PDB: 72678 resultsInfo pagesStatus searchChemie searchBIRD

---

6O3M	Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Hoffer, E.D, Subaramanian, S, Hong, S, Maehigashi, T, Dunham, C.M. Deposit date: 2019-02-26 Release date: 2020-10-14 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3.97 Å) Cite: Structural insights into mRNA reading frame regulation by tRNA modification and slippery codon-anticodon pairing. Elife, 9, 2020
8UU5	Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UU9	Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8G7S	Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Rybak, M.Y, Gagnon, M.G. Deposit date: 2023-02-16 Release date: 2024-03-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
8UU6	Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
6RXV	Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B2 Descriptor: 35S ribosomal RNA, 40S ribosomal protein S1, 40S ribosomal protein S11-like protein, ... Authors: Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E. Deposit date: 2019-06-10 Release date: 2019-08-14 Last modified: 2019-10-02 Method: ELECTRON MICROSCOPY (4 Å) Cite: Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell, 75, 2019
8C8H	Cryo EM structure of the vaccinia complete RNA polymerase complex lacking the capping enzyme Descriptor: Core protein E11, DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, ... Authors: Grimm, G, Bartuli, J, Fischer, U. Deposit date: 2023-01-20 Release date: 2024-01-31 Method: ELECTRON MICROSCOPY (3.84 Å) Cite: Cryo EM structure of the vaccinia complete RNA polymerase complex lacking the capping enzyme To Be Published
1A2P	BARNASE WILDTYPE STRUCTURE AT 1.5 ANGSTROMS RESOLUTION Descriptor: BARNASE, ZINC ION Authors: Martin, C, Richard, V, Salem, M, Hartley, R.W, Mauguen, Y. Deposit date: 1998-01-07 Release date: 1998-04-29 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Refinement and structural analysis of barnase at 1.5 A resolution. Acta Crystallogr.,Sect.D, 55, 1999
8G6W	Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe Descriptor: 16S rRNA, 2-AMINO-BENZAMIDE, 23S rRNA, ... Authors: Majumdar, C, Cate, J.H.D. Deposit date: 2023-02-16 Release date: 2023-04-05 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.02 Å) Cite: Aminobenzoic Acid Derivatives Obstruct Induced Fit in the Catalytic Center of the Ribosome. Acs Cent.Sci., 9, 2023
1BNF	BARNASE T70C/S92C DISULFIDE MUTANT Descriptor: BARNASE Authors: Clarke, J, Henrick, K, Fersht, A.R. Deposit date: 1995-03-31 Release date: 1995-07-10 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Disulfide mutants of barnase. I: Changes in stability and structure assessed by biophysical methods and X-ray crystallography. J.Mol.Biol., 253, 1995
5HR7	X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA Descriptor: 5'-DEOXYADENOSINE, Dual-specificity RNA methyltransferase RlmN, IRON/SULFUR CLUSTER, ... Authors: Schwalm, E.L, Grove, T.L, Booker, S.J, Boal, A.K. Deposit date: 2016-01-22 Release date: 2016-04-13 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystallographic capture of a radical S-adenosylmethionine enzyme in the act of modifying tRNA. Science, 352, 2016
7ZAG	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B. Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... Authors: Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. Deposit date: 2022-03-22 Release date: 2022-08-03 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.77 Å) Cite: Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
6RXZ	Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b Descriptor: 35S ribosomal RNA, 40S ribosomal protein S11-like protein, 40S ribosomal protein S13-like protein, ... Authors: Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E. Deposit date: 2019-06-10 Release date: 2019-08-14 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell, 75, 2019
6RXX	Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state C, Poly-Ala Descriptor: 35S ribosomal RNA, 40S ribosomal protein S1, 40S ribosomal protein S11-like protein, ... Authors: Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E. Deposit date: 2019-06-10 Release date: 2019-08-14 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (7.1 Å) Cite: Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell, 75, 2019
5LMO	Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1B) Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. Deposit date: 2016-08-01 Release date: 2016-10-05 Last modified: 2019-10-02 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation. Cell, 167, 2016
5LMP	Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1C) Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. Deposit date: 2016-08-01 Release date: 2016-10-05 Last modified: 2019-10-02 Method: ELECTRON MICROSCOPY (5.35 Å) Cite: Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation. Cell, 167, 2016
7ZAH	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. Deposit date: 2022-03-22 Release date: 2022-08-03 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
6WNW	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA Descriptor: 16S ribosomal RNA, 23s-5s joint ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Korostelev, A.A, Mankin, A.S, Huang, S, Aleksashin, N.A, Klepacki, D, Reier, K, Kefi, A, Szal, A, Remme, J, Jaeger, L, Vazquez-Laslop, N. Deposit date: 2020-04-23 Release date: 2020-06-24 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly. Nat Commun, 11, 2020
5HR6	X-ray crystal structure of C118A RlmN with cross-linked tRNA purified from Escherichia coli Descriptor: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... Authors: Schwalm, E.L, Grove, T.L, Booker, S.J, Boal, A.K. Deposit date: 2016-01-22 Release date: 2016-04-13 Last modified: 2016-04-27 Method: X-RAY DIFFRACTION (2.88 Å) Cite: Crystallographic capture of a radical S-adenosylmethionine enzyme in the act of modifying tRNA. Science, 352, 2016
6RXT	Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A Descriptor: 35S ribosomal RNA, 40S ribosomal protein S1, 40S ribosomal protein S13-like protein, ... Authors: Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E. Deposit date: 2019-06-10 Release date: 2019-08-14 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (7 Å) Cite: Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell, 75, 2019
6RXY	Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state a Descriptor: 35S rRNA, 40S ribosomal protein S13-like protein, 40S ribosomal protein S14-like protein, ... Authors: Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E. Deposit date: 2019-06-10 Release date: 2019-08-14 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (4.7 Å) Cite: Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell, 75, 2019
7ABZ	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome. Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R. Deposit date: 2020-09-09 Release date: 2021-08-18 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.21 Å) Cite: Structures of tmRNA and SmpB as they transit through the ribosome. Nat Commun, 12, 2021
7ZAI	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A. Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. Deposit date: 2022-03-22 Release date: 2022-07-13 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
6W6V	Structure of yeast RNase MRP holoenzyme Descriptor: RNA component of RNase MRP NME1, RNases MRP/P 32.9 kDa subunit, Ribonuclease MRP protein subunit RMP1, ... Authors: Perederina, A, Li, D, Lee, H, Bator, C, Berezin, I, Hafenstein, S.L, Krasilnikov, A.S. Deposit date: 2020-03-17 Release date: 2020-07-15 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM structure of catalytic ribonucleoprotein complex RNase MRP. Nat Commun, 11, 2020
6Q9A	Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Rae, C.D. Deposit date: 2018-12-17 Release date: 2019-04-17 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: How a circularized tmRNA moves through the ribosome. Science, 363, 2019

<102103104105106107108109110111112113114115116117>