PDB: 224572 resultsInfo pagesStatus searchChemie searchBIRD

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1YML	Crystal Structure of the CDC25B phosphatase catalytic domain with the active site cysteine in the sulfenic form Descriptor: CHLORIDE ION, M-phase inducer phosphatase 2 Authors: Buhrman, G.K, Parker, B, Sohn, J, Rudolph, J, Mattos, C. Deposit date: 2005-01-21 Release date: 2005-04-12 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural Mechanism of Oxidative Regulation of the Phosphatase Cdc25B via an Intramolecular Disulfide Bond Biochemistry, 44, 2005
1YMM	TCR/HLA-DR2b/MBP-peptide complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ... Authors: Hahn, M, Nicholson, M.J, Pyrdol, J, Wucherpfennig, K.W. Deposit date: 2005-01-21 Release date: 2005-05-03 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Unconventional topology of self peptide-major histocompatibility complex binding by a human autoimmune T cell receptor. NAT.IMMUNOL., 6, 2005
1YMN	The study of reductive unfolding pathways of RNase A (Y92L mutant) Descriptor: Ribonuclease pancreatic Authors: Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A. Deposit date: 2005-01-21 Release date: 2006-01-31 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.45 Å) Cite: A localized specific interaction alters the unfolding pathways of structural homologues. J.Am.Chem.Soc., 128, 2006
1YMO	Solution structure of the P2b-P3 pseudoknot from human telomerase RNA Descriptor: Telomerase RNA P2b-P3 pseudoknot Authors: Theimer, C.A, Blois, C.A, Feigon, J. Deposit date: 2005-01-21 Release date: 2005-03-15 Last modified: 2023-11-29 Method: SOLUTION NMR Cite: Structure of the human telomerase RNA pseudoknot reveals conserved tertiary interactions essential for function Mol.Cell, 17, 2005
1YMP	The Crystal Structure of a Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve an Ankyrin Fold Descriptor: Notch 1 protein Authors: Lubman, O.Y, Kopan, R, Waksman, G, Korolev, S. Deposit date: 2005-01-21 Release date: 2005-05-10 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The crystal structure of a partial mouse Notch-1 ankyrin domain: repeats 4 through 7 preserve an ankyrin fold. Protein Sci., 14, 2005
1YMQ	HAD Superfamily Phosphotransferase Substrate Diversification: Structure and Function Analysis of the HAD Subclass IIB Sugar Phosphatase BT4131 Descriptor: MAGNESIUM ION, SULFATE ION, sugar-phosphate phosphatase BT4131 Authors: Lu, Z, Dunaway-Mariano, D, Allen, K.N. Deposit date: 2005-01-21 Release date: 2005-06-28 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.9 Å) Cite: HAD Superfamily Phosphotransferase Substrate Diversification: Structure and Function Analysis of HAD Subclass IIB Sugar Phosphatase BT4131. Biochemistry, 44, 2005
1YMR	The study of reductive unfolding pathways of RNase A (Y92A mutant) Descriptor: Ribonuclease pancreatic Authors: Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A. Deposit date: 2005-01-21 Release date: 2006-01-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: A localized specific interaction alters the unfolding pathways of structural homologues. J.Am.Chem.Soc., 128, 2006
1YMS	X-ray crystallographic structure of CTX-M-9 beta-lactamase complexed with nafcinin-like boronic acid inhibitor Descriptor: [(2-ETHOXY-1-NAPHTHOYL)AMINO]METHYLBORONIC ACID, beta-lactamase CTX-M-9 Authors: Chen, Y, Shoichet, B, Bonnet, R. Deposit date: 2005-01-21 Release date: 2005-04-26 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure, Function, and Inhibition along the Reaction Coordinate of CTX-M beta-Lactamases. J.Am.Chem.Soc., 127, 2005
1YMT	Mouse SF-1 LBD Descriptor: 1-CIS-9-OCTADECANOYL-2-CIS-9-HEXADECANOYL PHOSPHATIDYL GLYCEROL, Nuclear receptor 0B2, Steroidogenic factor 1 Authors: Krylova, I.N, Sablin, E.P, Moore, J, Xu, R.X, Waitt, G.M, Juzumiene, D, Bynum, J.M, Fletterick, R.J, Willson, T.M, Ingraham, H.A. Deposit date: 2005-01-21 Release date: 2005-03-15 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1 Cell(Cambridge,Mass.), 120, 2005
1YMU	SIGNAL TRANSDUCTION PROTEIN CHEY MUTANT WITH MET 17 REPLACED BY GLY (M17G) Descriptor: CHEY Authors: Bellsolell, L, Coll, M. Deposit date: 1995-12-14 Release date: 1996-04-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The three-dimensional structure of two mutants of the signal transduction protein CheY suggest its molecular activation mechanism. J.Mol.Biol., 257, 1996
1YMV	SIGNAL TRANSDUCTION PROTEIN CHEY MUTANT WITH PHE 14 REPLACED BY GLY, SER 15 REPLACED BY GLY, AND MET 17 REPLACED BY GLY Descriptor: CHEY, MAGNESIUM ION Authors: Bellsolell, L, Coll, M. Deposit date: 1995-12-14 Release date: 1996-04-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The three-dimensional structure of two mutants of the signal transduction protein CheY suggest its molecular activation mechanism. J.Mol.Biol., 257, 1996
1YMW	The study of reductive unfolding pathways of RNase A (Y92G mutant) Descriptor: Ribonuclease pancreatic Authors: Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A. Deposit date: 2005-01-21 Release date: 2006-01-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: A localized specific interaction alters the unfolding pathways of structural homologues. J.Am.Chem.Soc., 128, 2006
1YMX	X-ray crystallographic structure of CTX-M-9 beta-lactamase covalently linked to cefoxitin Descriptor: (2R)-5-[(carbamoyloxy)methyl]-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, beta-lactamase CTX-M-9 Authors: Chen, Y, Shoichet, B, Bonnet, R. Deposit date: 2005-01-21 Release date: 2005-04-26 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structure, Function, and Inhibition along the Reaction Coordinate of CTX-M beta-Lactamases. J.Am.Chem.Soc., 127, 2005
1YMY	Crystal Structure of the N-Acetylglucosamine-6-phosphate deacetylase from Escherichia coli K12 Descriptor: N-acetylglucosamine-6-phosphate deacetylase Authors: Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2005-01-21 Release date: 2005-02-01 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of the N-acetylglucosamine-6-phosphate deacetylase from Escherichia Coli To be Published
1YMZ	CC45, An Artificial WW Domain Designed Using Statistical Coupling Analysis Descriptor: CC45 Authors: Socolich, M, Lockless, S.W, Russ, W.P, Lee, H, Gardner, K.H, Ranganathan, R. Deposit date: 2005-01-22 Release date: 2005-09-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Evolutionary information for specifying a protein fold. Nature, 437, 2005
1YN1	Solution structure of the VS ribozyme stem-loop V in the presence of MgCl2 Descriptor: VS RIBOZYME STEM-LOOP V Authors: Campbell, D.O, Legault, P. Deposit date: 2005-01-23 Release date: 2006-01-24 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR structure of varkud satellite ribozyme stem-loop v in the presence of magnesium ions and localization of metal-binding sites Biochemistry, 45, 2006
1YN2	Solution structure of the Neurospora VS ribozyme stem-loop V in the presence of MgCl2 with modeling of bound manganese ions Descriptor: MANGANESE (II) ION, VS RIBOZYME STEM-LOOP V Authors: Campbell, D.O, Legault, P. Deposit date: 2005-01-23 Release date: 2006-01-24 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR structure of varkud satellite ribozyme stem-loop v in the presence of magnesium ions and localization of metal-binding sites Biochemistry, 45, 2006
1YN3	Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens Descriptor: truncated cell surface protein map-w Authors: Geisbrecht, B.V, Hamaoka, B.Y, Perman, B, Zemla, A, Leahy, D.J. Deposit date: 2005-01-23 Release date: 2005-03-01 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.35 Å) Cite: The Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens. J.Biol.Chem., 280, 2005
1YN4	Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens Descriptor: EapH1, ZINC ION Authors: Geisbrecht, B.V, Hamaoka, B.Y, Perman, B, Zemla, A, Leahy, D.J. Deposit date: 2005-01-23 Release date: 2005-03-01 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens. J.Biol.Chem., 280, 2005
1YN5	Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens Descriptor: EapH2 Authors: Geisbrecht, B.V, Hamaoka, B.Y, Perman, B, Zemla, A, Leahy, D.J. Deposit date: 2005-01-23 Release date: 2005-03-01 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens. J.Biol.Chem., 280, 2005
1YN6	Crystal structure of a mouse MHC class I protein, H2-Db, in complex with a peptide from the influenza A acid polymerase Descriptor: 10-mer peptide from RNA-directed RNA polymerase subunit P2, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ... Authors: Turner, S.J, Kedzierska, K, Komodromou, H, La Gruta, N.L, Dunstone, M.A, Webb, A.I, Webby, R, Walden, H, Xie, W, McCluskey, J, Purcell, A.W, Rossjohn, J, Doherty, P.C. Deposit date: 2005-01-23 Release date: 2005-06-28 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Lack of prominent peptide-major histocompatibility complex features limits repertoire diversity in virus-specific CD8+ T cell populations Nat.Immunol., 6, 2005
1YN7	Crystal structure of a mouse MHC class I protein, H2-Db, in complex with a mutated peptide (R7A) of the influenza A acid polymerase Descriptor: 10-mer peptide from RNA-directed RNA polymerase subunit P2, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ... Authors: Turner, S.J, Kedzierska, K, Komodromou, H, La Gruta, N.L, Dunstone, M.A, Webb, A.I, Webby, R, Walden, H, Xie, W, McCluskey, J, Purcell, A.W, Rossjohn, J, Doherty, P.C. Deposit date: 2005-01-24 Release date: 2005-06-28 Last modified: 2021-11-10 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Lack of prominent peptide-major histocompatibility complex features limits repertoire diversity in virus-specific CD8+ T cell populations Nat.Immunol., 6, 2005
1YN8	SH3 domain of yeast NBP2 Descriptor: CALCIUM ION, NAP1-binding protein 2 Authors: Kursula, P, Kursula, I, Song, Y.H, Wilmanns, M. Deposit date: 2005-01-24 Release date: 2006-05-30 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural analysis of the yeast SH3 domain proteome To be Published
1YN9	Crystal structure of baculovirus RNA 5'-phosphatase complexed with phosphate Descriptor: PHOSPHATE ION, polynucleotide 5'-phosphatase Authors: Changela, A, Martins, A, Shuman, S, Mondragon, A. Deposit date: 2005-01-24 Release date: 2005-02-22 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of baculovirus RNA triphosphatase complexed with phosphate J.Biol.Chem., 280, 2005
1YNA	ENDO-1,4-BETA-XYLANASE, ROOM TEMPERATURE, PH 4.0 Descriptor: ENDO-1,4-BETA-XYLANASE Authors: Gruber, K, Kratky, C. Deposit date: 1996-08-22 Release date: 1997-02-12 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Thermophilic xylanase from Thermomyces lanuginosus: high-resolution X-ray structure and modeling studies. Biochemistry, 37, 1998

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