Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1103 件

3F5F
DownloadVisualize
BU of 3f5f by Molmil
Crystal structure of heparan sulfate 2-O-sulfotransferase from gallus gallus as a maltose binding protein fusion.
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Maltose-binding periplasmic protein, Heparan sulfate 2-O-sulfotransferase 1, ...
著者Bethea, H.N, Xu, D, Liu, J, Pedersen, L.C.
登録日2008-11-03
公開日2008-12-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Redirecting the substrate specificity of heparan sulfate 2-O-sulfotransferase by structurally guided mutagenesis.
Proc.Natl.Acad.Sci.USA, 105, 2008
3AMM
DownloadVisualize
BU of 3amm by Molmil
Cellotetraose complex of cellulase 12A from thermotoga maritima
分子名称: Endo-1,4-beta-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Cheng, Y.-S, Ko, T.-P, Liu, J.-R, Guo, R.-T.
登録日2010-08-20
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structure and substrate-binding mode of cellulase 12A from Thermotoga maritima
Proteins, 79, 2011
3AMN
DownloadVisualize
BU of 3amn by Molmil
E134C-Cellobiose complex of cellulase 12A from thermotoga maritima
分子名称: Endo-1,4-beta-glucanase, beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Cheng, Y.-S, Ko, T.-P, Liu, J.-R, Guo, R.-T.
登録日2010-08-20
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal structure and substrate-binding mode of cellulase 12A from Thermotoga maritima
Proteins, 79, 2011
5V9J
DownloadVisualize
BU of 5v9j by Molmil
Crystal structure of catalytic domain of GLP with MS0105
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, Histone-lysine N-methyltransferase EHMT1, ...
著者Dong, A, Zeng, H, Liu, J, Xiong, Y, Babault, N, Jin, J, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Wu, H, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2017-03-23
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of catalytic domain of GLP with MS0105
to be published
3AXE
DownloadVisualize
BU of 3axe by Molmil
The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucanase, CALCIUM ION, ...
著者Huang, J.W, Cheng, Y.S, Ko, T.P, Lin, C.Y, Lai, H.L, Chen, C.C, Ma, Y, Huang, C.H, Zheng, Y, Liu, J.R, Guo, R.T.
登録日2011-04-04
公開日2012-02-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Rational design to improve thermostability and specific activity of the truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase
Appl.Microbiol.Biotechnol., 94, 2012
5VSF
DownloadVisualize
BU of 5vsf by Molmil
Structure of human GLP SET-domain (EHMT1) in complex with inhibitor 17
分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, Histone-lysine N-methyltransferase EHMT1, ...
著者Babault, N, Xiong, Y, Liu, J, Jin, J.
登録日2017-05-11
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-activity relationship studies of G9a-like protein (GLP) inhibitors.
Bioorg. Med. Chem., 25, 2017
5VSD
DownloadVisualize
BU of 5vsd by Molmil
Structure of human GLP SET-domain (EHMT1) in complex with inhibitor 13
分子名称: 1,4-DIETHYLENE DIOXIDE, 6,7-dimethoxy-N~2~-methyl-N~4~-(1-methylpiperidin-4-yl)-N~2~-propylquinazoline-2,4-diamine, GLYCEROL, ...
著者Babault, N, Xiong, Y, Liu, J, Jin, J.
登録日2017-05-11
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-activity relationship studies of G9a-like protein (GLP) inhibitors.
Bioorg. Med. Chem., 25, 2017
3GE9
DownloadVisualize
BU of 3ge9 by Molmil
A Structurally Atypical ThyX from Corynebacterium glutamicum NCHU 87078 Is Not Required for Thymidylate Biosynthesis
分子名称: Thymidylate synthase thyX
著者Wang, W.-C, Liu, J.-S, Chang, C.-M.
登録日2009-02-25
公開日2010-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献A Structurally Atypical ThyX from Corynebacterium glutamicum NCHU 87078 Is Not Required for Thymidylate Biosynthesis
To be Published
5GW8
DownloadVisualize
BU of 5gw8 by Molmil
Crystal structure of a putative DAG-like lipase (MgMDL2) from Malassezia globosa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, ...
著者Xu, J, Xu, H, Liu, J.
登録日2016-09-09
公開日2017-09-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Malassezia globosa MgMDL2 lipase: Crystal structure and rational modification of substrate specificity.
Biochem. Biophys. Res. Commun., 488, 2017
4OD0
DownloadVisualize
BU of 4od0 by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with 1-(1-propanoylpiperidin-4-yl)-3-[4-(trifluoromethoxy)phenyl]urea
分子名称: 1-(1-propanoylpiperidin-4-yl)-3-[4-(trifluoromethoxy)phenyl]urea, Bifunctional epoxide hydrolase 2, MAGNESIUM ION, ...
著者Lee, K.S.S, Liu, J, Wagner, K.M, Pakhomova, S, Dong, H, Morisseau, C, Fu, S.H, Yang, J, Wang, P, Ulu, A, Mate, C, Nguyen, L, Wullf, H, Eldin, M.L, Mara, A.A, Newcomer, M.E, Zeldin, D.C, Hammock, B.D.
登録日2014-01-09
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Optimized inhibitors of soluble epoxide hydrolase improve in vitro target residence time and in vivo efficacy.
J.Med.Chem., 57, 2014
5WE0
DownloadVisualize
BU of 5we0 by Molmil
Structural Basis for Shelterin Bridge Assembly
分子名称: DNA-binding protein rap1, Protection of telomeres protein poz1, Protection of telomeres protein tpz1, ...
著者Kim, J.-K, Liu, J, Hu, X, Yu, C, Roskamp, K, Sankaran, B, Huang, L, Komives, E.-A, Qiao, F.
登録日2017-07-06
公開日2017-12-20
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for Shelterin Bridge Assembly.
Mol. Cell, 68, 2017
5WE2
DownloadVisualize
BU of 5we2 by Molmil
Structural Basis for Telomere Length Regulation by the Shelterin Bridge
分子名称: DNA-binding protein rap1, Protection of telomeres protein poz1, Protection of telomeres protein tpz1, ...
著者Kim, J.-K, Liu, J, Hu, X, Sankaran, B, Qiao, F.
登録日2017-07-06
公開日2017-12-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Shelterin Bridge Assembly.
Mol. Cell, 68, 2017
7WPC
DownloadVisualize
BU of 7wpc by Molmil
The second RBD of SARS-CoV-2 Omicron Variant in complexed with RBD-ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Yin, W, Xu, Y, Xu, P, Cao, X, Wu, C, Gu, C, He, X, Wang, X, Huang, S, Yuan, Q, Wu, K, Hu, W, Huang, Z, Liu, J, Wang, Z, Jia, F, Xia, K, Liu, P, Wang, X, Song, B, Zheng, J, Jiang, H, Cheng, X, Jiang, Y, Deng, S, Xu, E.
登録日2022-01-23
公開日2022-03-09
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Structures of the Omicron spike trimer with ACE2 and an anti-Omicron antibody.
Science, 375, 2022
7WPD
DownloadVisualize
BU of 7wpd by Molmil
SARS-CoV-2 Omicron Variant S Trimer complexed with one JMB2002 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Fab nanobody, ...
著者Yin, W, Xu, Y, Xu, P, Cao, X, Wu, C, Gu, C, He, X, Wang, X, Huang, S, Yuan, Q, Wu, K, Hu, W, Huang, Z, Liu, J, Wang, Z, Jia, F, Xia, K, Liu, P, Wang, X, Song, B, Zheng, J, Jiang, H, Cheng, X, Jiang, Y, Deng, S.J, Xu, H.E.
登録日2022-01-23
公開日2022-03-16
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structures of the Omicron spike trimer with ACE2 and an anti-Omicron antibody.
Science, 375, 2022
7WPF
DownloadVisualize
BU of 7wpf by Molmil
SARS-CoV-2 Omicron Variant S Trimer complexed with three JMB2002 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Fab nanobody, ...
著者Yin, W, Xu, Y, Xu, P, Cao, X, Wu, C, Gu, C, He, X, Wang, X, Huang, S, Yuan, Q, Wu, K, Hu, W, Huang, Z, Liu, J, Wang, Z, Jia, F, Xia, K, Liu, P, Wang, X, Song, B, Zheng, J, Jiang, H, Cheng, X, Jiang, Y, Deng, S.J, Xu, H.E.
登録日2022-01-23
公開日2022-03-16
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structures of the Omicron spike trimer with ACE2 and an anti-Omicron antibody.
Science, 375, 2022
7WPE
DownloadVisualize
BU of 7wpe by Molmil
SARS-CoV-2 Omicron Variant S Trimer complexed with two JMB2002 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Fab nanobody, ...
著者Yin, W, Xu, Y, Xu, P, Cao, X, Wu, C, Gu, C, He, X, Wang, X, Huang, S, Yuan, Q, Wu, K, Hu, W, Huang, Z, Liu, J, Wang, Z, Jia, F, Xia, K, Liu, P, Wang, X, Song, B, Zheng, J, Jiang, H, Cheng, X, Jiang, Y, Deng, S.J, Xu, H.E.
登録日2022-01-23
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Structures of the Omicron spike trimer with ACE2 and an anti-Omicron antibody.
Science, 375, 2022
4OCZ
DownloadVisualize
BU of 4ocz by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with 1-(1-isobutyrylpiperidin-4-yl)-3-(4-(trifluoromethyl)phenyl)urea
分子名称: 1-[1-(2-methylpropanoyl)piperidin-4-yl]-3-[4-(trifluoromethyl)phenyl]urea, Bifunctional epoxide hydrolase 2, MAGNESIUM ION, ...
著者Lee, K.S.S, Liu, J, Wagner, K.M, Pakhomova, S, Dong, H, Morriseau, C, Fu, S.H, Yang, J, Wang, P, Ulu, A, Mate, C, Nguyen, L, Wullf, H, Eldin, M.L, Mara, A.A, Newcomer, M.E, Zeldin, D.C, Hammock, B.D.
登録日2014-01-09
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Optimized inhibitors of soluble epoxide hydrolase improve in vitro target residence time and in vivo efficacy.
J.Med.Chem., 57, 2014
5E8R
DownloadVisualize
BU of 5e8r by Molmil
Human HMT1 hnRNP methyltransferase-like protein 6 (S. cerevisiae)
分子名称: CHLORIDE ION, N-methyl-N-({4-[4-(propan-2-yloxy)phenyl]-1H-pyrrol-3-yl}methyl)ethane-1,2-diamine, Protein arginine N-methyltransferase 6, ...
著者DONG, A, ZENG, H, LIU, J, TEMPEL, W, Seitova, A, Hutchinson, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, JIN, J, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
登録日2015-10-14
公開日2015-12-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A Potent, Selective, and Cell-Active Inhibitor of Human Type I Protein Arginine Methyltransferases.
Acs Chem.Biol., 11, 2016
2JR6
DownloadVisualize
BU of 2jr6 by Molmil
Solution structure of UPF0434 protein NMA0874. Northeast Structural Genomics Target MR32
分子名称: UPF0434 protein NMA0874
著者Ghosh, A, Singarapu, K.K, Wu, Y, Liu, G, Sukumaran, D, Chen, C.X, Nwosu, C, Owens, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2007-06-20
公開日2007-07-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of UPF0434 protein NMA0874.
To be Published
5VSC
DownloadVisualize
BU of 5vsc by Molmil
Structure of human G9a SET-domain (EHMT2) in complex with inhibitor 13
分子名称: 6,7-dimethoxy-N~2~-methyl-N~4~-(1-methylpiperidin-4-yl)-N~2~-propylquinazoline-2,4-diamine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ...
著者Babault, N, Xiong, Y, Liu, J, Jin, J.
登録日2017-05-11
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-activity relationship studies of G9a-like protein (GLP) inhibitors.
Bioorg. Med. Chem., 25, 2017
7YP3
DownloadVisualize
BU of 7yp3 by Molmil
Crystal structure of elaiophylin glycosyltransferase in complex with elaiophylin
分子名称: ACETATE ION, Elaiophylin, GLYCEROL, ...
著者Xu, T, Liu, Q, Gan, Q, Liu, J.
登録日2022-08-02
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate-induced dimerization of elaiophylin glycosyltransferase reveals a novel self-activating form of glycosyltransferase for symmetric glycosylation.
Acta Crystallogr D Struct Biol, 78, 2022
7YP6
DownloadVisualize
BU of 7yp6 by Molmil
Crystal structure of elaiophylin glycosyltransferase in complex with UDP
分子名称: Glycosyltransferase, R-1,2-PROPANEDIOL, URIDINE-5'-DIPHOSPHATE
著者Xu, T, Liu, Q, Gan, Q, Liu, J.
登録日2022-08-02
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Substrate-induced dimerization of elaiophylin glycosyltransferase reveals a novel self-activating form of glycosyltransferase for symmetric glycosylation.
Acta Crystallogr D Struct Biol, 78, 2022
7YP5
DownloadVisualize
BU of 7yp5 by Molmil
Crystal structure of elaiophylin glycosyltransferase in complex with TDP
分子名称: CHLORIDE ION, Glycosyltransferase, R-1,2-PROPANEDIOL, ...
著者Xu, T, Liu, Q, Gan, Q, Liu, J.
登録日2022-08-02
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Substrate-induced dimerization of elaiophylin glycosyltransferase reveals a novel self-activating form of glycosyltransferase for symmetric glycosylation.
Acta Crystallogr D Struct Biol, 78, 2022
7YP4
DownloadVisualize
BU of 7yp4 by Molmil
Crystal structure of elaiophylin glycosyltransferase in apo-form
分子名称: Glycosyltransferase, R-1,2-PROPANEDIOL
著者Xu, T, Liu, Q, Gan, Q, Liu, J.
登録日2022-08-02
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Substrate-induced dimerization of elaiophylin glycosyltransferase reveals a novel self-activating form of glycosyltransferase for symmetric glycosylation.
Acta Crystallogr D Struct Biol, 78, 2022
3DNO
DownloadVisualize
BU of 3dno by Molmil
Molecular structure for the HIV-1 gp120 trimer in the CD4-bound state
分子名称: HIV-1 envelope glycoprotein gp120
著者Borgnia, M.J, Liu, J, Bartesaghi, A, Sapiro, G, Subramaniam, S.
登録日2008-07-02
公開日2008-08-19
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Molecular architecture of native HIV-1 gp120 trimers.
Nature, 455, 2008

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon