Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DLN
DownloadVisualize
BU of 4dln by Molmil
Crystal structure of the CFTR inhibitory factor Cif with the D129S mutation
Descriptor: Putative hydrolase
Authors:Bahl, C.D, Amacher, J.F, Madden, D.R.
Deposit date:2012-02-06
Release date:2013-08-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Inhibiting an Epoxide Hydrolase Virulence Factor from Pseudomonas aeruginosa Protects CFTR.
Angew.Chem.Int.Ed.Engl., 54, 2015
4DM7
DownloadVisualize
BU of 4dm7 by Molmil
Crystal structure of the CFTR inhibitory factor Cif with the E153D mutation
Descriptor: Putative hydrolase
Authors:Bahl, C.D, Madden, D.R.
Deposit date:2012-02-07
Release date:2013-08-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Inhibiting an Epoxide Hydrolase Virulence Factor from Pseudomonas aeruginosa Protects CFTR.
Angew.Chem.Int.Ed.Engl., 54, 2015
6BJZ
DownloadVisualize
BU of 6bjz by Molmil
Crystal Structure of the Fab fragment of humanized 5c8 antibody containing the fluorescent non-canonical amino acid L-(7-hydroxycoumarin-4-yl)ethylglycine at pH 5.5
Descriptor: 5c8 Fab Heavy chain, 5c8 Fab Light chain
Authors:Henderson, J.N, Simmons, C.R, Mills, J.H.
Deposit date:2017-11-07
Release date:2018-11-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Insights into How Protein Environments Tune the Spectroscopic Properties of a Noncanonical Amino Acid Fluorophore.
Biochemistry, 59, 2020
4CS3
DownloadVisualize
BU of 4cs3 by Molmil
Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in complex with an adenylated furan-bearing noncanonical amino acid and pyrophosphate
Descriptor: 1,2-ETHANEDIOL, 2-(furan-2-yl)ethyl hydrogen carbonate, ADENOSINE MONOPHOSPHATE, ...
Authors:Schmidt, M.J, Weber, A, Pott, M, Welte, W, Summerer, D.
Deposit date:2014-03-04
Release date:2014-04-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structural Basis of Furan-Amino Acid Recognition by a Polyspecific Aminoacyl-tRNA-Synthetase and its Genetic Encoding in Human Cells.
Chembiochem, 15, 2014
3ZVI
DownloadVisualize
BU of 3zvi by Molmil
Methylaspartate ammonia lyase from Clostridium tetanomorphum mutant L384A
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Raj, H, Szymanski, W, de Villiers, J, Rozeboom, H.J, Veetil, V.P, Reis, C.R, de Villiers, M, de Wildeman, S, Dekker, F.J, Quax, W.J, Thunnissen, A.M.W.H, Feringa, B.L, Janssen, D.B, Poelarends, G.J.
Deposit date:2011-07-25
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineering Methylaspartate Ammonia Lyase for the Asymmetric Synthesis of Unnatural Amino Acids.
Nat.Chem., 4, 2012
4CE5
DownloadVisualize
BU of 4ce5 by Molmil
First crystal structure of an (R)-selective omega-transaminase from Aspergillus terreus
Descriptor: AT-OMEGATA, CALCIUM ION, CHLORIDE ION, ...
Authors:Lyskowski, A, Gruber, C, Steinkellner, G, Schurmann, M, Schwab, H, Gruber, K, Steiner, K.
Deposit date:2013-11-08
Release date:2014-02-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal Structure of an (R)-Selective Omega-Transaminase from Aspergillus Terreus
Plos One, 9, 2014
4EX7
DownloadVisualize
BU of 4ex7 by Molmil
Crystal structure of the alnumycin P phosphatase in complex with free phosphate
Descriptor: AlnB, BORIC ACID, MAGNESIUM ION, ...
Authors:Oja, T, Niiranen, L, Sandalova, T, Klika, K.D, Niemi, J, Mantsala, P, Schneider, G, Metsa-Ketela, M.
Deposit date:2012-04-30
Release date:2013-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for C-ribosylation in the alnumycin A biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 110, 2013
4EX8
DownloadVisualize
BU of 4ex8 by Molmil
Crystal structure of the prealnumycin C-glycosynthase AlnA
Descriptor: AlnA, CALCIUM ION, CHLORIDE ION, ...
Authors:Oja, T, Niiranen, L, Sandalova, T, Klika, K.D, Niemi, J, Mantsala, P, Schneider, G, Metsa-Ketela, M.
Deposit date:2012-04-30
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for C-ribosylation in the alnumycin A biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 110, 2013
4BK2
DownloadVisualize
BU of 4bk2 by Molmil
Crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: Q301E mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATIDYLGLYCEROL-PHOSPHOGLYCEROL, PROBABLE SALICYLATE MONOOXYGENASE
Authors:Orru, R, Montersino, S, Barendregt, A, Westphal, A.H, van Duijn, E, Mattevi, A, van Berkel, W.J.H.
Deposit date:2013-04-21
Release date:2013-07-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal Structure of 3-Hydroxybenzoate 6-Hydroxylase Uncovers Lipid-Assisted Flavoprotein Strategy for Regioselective Aromatic Hydroxylation
J.Biol.Chem., 288, 2013
4C77
DownloadVisualize
BU of 4c77 by Molmil
Phenylacetone monooxygenase: oxidised R337K mutant in complex with APADP
Descriptor: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, HEXAETHYLENE GLYCOL, ...
Authors:Martinoli, C, Fraaije, M.W, Mattevi, A.
Deposit date:2013-09-19
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Beyond the Protein Matrix: Probing Cofactor Variants in a Baeyer-Villiger Oxygenation Reaction.
Acs Catal., 3, 2013
4EUS
DownloadVisualize
BU of 4eus by Molmil
Crystal structure of the CFTR inhibitory factor Cif bound to 1,2-hexanediol
Descriptor: (2S)-hexane-1,2-diol, Putative hydrolase
Authors:Bahl, C.D, Madden, D.R.
Deposit date:2012-04-25
Release date:2013-08-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Visualizing the Mechanism of Epoxide Hydrolysis by the Bacterial Virulence Enzyme Cif.
Biochemistry, 55, 2016
3ZVH
DownloadVisualize
BU of 3zvh by Molmil
Methylaspartate ammonia lyase from Clostridium tetanomorphum mutant Q73A
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Raj, H, Szymanski, W, de Villiers, J, Rozeboom, H.J, Veetil, V.P, Reis, C.R, de Villiers, M, de Wildeman, S, Dekker, F.J, Quax, W.J, Thunnissen, A.M.W.H, Feringa, B.L, Janssen, D.B, Poelarends, G.J.
Deposit date:2011-07-25
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Engineering Methylaspartate Ammonia Lyase for the Asymmetric Synthesis of Unnatural Amino Acids.
Nat.Chem., 4, 2012
4CCY
DownloadVisualize
BU of 4ccy by Molmil
Crystal structure of carboxylesterase CesB (YbfK) from Bacillus subtilis
Descriptor: CARBOXYLESTERASE YBFK, SODIUM ION
Authors:Rozeboom, H.J, Godinho, L.F, Nardini, M, Quax, W.J, Dijkstra, B.W.
Deposit date:2013-10-29
Release date:2014-01-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal Structures of Two Bacillus Carboxylesterases with Different Enantioselectivities.
Biochim.Biophys.Acta, 1844, 2014
4C74
DownloadVisualize
BU of 4c74 by Molmil
Phenylacetone monooxygenase: Reduced enzyme in complex with APADP
Descriptor: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, HEXAETHYLENE GLYCOL, ...
Authors:Martinoli, C, Fraaije, M.W, Mattevi, A.
Deposit date:2013-09-19
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Beyond the Protein Matrix: Probing Cofactor Variants in a Baeyer-Villiger Oxygenation Reaction.
Acs Catal., 3, 2013
4CS4
DownloadVisualize
BU of 4cs4 by Molmil
Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in complex with AMPPNP
Descriptor: 1,2-ETHANEDIOL, 2-{[dihydroxy(4-aminoethylphenyl)-{4}-sulfanyl]amino}-3-hydroxypropanoic acid, MAGNESIUM ION, ...
Authors:Schmidt, M.J, Weber, A, Pott, M, Welte, W, Summerer, D.
Deposit date:2014-03-04
Release date:2014-04-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Structural Basis of Furan-Amino Acid Recognition by a Polyspecific Aminoacyl-tRNA-Synthetase and its Genetic Encoding in Human Cells.
Chembiochem, 15, 2014
4CS2
DownloadVisualize
BU of 4cs2 by Molmil
Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in its apo form
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PYRROLYSINE--TRNA LIGASE
Authors:Schmidt, M.J, Weber, A, Pott, M, Welte, W, Summerer, D.
Deposit date:2014-03-04
Release date:2014-04-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of Furan-Amino Acid Recognition by a Polyspecific Aminoacyl-tRNA-Synthetase and its Genetic Encoding in Human Cells.
Chembiochem, 15, 2014
4D7E
DownloadVisualize
BU of 4d7e by Molmil
An unprecedented NADPH domain conformation in Lysine Monooxygenase NbtG from Nocardia farcinica
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-LYS MONOOXYGENASE
Authors:Binda, C, Robinson, R, Keul, N, Rodriguez, P, Robinson, H.H, Mattevi, A, Sobrado, P.
Deposit date:2014-11-24
Release date:2015-04-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An Unprecedented Nadph Domain Conformation in Lysine Monooxygenase Nbtg Provides Insights Into Uncoupling of Oxygen Consumption from Substrate Hydroxylation.
J.Biol.Chem., 290, 2015
2YM1
DownloadVisualize
BU of 2ym1 by Molmil
SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: Arg337Lys MUTANT IN COMPLEX WITH NADP
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Orru, R, Dudek, H.M, Martinoli, C, Torres Pazmino, D.E, Royant, A, Weik, M, Fraaije, M.W, Mattevi, A.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization.
J.Biol.Chem., 286, 2011
3NYF
DownloadVisualize
BU of 3nyf by Molmil
Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Histidine
Descriptor: (2Z)-3-(1H-imidazol-5-yl)-2-iminopropanoic acid, D-Arginine Dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Fu, G, Weber, I.T.
Deposit date:2010-07-15
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Conformational changes and substrate recognition in Pseudomonas aeruginosa D-arginine dehydrogenase.
Biochemistry, 49, 2010
2YLS
DownloadVisualize
BU of 2yls by Molmil
SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: REDUCED ENZYME BOUND TO NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHENYLACETONE MONOOXYGENASE
Authors:Orru, R, Dudek, H.M, Martinoli, C, Torres Pazmino, D.E, Royant, A, Weik, M, Fraaije, M.W, Mattevi, A.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization.
J.Biol.Chem., 286, 2011
3O73
DownloadVisualize
BU of 3o73 by Molmil
Crystal structure of quinone reductase 2 in complex with the indolequinone MAC627
Descriptor: 5-[(4-aminobutyl)amino]-1,2-dimethyl-3-[(4-nitrophenoxy)methyl]-1H-indole-4,7-dione, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Dufour, M, Yan, C, Colucci, M.A, Siegel, D, Li, Y, De Matteis, C.I, Ross, D, Moody, C.J.
Deposit date:2010-07-30
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism-Based Inhibition of Quinone Reductase 2 (NQO2): Selectivity for NQO2 over NQO1 and Structural Basis for Flavoprotein Inhibition.
Chembiochem, 12, 2011
2YM2
DownloadVisualize
BU of 2ym2 by Molmil
SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: Arg337Lys MUTANT REDUCED STATE WITH NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHENYLACETONE MONOOXYGENASE
Authors:Orru, R, Dudek, H.M, Martinoli, C, Torres Pazmino, D.E, Royant, A, Weik, M, Fraaije, M.W, Mattevi, A.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization.
J.Biol.Chem., 286, 2011
3OPZ
DownloadVisualize
BU of 3opz by Molmil
Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody
Descriptor: 1,4-DIETHYLENE DIOXIDE, SODIUM ION, Trans-sialidase, ...
Authors:Larrieux, N, Muia, R, Campetella, O, Buschiazzo, A.
Deposit date:2010-09-02
Release date:2011-11-09
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Trypanosoma cruzi trans-sialidase in complex with a neutralizing antibody: structure/function studies towards the rational design of inhibitors.
Plos Pathog., 8, 2012
3Q1Y
DownloadVisualize
BU of 3q1y by Molmil
Allosteric regulation by Lysine residue: A novel anion-hole formation in the ribokinase family
Descriptor: GLYCEROL, Lin2199 protein, POTASSIUM ION
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-18
Release date:2011-01-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Allosteric regulation by Lysine residue: A novel anion-hole formation in the ribokinase family
To be Published
3PI6
DownloadVisualize
BU of 3pi6 by Molmil
Crystal structure of the CFTR inhibitory factor Cif with the H177Y mutation
Descriptor: hydrolase
Authors:Bahl, C.D, Madden, D.R.
Deposit date:2010-11-05
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Pseudomonas aeruginosa Cif defines a distinct class of alpha/beta epoxide hydrolases utilizing a His/Tyr ring-opening pair.
Protein Pept.Lett., 19, 2012

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon