Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2O8D
DownloadVisualize
BU of 2o8d by Molmil
human MutSalpha (MSH2/MSH6) bound to ADP and a G dU mispair
Descriptor: 5'-D(*CP*CP*TP*AP*GP*CP*GP*(DU)P*GP*CP*GP*GP*TP*TP*C)-3', 5'-D(*GP*AP*AP*CP*CP*GP*CP*GP*CP*GP*CP*TP*AP*GP*G)-3', ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Warren, J.J, Pohlhaus, T.J, Changela, A, Modrich, P.L, Beese, L.S.
Deposit date:2006-12-12
Release date:2007-06-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Human MutSalpha DNA Lesion Recognition Complex.
Mol.Cell, 26, 2007
2QUV
DownloadVisualize
BU of 2quv by Molmil
Phosphate ions in fructose-1,6-bisphosphate aldolase from rabbit muscle
Descriptor: Fructose-bisphosphate aldolase A, PHOSPHATE ION
Authors:St-Jean, M, Sygusch, J.
Deposit date:2007-08-06
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Stereospecific proton transfer by a mobile catalyst in mammalian fructose-1,6-bisphosphate aldolase
J.Biol.Chem., 282, 2007
2QUU
DownloadVisualize
BU of 2quu by Molmil
Dihydroxyacetone phosphate Schiff base intermediate in mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase A
Authors:St-Jean, M, Sygusch, J.
Deposit date:2007-08-06
Release date:2007-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Stereospecific proton transfer by a mobile catalyst in mammalian fructose-1,6-bisphosphate aldolase
J.Biol.Chem., 282, 2007
2O8F
DownloadVisualize
BU of 2o8f by Molmil
human MutSalpha (MSH2/MSH6) bound to DNA with a single base T insert
Descriptor: 5'-D(*CP*GP*CP*TP*AP*GP*CP*GP*TP*GP*CP*GP*GP*CP*CP*GP*TP*C)-3', 5'-D(*GP*AP*CP*GP*GP*CP*CP*GP*CP*CP*GP*CP*TP*AP*GP*CP*G)-3', ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Warren, J.J, Pohlhaus, T.J, Changela, A, Modrich, P.L, Beese, L.S.
Deposit date:2006-12-12
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure of the Human MutSalpha DNA Lesion Recognition Complex.
Mol.Cell, 26, 2007
2PHE
DownloadVisualize
BU of 2phe by Molmil
Model for VP16 binding to PC4
Descriptor: Alpha trans-inducing protein, TRANSCRIPTIONAL COACTIVATOR PC4
Authors:Jonker, H.R.A, Wechselberger, R.W, Boelens, R, Folkers, G.E, Kaptein, R.
Deposit date:2007-04-11
Release date:2007-04-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Properties of the Promiscuous VP16 Activation Domain
Biochemistry, 44, 2005
2QZV
DownloadVisualize
BU of 2qzv by Molmil
Draft Crystal Structure of the Vault Shell at 9 Angstroms Resolution
Descriptor: Major vault protein
Authors:Anderson, D.H, Kickhoefer, V.A, Sievers, S.A, Rome, L.H, Eisenberg, D.
Deposit date:2007-08-17
Release date:2007-12-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (9 Å)
Cite:Draft crystal structure of the vault shell at 9-A resolution.
Plos Biol., 5, 2007
2QQS
DownloadVisualize
BU of 2qqs by Molmil
JMJD2A tandem tudor domains in complex with a trimethylated histone H4-K20 peptide
Descriptor: JmjC domain-containing histone demethylation protein 3A, METHYLATED HISTONE H4 PEPTIDE
Authors:Lee, J, Botuyan, M.V, Mer, G.
Deposit date:2007-07-26
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor.
Nat.Struct.Mol.Biol., 15, 2008
2QUT
DownloadVisualize
BU of 2qut by Molmil
Dihydroxyacetone phosphate enamine intermediate in fructose-1,6-bisphosphate aldolase from rabbit muscle
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase A
Authors:St-Jean, M, Sygusch, J.
Deposit date:2007-08-06
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Stereospecific proton transfer by a mobile catalyst in mammalian fructose-1,6-bisphosphate aldolase
J.Biol.Chem., 282, 2007
2RAN
DownloadVisualize
BU of 2ran by Molmil
RAT ANNEXIN V CRYSTAL STRUCTURE: CA2+-INDUCED CONFORMATIONAL CHANGES
Descriptor: ANNEXIN V, CALCIUM ION, SULFATE ION
Authors:Concha, N.O, Head, J.F, Kaetzel, M.A, Dedman, J.R, Seaton, B.A.
Deposit date:1994-09-01
Release date:1994-11-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Rat annexin V crystal structure: Ca(2+)-induced conformational changes.
Science, 261, 1993
2P6N
DownloadVisualize
BU of 2p6n by Molmil
Human DEAD-box RNA helicase DDX41, helicase domain
Descriptor: ATP-dependent RNA helicase DDX41
Authors:Karlberg, T, Ogg, D, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Johansson, I, Kotenyova, T, Lehtio, L, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-03-19
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
2P9I
DownloadVisualize
BU of 2p9i by Molmil
Crystal Structure of bovine Arp2/3 Complex co-crystallized with ADP and crosslinked with gluteraldehyde
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein 2, Actin-like protein 3, ...
Authors:Nolen, B.J, Pollard, T.D.
Deposit date:2007-03-26
Release date:2007-05-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex.
Mol.Cell, 26, 2007
2RD8
DownloadVisualize
BU of 2rd8 by Molmil
Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195
Descriptor: BETA-MERCAPTOETHANOL, PHOSPHATE ION, Thymidylate synthase
Authors:Gibson, L.M, Lovelace, L.L, Lebioda, L.
Deposit date:2007-09-21
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The R163K Mutant of Human Thymidylate Synthase Is Stabilized in an Active Conformation: Structural Asymmetry and Reactivity of Cysteine 195.
Biochemistry, 47, 2008
2RBA
DownloadVisualize
BU of 2rba by Molmil
Structure of Human Thymine DNA Glycosylase Bound to Abasic and Undamaged DNA
Descriptor: DNA (5'-D(*DCP*DAP*DGP*DCP*DTP*DCP*DTP*DGP*DTP*DAP*DCP*DGP*DTP*DGP*DAP*DGP*DCP*DAP*DGP*DTP*DGP*DGP*DA)-3'), DNA (5'-D(*DCP*DCP*DAP*DCP*DTP*DGP*DCP*DTP*DCP*DAP*(3DR)P*DGP*DTP*DAP*DCP*DAP*DGP*DAP*DGP*DCP*DTP*DGP*DT)-3'), G/T mismatch-specific thymine DNA glycosylase
Authors:Maiti, A, Pozharski, E, Drohat, A.C.
Deposit date:2007-09-18
Release date:2008-06-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of human thymine DNA glycosylase bound to DNA elucidates sequence-specific mismatch recognition.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RCW
DownloadVisualize
BU of 2rcw by Molmil
PARP complexed with A620223
Descriptor: Poly [ADP-ribose] polymerase 1, trans-4-(7-carbamoyl-1H-benzimidazol-2-yl)-1-propylpiperidinium
Authors:Park, C.H.
Deposit date:2007-09-20
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:PARP complexed with A620223
To be Published
2OT1
DownloadVisualize
BU of 2ot1 by Molmil
Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with naphthol AS-E phosphate, a competitive inhibitor
Descriptor: Fructose-bisphosphate aldolase A, N-(4-CHLOROPHENYL)-3-(PHOSPHONOOXY)NAPHTHALENE-2-CARBOXAMIDE
Authors:St-Jean, M, Izard, T, Sygusch, J.
Deposit date:2007-02-07
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A hydrophobic pocket in the active site of glycolytic aldolase mediates interactions with wiskott-Aldrich syndrome protein.
J.Biol.Chem., 282, 2007
2P9P
DownloadVisualize
BU of 2p9p by Molmil
Crystal Structure of bovine Arp2/3 complex co-crystallized with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein 2, Actin-like protein 3, ...
Authors:Nolen, B.J, Pollard, T.D.
Deposit date:2007-03-26
Release date:2007-05-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex.
Mol.Cell, 26, 2007
2OO1
DownloadVisualize
BU of 2oo1 by Molmil
Crystal structure of the Bromo domain 2 of human Bromodomain containing protein 3 (BRD3)
Descriptor: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, Bromodomain-containing protein 3, ...
Authors:Filippakopoulos, P, Bullock, A, Papagrigoriou, E, Keates, T, Cooper, C, Smee, C, Ugochukwu, E, Debreczeni, J, von Delft, F, Arrowsmith, C, Edwards, A, Weigelt, J, Sundstrom, M, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2007-01-25
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
2P9S
DownloadVisualize
BU of 2p9s by Molmil
Structure of bovine Arp2/3 complex co-crystallized with ATP/Mg2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein 2, Actin-like protein 3, ...
Authors:Nolen, B.J, Pollard, T.D.
Deposit date:2007-03-26
Release date:2007-05-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex.
Mol.Cell, 26, 2007
2R6M
DownloadVisualize
BU of 2r6m by Molmil
Crystal structure of rat CK2-beta subunit
Descriptor: Casein kinase II subunit beta, ZINC ION
Authors:Shen, Y.
Deposit date:2007-09-06
Release date:2008-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of catalytic and regulatory subunits of rat protein kinase CK2
CHIN.SCI.BULL., 54, 2009
2RRD
DownloadVisualize
BU of 2rrd by Molmil
Structure of HRDC domain from human Bloom syndrome protein, BLM
Descriptor: HRDC domain from Bloom syndrome protein
Authors:Sato, A, Mishima, M, Nagai, A, Kim, S.Y, Ito, Y, Hakoshima, T, Jee, J.G, Kitano, K.
Deposit date:2010-07-19
Release date:2010-09-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the HRDC domain of human Bloom syndrome protein BLM
J.Biochem., 148, 2010
2RD6
DownloadVisualize
BU of 2rd6 by Molmil
PARP complexed with A861695
Descriptor: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium, Poly [ADP-ribose] polymerase 1
Authors:Park, C.H.
Deposit date:2007-09-21
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:PARP complexed with A861695
To be Published
2TSR
DownloadVisualize
BU of 2tsr by Molmil
THYMIDYLATE SYNTHASE FROM RAT IN TERNARY COMPLEX WITH DUMP AND TOMUDEX
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE, TOMUDEX
Authors:Sotelo-Mundo, R.R, Ciesla, J, Dzik, J.M, Rode, W, Maley, F, Maley, G, Hardy, L.W, Montfort, W.R.
Deposit date:1998-06-19
Release date:1999-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of rat thymidylate synthase inhibited by Tomudex, a potent anticancer drug.
Biochemistry, 38, 1999
2RS8
DownloadVisualize
BU of 2rs8 by Molmil
Solution structure of the N-terminal RNA recognition motif of NonO
Descriptor: Non-POU domain-containing octamer-binding protein
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-11-29
Release date:2012-12-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal RNA recognition motif of NonO
To be Published
2RVM
DownloadVisualize
BU of 2rvm by Molmil
Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
6KDB
DownloadVisualize
BU of 6kdb by Molmil
Crystal structure of human DNMT3B-DNMT3L in complex with DNA containing CpGpT site
Descriptor: DNA (25-MER), DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3B, ...
Authors:Lin, C.-C, Chen, Y.-P, Yang, W.-Z, Shen, C.-K, Yuan, H.S.
Deposit date:2019-07-01
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.862 Å)
Cite:Structural insights into CpG-specific DNA methylation by human DNA methyltransferase 3B.
Nucleic Acids Res., 48, 2020

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon