-dependent protein kinase 1
Authors:Olland, A.M.
Deposit date:2009-04-30
Release date:2009-08-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Benzo[c][2,7]naphthyridines as inhibitors of PDK-1
Bioorg.Med.Chem.Lett., 19, 2009
9BAX
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BU of 9bax by Molmil
PI4KA complex bound to C-terminus of EFR3A
Descriptor: Hyccin, Phosphatidylinositol 4-kinase alpha, Protein EFR3 homolog A, ...
Authors:Shaw, A.L, Suresh, S, Yip, C.K, Burke, J.E.
Deposit date:2024-04-04
Release date:2024-11-27
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Molecular basis for plasma membrane recruitment of PI4KA by EFR3.
Sci Adv, 10, 2024
8DYF
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BU of 8dyf by Molmil
IL17A homodimer bound to Compound 10
Descriptor: (5M)-3-[({2-[2-(2-{2-[2-({[(5M)-3-carboxy-5-(5,8-dihydroquinolin-4-yl)phenyl]amino}methyl)phenoxy]ethoxy}ethoxy)ethoxy]phenyl}methyl)amino]-5-(quinolin-4-yl)benzoic acid, Interleukin-17A
Authors:Argiriadi, M.A, Goedken, E.R.
Deposit date:2022-08-04
Release date:2022-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Identification and structure-based drug design of cell-active inhibitors of interleukin 17A at a novel C-terminal site.
Sci Rep, 12, 2022
8UF3
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BU of 8uf3 by Molmil
Structure of cytochrome c4 from Neisseria gonorrhoeae
Descriptor: Cytochrome C4, HEME C, SULFATE ION
Authors:Zhong, F, Ragusa, M.J, Pletneva, E.V.
Deposit date:2023-10-03
Release date:2024-09-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The structure of the diheme cytochrome c 4 from Neisseria gonorrhoeae reveals multiple contributors to tuning reduction potentials.
J.Inorg.Biochem., 253, 2024
6F63
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BU of 6f63 by Molmil
Crystal structure of the SYCP1 C-terminal back-to-back assembly
Descriptor: Synaptonemal complex protein 1
Authors:Dunce, J.M, Millan, C, Uson, I, Davies, O.R.
Deposit date:2017-12-04
Release date:2018-06-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
4X4B
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BU of 4x4b by Molmil
RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 2.1 MGy
Descriptor: 35-MER DNA, MAGNESIUM ION, Regulatory protein
Authors:Bury, C.S, McGeehan, J.E, Garman, E.F.
Deposit date:2014-12-02
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Radiation damage to nucleoprotein complexes in macromolecular crystallography.
J.Synchrotron Radiat., 22, 2015
4Q6V
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BU of 4q6v by Molmil
LpoB C-terminal domain from Salmonella enterica (Sel-Met)
Descriptor: Penicillin-binding protein activator LpoB
Authors:King, D.T, Strynadka, N.C.J.
Deposit date:2014-04-23
Release date:2014-05-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Insights into the Lipoprotein Outer Membrane Regulator of Penicillin-binding Protein 1B.
J.Biol.Chem., 289, 2014
6UKM
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BU of 6ukm by Molmil
STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound MSA-2
Descriptor: 4-(5,6-dimethoxy-1-benzothiophen-2-yl)-4-oxobutanoic acid, fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-05
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
8S50
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BU of 8s50 by Molmil
Cryo-EM structure of the C terminal region of PTX3 with a section of coiled-coil
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pentraxin-related protein PTX3
Authors:Snee, M, Shah, A, Lockhart-Cairns, M, Collins, R, Levy, C, Baldock, C, Day, A.
Deposit date:2024-02-22
Release date:2025-01-22
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:The structural organisation of pentraxin-3 and its interactions with heavy chains of inter-alpha-inhibitor regulate crosslinking of the hyaluronan matrix.
Matrix Biol., 136, 2025
260D
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BU of 260d by Molmil
CRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART II
Descriptor: DNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*TP*GP*C)-3')
Authors:Ban, C, Sundaralingam, M.
Deposit date:1996-05-21
Release date:1996-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the self-complementary 5'-purine start decamer d(GCACGCGTGC) in the A-DNA conformation. II.
Biophys.J., 71, 1996
7Z21
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BU of 7z21 by Molmil
BAF A12T bound to the lamin A/C Ig-fold domain
Descriptor: Barrier-to-autointegration factor, N-terminally processed, CHLORIDE ION, ...
Authors:Marcelot, A, Legrand, P, Zinn-Justin, S.
Deposit date:2022-02-25
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.629 Å)
Cite:The BAF A12T mutation disrupts lamin A/C interaction, impairing robust repair of nuclear envelope ruptures in Nestor-Guillermo progeria syndrome cells.
Nucleic Acids Res., 50, 2022
6UKU
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BU of 6uku by Molmil
STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound 3
Descriptor: 4,4'-[propane-1,3-diylbis(6-methoxy-1-benzothiene-5,2-diyl)]bis(4-oxobutanoic acid), fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-06
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
6UL0
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BU of 6ul0 by Molmil
STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound 4
Descriptor: 4-{5-[(1Z)-3-{[2-(3-carboxypropanoyl)-6-methoxy-1-benzothiophen-5-yl]oxy}prop-1-en-1-yl]-6-methoxy-1-benzothiophen-2-yl}-4-oxobutanoic acid, fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-06
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
4XHV
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BU of 4xhv by Molmil
Crystal structure of Drosophila Spinophilin-PDZ and a C-terminal peptide of Neurexin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, LP20995p, ...
Authors:Driller, J.H, Muhammad, K.G.H, Reddy, S, Rey, U, Boehme, M.A, Hollmann, C, Ramesh, N, Depner, H, Luetzkendorf, J, Matkovic, T, Bergeron, D, Quentin, C, Schmoranzer, J, Goettfert, F, Holt, M, Wahl, M.C, Hell, S.W, Walter, A, Sigrist, S.J, Loll, B.
Deposit date:2015-01-06
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Presynaptic spinophilin tunes neurexin signalling to control active zone architecture and function.
Nat Commun, 6, 2015
2LM7
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BU of 2lm7 by Molmil
NMR structure of the C-terminal domain of VP7 in membrane mimicking micelles
Descriptor: Outer capsid glycoprotein VP7
Authors:Elaid, S, Libersou, S, Ouldali, M, Morellet, N, Lepault, J, Bouaziz, S.
Deposit date:2011-11-23
Release date:2012-10-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of the C-terminal domain of VP7 in membrane mimicking micelles
To be Published
7STE
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BU of 7ste by Molmil
Rad24-RFC ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Checkpoint protein RAD24, ...
Authors:Castaneda, J.C, Schrecker, M, Remus, D, Hite, R.K.
Deposit date:2021-11-12
Release date:2022-04-06
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Mechanisms of loading and release of the 9-1-1 checkpoint clamp.
Nat.Struct.Mol.Biol., 29, 2022
7CSI
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BU of 7csi by Molmil
Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Sisomicin
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aminoglycoside 2'-N-acetyltransferase, COENZYME A
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-14
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
9GLG
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BU of 9glg by Molmil
X-ray structure of the Thermus thermophilus Q218E mutant of the PilF-GSPIIB domain in the c-di-GMP bound state
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ACETATE ION, ATP-binding motif-containing protein pilF, ...
Authors:Neissner, K, Woehnert, J.
Deposit date:2024-08-27
Release date:2025-06-25
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protonated Glutamate and Aspartate Side Chains Can Recognize Phosphodiester Groups via Strong and Short Hydrogen Bonds in Biomacromolecular Complexes.
Angew.Chem.Int.Ed.Engl., 64, 2025
6PEX
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BU of 6pex by Molmil
An aldo keto reductase with 2-keto- L-gulonate reductase activity
Descriptor: aldo keto reductase
Authors:Yong, J, Crystal, S, Robert, D.H, John, B.B.
Deposit date:2019-06-21
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.581 Å)
Cite:An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C inVitis vinifera.
J.Biol.Chem., 294, 2019
6MUD
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BU of 6mud by Molmil
Voltage-gated sodium channel NaV1.5 C-terminal domain in complex with Ca2+/Calmodulin
Descriptor: CALCIUM ION, Calmodulin-1, Sodium channel protein type 5 subunit alpha
Authors:Gardill, B.R, Tung, C.C, Van Petegem, F.
Deposit date:2018-10-23
Release date:2019-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structures of Ca2+-calmodulin bound to NaVC-terminal regions suggest role for EF-hand domain in binding and inactivation.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S0B
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BU of 6s0b by Molmil
Crystal Structure of Properdin in complex with the CTC domain of C3/C3b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3, Properdin, ...
Authors:van den Bos, R.M, Pearce, N.M, Gros, P.
Deposit date:2019-06-14
Release date:2019-09-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Insights Into Enhanced Complement Activation by Structures of Properdin and Its Complex With the C-Terminal Domain of C3b.
Front Immunol, 10, 2019
6PWK
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BU of 6pwk by Molmil
Vibrio cholerae LapD S helix-GGDEF-EAL (bound to c-di-GMP)
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), GGDEF and EAL domain-containing protein, MAGNESIUM ION
Authors:Giglio, K.M, Cooley, R.B, Sondermann, H.
Deposit date:2019-07-23
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae.
Mbio, 10, 2019
8CE8
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BU of 8ce8 by Molmil
Cytochrome c maturation complex CcmABCDE
Descriptor: Cytochrome c biogenesis ATP-binding export protein CcmA, Cytochrome c-type biogenesis protein CcmE, Heme exporter protein B, ...
Authors:Ilcu, L, Zhang, L, Einsle, O.
Deposit date:2023-02-01
Release date:2023-09-06
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:Architecture of the Heme-translocating CcmABCD/E complex required for Cytochrome c maturation.
Nat Commun, 14, 2023

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