PDB: 226707 resultsInfo pagesStatus searchChemie searchBIRD

---

3EFX	Novel binding site identified in a hybrid between cholera toxin and heat-labile enterotoxin, 1.9A crystal structure reveals the details Descriptor: Cholera enterotoxin subunit B, Heat-labile enterotoxin B chain, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]beta-D-glucopyranose Authors: Holmner, A, Lebens, M, Teneberg, S, Angstrom, J, Okvist, M, Krengel, U. Deposit date: 2008-09-10 Release date: 2008-09-23 Last modified: 2024-04-10 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Novel binding site identified in a hybrid between cholera toxin and heat-labile enterotoxin: 1.9 A crystal structure reveals the details Structure, 12, 2004
4BNA	REVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCG Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3') Authors: Kopka, M.L, Fratini, A.V, Dickerson, R.E. Deposit date: 1982-02-16 Release date: 1982-04-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG. J.Biol.Chem., 257, 1982
190L	A HELIX INITIATION SIGNAL IN T4 LYSOZYME IDENTIFIED BY POLYALANINE MUTAGENESIS Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME Authors: Zhang, X.-J, Matthews, B.W. Deposit date: 1995-06-13 Release date: 1995-09-15 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: A helix initiation signal in T4 lysozyme identified by polyalanine mutagenesis. Biophys.Chem., 101-102, 2002
1AFF	DNA QUADRUPLEX CONTAINING GGGG TETRADS AND (T.A).A TRIADS, NMR, 8 STRUCTURES Descriptor: QUADRUPLEX DNA (5'-D(TP*AP*GP*G)-3') Authors: Kettani, A, Bouaziz, S, Wang, W, Jones, R.A, Patel, D.J. Deposit date: 1997-03-06 Release date: 1997-08-20 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Bombyx mori single repeat telomeric DNA sequence forms a G-quadruplex capped by base triads. Nat.Struct.Biol., 4, 1997
4KBL	Structure of HHARI, a RING-IBR-RING ubiquitin ligase: autoinhibition of an Ariadne-family E3 and insights into ligation mechanism Descriptor: E3 ubiquitin-protein ligase ARIH1, ZINC ION Authors: Duda, D.M, Olszewski, J.L, Schulman, B.A. Deposit date: 2013-04-23 Release date: 2013-05-29 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Structure of HHARI, a RING-IBR-RING Ubiquitin Ligase: Autoinhibition of an Ariadne-Family E3 and Insights into Ligation Mechanism. Structure, 21, 2013
1IXI	PHOSPHATE-BINDING PROTEIN MUTANT WITH ASP 56 REPLACED BY ASN COMPLEX WITH MONOBASIC PHOSPHATE ION Descriptor: DIHYDROGENPHOSPHATE ION, PHOSPHATE-BINDING PROTEIN Authors: Wang, Z, Quiocho, F.A. Deposit date: 1996-10-17 Release date: 1997-10-22 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.89 Å) Cite: A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes. Nat.Struct.Biol., 4, 1997
1IXG	PHOSPHATE-BINDING PROTEIN MUTANT WITH THR 141 REPLACED BY ASP (T141D), COMPLEXED WITH PHOSPATE Descriptor: PHOSPHATE ION, PHOSPHATE-BINDING PROTEIN Authors: Wang, Z, Luecke, H, Quiocho, F.A. Deposit date: 1996-08-01 Release date: 1998-02-04 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.05 Å) Cite: A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes. Nat.Struct.Biol., 4, 1997
1IXH	PHOSPHATE-BINDING PROTEIN (PBP) COMPLEXED WITH PHOSPHATE Descriptor: PHOSPHATE ION, PHOSPHATE-BINDING PROTEIN Authors: Wang, Z, Luecke, H, Quiocho, F.A. Deposit date: 1996-08-01 Release date: 1998-02-04 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (0.98 Å) Cite: A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes. Nat.Struct.Biol., 4, 1997
1BDM	THE STRUCTURE AT 1.8 ANGSTROMS RESOLUTION OF A SINGLE SITE MUTANT (T189I) OF MALATE DEHYDROGENASE FROM THERMUS FLAVUS WITH INCREASED ENZYMATIC ACTIVITY Descriptor: BETA-6-HYDROXY-1,4,5,6-TETRHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MALATE DEHYDROGENASE Authors: Kelly, C.A, Birktoft, J.J. Deposit date: 1993-02-16 Release date: 1994-12-20 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Determinants of protein thermostability observed in the 1.9-A crystal structure of malate dehydrogenase from the thermophilic bacterium Thermus flavus. Biochemistry, 32, 1993
1SFU	Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA Descriptor: 34L protein, 5'-D(*T*CP*GP*CP*GP*CP*G)-3' Authors: Ha, S.C, Van Quyen, D, Wu, C.A, Lowenhaupt, K, Rich, A, Kim, Y.G, Kim, K.K. Deposit date: 2004-02-20 Release date: 2004-08-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA. Proc.Natl.Acad.Sci.USA, 101, 2004
441D	HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC) Descriptor: DNA (5'-D(*AP*GP*GP*GP*GP*CP*CP*CP*CP*T)-3') Authors: Gao, Y.G, Robinson, H.H, Wang, A.H. Deposit date: 1999-01-13 Release date: 1999-01-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.5 Å) Cite: High-resolution A-DNA crystal structures of d(AGGGGCCCCT). An A-DNA model of poly(dG) x poly(dC). Eur.J.Biochem., 261, 1999
1BRN	SUBSITE BINDING IN AN RNASE: STRUCTURE OF A BARNASE-TETRANUCLEOTIDE COMPLEX AT 1.76 ANGSTROMS RESOLUTION Descriptor: DNA (5'-D(*CP*GP*AP*C)-3'), PROTEIN (BARNASE (E.C.3.1.27.-)) Authors: Buckle, A.M, Fersht, A.R. Deposit date: 1993-11-17 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Subsite binding in an RNase: structure of a barnase-tetranucleotide complex at 1.76-A resolution. Biochemistry, 33, 1994
1KXM	Crystal structure of Cytochrome c Peroxidase with a Proposed Electron Transfer Pathway Excised to Form a Ligand Binding Channel. Descriptor: BENZIMIDAZOLE, Cytochrome c Peroxidase, PROTOPORPHYRIN IX CONTAINING FE Authors: Rosenfeld, R.J, Hayes, A.M.A, Musah, R.A, Goodin, D.B. Deposit date: 2002-02-01 Release date: 2002-03-06 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Excision of a proposed electron transfer pathway in cytochrome c peroxidase and its replacement by a ligand-binding channel. Protein Sci., 11, 2002
3F8G	The X-ray structure of a dimeric variant of human pancreatic ribonuclease with high cytotoxic and antitumor activities Descriptor: Ribonuclease pancreatic, SULFATE ION Authors: Merlino, A, Avella, G, Mazzarella, L, Sica, F. Deposit date: 2008-11-12 Release date: 2009-02-10 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural features for the mechanism of antitumor action of a dimeric human pancreatic ribonuclease variant. Protein Sci., 18, 2009
1PUT	AN NMR-DERIVED MODEL FOR THE SOLUTION STRUCTURE OF OXIDIZED PUTIDAREDOXIN, A 2FE, 2-S FERREDOXIN FROM PSEUDOMONAS Descriptor: FE2/S2 (INORGANIC) CLUSTER, PUTIDAREDOXIN Authors: Pochapsky, T.C, Ye, X.M, Ratnaswamy, G, Lyons, T.A. Deposit date: 1994-07-09 Release date: 1994-09-30 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: An NMR-derived model for the solution structure of oxidized putidaredoxin, a 2-Fe, 2-S ferredoxin from Pseudomonas. Biochemistry, 33, 1994
2XNY	A fragment of streptococcal M1 protein in complex with human fibrinogen Descriptor: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ... Authors: Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P. Deposit date: 2010-08-06 Release date: 2011-04-13 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (7.5 Å) Cite: Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network Nature, 472, 2011
2XVN	A. fumigatus chitinase A1 phenyl-methylguanylurea complex Descriptor: 1-METHYL-3-(N-PHENYLCARBAMIMIDOYL)UREA, ASPERGILLUS FUMIGATUS CHITINASE A1, CHLORIDE ION Authors: Rush, C.L, Schuttelkopf, A.W, Hurtado-Guerrero, R, Blair, D.E, Ibrahim, A.F.M, Desvergnes, S, Eggleston, I.M, van Aalten, D.M.F. Deposit date: 2010-10-26 Release date: 2010-11-03 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Natural Product-Guided Discovery of a Fungal Chitinase Inhibitor. Chem.Biol., 17, 2010
1KXN	Crystal Structure of Cytochrome c Peroxidase with a Proposed Electron Transfer Pathway Excised to Form a Ligand Binding Channel. Descriptor: PROTOPORPHYRIN IX CONTAINING FE, cytochrome c peroxidase Authors: Rosenfeld, R.J, Hayes, A.M.A, Musah, R.A, Goodin, D.B. Deposit date: 2002-02-01 Release date: 2002-03-06 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Excision of a proposed electron transfer pathway in cytochrome c peroxidase and its replacement by a ligand-binding channel. Protein Sci., 11, 2002
1XXT	The T-to-T High Transitions in Human Hemoglobin: wild-type deoxy Hb A (low salt, one test set) Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE Authors: Kavanaugh, J.S, Rogers, P.H, Arnone, A. Deposit date: 2004-11-08 Release date: 2004-12-07 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions. Biochemistry, 44, 2005
7DFY	Novel motif for left-handed G-quadruplex formation Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2xMotif2, POTASSIUM ION, ... Authors: Das, P, Winnerdy, F.R, Maity, A, Mechulam, Y, Phan, A.T. Deposit date: 2020-11-10 Release date: 2021-09-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.69 Å) Cite: A novel minimal motif for left-handed G-quadruplex formation. Chem.Commun.(Camb.), 57, 2021
191L	A HELIX INITIATION SIGNAL IN T4 LYSOZYME IDENTIFIED BY POLYALANINE MUTAGENESIS Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME Authors: Zhang, X.-J, Matthews, B.W. Deposit date: 1995-06-13 Release date: 1995-09-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.95 Å) Cite: A helix initiation signal in T4 lysozyme identified by polyalanine mutagenesis. Biophys.Chem., 101-102, 2002
2JYN	A novel solution NMR structure of protein yst0336 from Saccharomyces cerevisiae. Northeast Structural Genomics Consortium target YT51/Ontario Centre for Structural Proteomics target yst0336 Descriptor: UPF0368 protein YPL225W Authors: Wu, B, Yee, A, Fares, C, Lemak, A, Gutmanas, A, Semest, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP) Deposit date: 2007-12-14 Release date: 2007-12-25 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: A novel solution NMR structure of protein yst0336 from Saccharomyces cerevisiae. To be Published
4KC9	Structure of HHARI, a RING-IBR-RING ubiquitin ligase: autoinhibition of an Ariadne-family E3 and insights into ligation mechanism Descriptor: E3 ubiquitin-protein ligase ARIH1, ZINC ION Authors: Duda, D.M, Olszewski, J.L, Schulman, B.A. Deposit date: 2013-04-24 Release date: 2013-05-29 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (3.603 Å) Cite: Structure of HHARI, a RING-IBR-RING Ubiquitin Ligase: Autoinhibition of an Ariadne-Family E3 and Insights into Ligation Mechanism. Structure, 21, 2013
1L35	STRUCTURE OF A THERMOSTABLE DISULFIDE-BRIDGE MUTANT OF PHAGE T4 LYSOZYME SHOWS THAT AN ENGINEERED CROSSLINK IN A FLEXIBLE REGION DOES NOT INCREASE THE RIGIDITY OF THE FOLDED PROTEIN Descriptor: T4 LYSOZYME Authors: Pjura, P.E, Matsumura, M, Wozniak, J.A, Matthews, B.W. Deposit date: 1989-10-26 Release date: 1990-01-15 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of a thermostable disulfide-bridge mutant of phage T4 lysozyme shows that an engineered cross-link in a flexible region does not increase the rigidity of the folded protein. Biochemistry, 29, 1990
1C0Y	SOLUTION STRUCTURE OF THE [AF]-C8-DG ADDUCT POSITIONED OPPOSITE DA AT A TEMPLATE-PRIMER JUNCTION Descriptor: 2-AMINOFLUORENE, DNA (5'-D(*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*GP*GP*TP*AP*GP*C)-3') Authors: Gu, Z, Gorin, A, Hingerty, B.E, Broyde, S, Patel, D.J. Deposit date: 1999-07-19 Release date: 1999-08-31 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structures of aminofluorene [AF]-stacked conformers of the syn [AF]-C8-dG adduct positioned opposite dC or dA at a template-primer junction. Biochemistry, 38, 1999

<106107108109110111112113114115116117118119120121>