Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2GFE
DownloadVisualize
BU of 2gfe by Molmil
Crystal structure of the GluR2 A476E S673D Ligand Binding Core Mutant at 1.54 Angstroms Resolution
Descriptor: GLUTAMIC ACID, Glutamate receptor 2, ZINC ION
Authors:Mayer, M.L.
Deposit date:2006-03-21
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Interdomain interactions in AMPA and kainate receptors regulate affinity for glutamate.
J.Neurosci., 26, 2006
5LP7
DownloadVisualize
BU of 5lp7 by Molmil
Crystal structure of 3-Ketoacyl-CoA Thiolase (MmgA) from Bacillus subtilis.
Descriptor: Acetyl-CoA acetyltransferase, GLYCEROL
Authors:Baker, G.E, Race, P.R.
Deposit date:2016-08-11
Release date:2016-08-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of 3-Ketoacyl-CoA Thiolase (MmgA) from Bacillus subtilis.
To Be Published
7AAS
DownloadVisualize
BU of 7aas by Molmil
Crystal structure of nitrosoglutathione reductase (GSNOR) from Chlamydomonas reinhardtii
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, S-(hydroxymethyl)glutathione dehydrogenase, ...
Authors:Fermani, S, Zaffagnini, M, Falini, G, Lemaire, S.D.
Deposit date:2020-09-04
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional insights into nitrosoglutathione reductase from Chlamydomonas reinhardtii.
Redox Biol, 38, 2020
2G5T
DownloadVisualize
BU of 2g5t by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ag
Descriptor: 3-{[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHOXY}-4-CHLOROBENZOIC ACID, Dipeptidyl peptidase 4
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-23
Release date:2006-07-04
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
7LRY
DownloadVisualize
BU of 7lry by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with DNA, (-)FTC-TP, and CA(2+) ion
Descriptor: AMMONIUM ION, CALCIUM ION, DNA/RNA (38-MER), ...
Authors:Hoang, A, Ruiz, F.X, Arnold, E.
Deposit date:2021-02-17
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis of HIV inhibition by L-nucleosides: Opportunities for drug development and repurposing.
Drug Discov Today, 27, 2022
2GGE
DownloadVisualize
BU of 2gge by Molmil
Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A
Descriptor: CHLORIDE ION, MAGNESIUM ION, yitF
Authors:Malashkevich, V.N, Sauder, J.M, Schwinn, K.D, Emtage, S, Thompson, D.A, Rutter, M.E, Dickey, M, Groshong, C, Bain, K.T, Adams, J.M, Reyes, C, Rooney, I, Powell, A, Boice, A, Gheyi, T, Ozyurt, S, Atwell, S, Wasserman, S.R, Burley, S.K, Sali, A, Babbitt, P, Pieper, U, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-03-23
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A
To be Published
7E6J
DownloadVisualize
BU of 7e6j by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH) H725A in complex with Factor X peptide fragment (39mer-4Ser)
Descriptor: Aspartyl/asparaginyl beta-hydroxylase, GLYCEROL, PROPANOIC ACID, ...
Authors:Nakashima, Y, Brasnett, A, Brewitz, L, Schofield, C.J.
Deposit date:2021-02-22
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human Oxygenase Variants Employing a Single Protein Fe II Ligand Are Catalytically Active.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ACD
DownloadVisualize
BU of 7acd by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound T30 (UZH1a)
Descriptor: 4-[(4,4-dimethylpiperidin-1-yl)methyl]-2-oxidanyl-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide, ACETATE ION, MAGNESIUM ION, ...
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2020-09-10
Release date:2020-10-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:METTL3 Inhibitors for Epitranscriptomic Modulation of Cellular Processes.
Chemmedchem, 16, 2021
7LHK
DownloadVisualize
BU of 7lhk by Molmil
High-Resolution Crystal Structure of a Lipin/Pah Phosphatidic Acid Phosphatase
Descriptor: CACODYLATE ION, Nuclear elongation and deformation protein
Authors:Khayyo, V.I, Airola, M.V.
Deposit date:2021-01-25
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-resolution structure of phosphatidic acid phosphohydrolase from Tetrahymena thermophila
To be published
7E8I
DownloadVisualize
BU of 7e8i by Molmil
Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin
Descriptor: BRCA1-associated RING domain protein 1, DNA (145-MER), Histone H2A, ...
Authors:Dai, Y, Dai, L, Zhou, Z.
Deposit date:2021-03-01
Release date:2021-06-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin.
Mol.Cell, 81, 2021
2ZT8
DownloadVisualize
BU of 2zt8 by Molmil
Crystal structure of human Glycyl-tRNA synthetase (GlyRS) in complex with Gly-AMP analog
Descriptor: Glycyl-tRNA synthetase, [(2S,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (aminoacetyl)sulfamate
Authors:Guo, R.T, Yang, X.L, Schimmel, P.
Deposit date:2008-09-19
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal structures and biochemical analyses suggest unique mechanism and role for human GlyRS in Ap4A homeostasis
To be Published
8R18
DownloadVisualize
BU of 8r18 by Molmil
Pim1 in complex with (E)-4-(4-hydroxystyryl)benzoic acid and Pimtide
Descriptor: (E)-4-(4-hydroxystyryl)benzoic acid, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Hochban, P.M.M, Heine, A, Diederich, W.E.
Deposit date:2023-11-01
Release date:2024-03-20
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:What doesn't fit is made to fit: Pim-1 kinase adapts to the configuration of stilbene-based inhibitors.
Arch Pharm, 357, 2024
2ZTI
DownloadVisualize
BU of 2zti by Molmil
Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
Descriptor: MANGANESE (II) ION, NTPASE
Authors:Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-10-06
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
J.Mol.Biol., 375, 2008
7PFC
DownloadVisualize
BU of 7pfc by Molmil
Nucleosome stack of the 4x197 nucleosome array containing H1
Descriptor: DNA (788-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7V3J
DownloadVisualize
BU of 7v3j by Molmil
DENV2:F(ab')2-local
Descriptor: Envelope protein E, Fab_C10_heavy_chain, Fab_C10_light_chain, ...
Authors:Shu, B, Zhang, S, Victor, A.K, Ng, T.S, Lok, S.M.
Deposit date:2021-08-10
Release date:2021-12-29
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Human antibody C10 neutralizes by diminishing Zika but enhancing dengue virus dynamics.
Cell, 184, 2021
5LRG
DownloadVisualize
BU of 5lrg by Molmil
Crystal structure of the porcine carboxypeptidase B - Anabaenopeptin B complex
Descriptor: Anabaenopeptin B, Carboxypeptidase B, ZINC ION
Authors:Schreuder, H, Liesum, A, Loenze, P.
Deposit date:2016-08-19
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Isolation, Co-Crystallization and Structure-Based Characterization of Anabaenopeptins as Highly Potent Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (TAFIa).
Sci Rep, 6, 2016
2Z9U
DownloadVisualize
BU of 2z9u by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution
Descriptor: Aspartate aminotransferase, GLYCEROL, SULFATE ION
Authors:Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
Deposit date:2007-09-26
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
8R10
DownloadVisualize
BU of 8r10 by Molmil
Pim1 in complex with 4-(4-hydroxystyryl)benzoic acid and Pimtide
Descriptor: (Z)-4-(4-hydroxystyryl)benzoic acid, Pimtide, Serine/threonine-protein kinase pim-1
Authors:Hochban, P.M.M, Heine, A, Diederich, W.E.
Deposit date:2023-11-01
Release date:2024-03-20
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:What doesn't fit is made to fit: Pim-1 kinase adapts to the configuration of stilbene-based inhibitors.
Arch Pharm, 357, 2024
6ZZR
DownloadVisualize
BU of 6zzr by Molmil
The Crystal Structure of human LDHA from Biortus.
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, L-lactate dehydrogenase A chain
Authors:Wang, F, Lin, D, Cheng, W, Bao, X, Zhu, B, Shang, H.
Deposit date:2020-08-05
Release date:2020-08-19
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Crystal Structure of human LDHA from Biortus
To Be Published
7PET
DownloadVisualize
BU of 7pet by Molmil
The 4x177 nucleosome array containing H1
Descriptor: DNA (702-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
2OJG
DownloadVisualize
BU of 2ojg by Molmil
Crystal structure of ERK2 in complex with N,N-dimethyl-4-(4-phenyl-1H-pyrazol-3-yl)-1H-pyrrole-2-carboxamide
Descriptor: Mitogen-activated protein kinase 1, N,N-DIMETHYL-4-(4-PHENYL-1H-PYRAZOL-3-YL)-1H-PYRROLE-2-CARBOXAMIDE, SULFATE ION
Authors:Xie, X, Jacobs, M.D.
Deposit date:2007-01-12
Release date:2007-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flipped Out: Structure-Guided Design of Selective Pyrazolylpyrrole ERK Inhibitors.
J.Med.Chem., 50, 2007
7PFU
DownloadVisualize
BU of 7pfu by Molmil
Nucleosome stack of the 4x207 nucleosome array containing H1
Descriptor: DNA (591-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-12
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7EF0
DownloadVisualize
BU of 7ef0 by Molmil
Crystal structure of maize SHH2 SAWADEE domain in complex with an H3K9M peptide
Descriptor: HB transcription factor, Histone H3.2, ZINC ION
Authors:Wang, Y, Du, J.
Deposit date:2021-03-20
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
5LVN
DownloadVisualize
BU of 5lvn by Molmil
Human PDK1 Kinase Domain in Complex with Adenosine Bound to the ATP-Binding Site
Descriptor: 3-phosphoinositide-dependent protein kinase 1, ADENOSINE, CHLORIDE ION, ...
Authors:Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
Deposit date:2016-09-14
Release date:2016-10-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.379 Å)
Cite:Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
8R1J
DownloadVisualize
BU of 8r1j by Molmil
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B.
Descriptor: Acidic leucine-rich nuclear phosphoprotein 32 family member B, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Carrique, L, Staller, E, Keown, J.R, Fan, H, Fodor, E, Grimes, J.M.
Deposit date:2023-11-02
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of H5N1 influenza polymerase with ANP32B reveal mechanisms of genome replication and host adaptation.
Nat Commun, 15, 2024

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon