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PDB: 639 results

4KDR
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BU of 4kdr by Molmil
Crystal Structure of UBIG/SAH complex
Descriptor: 3-demethylubiquinone-9 3-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Zhu, Y, Teng, M, Li, X.
Deposit date:2013-04-25
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Crystal Structure of the UBIG/SAH complex
To be Published
7F7I
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BU of 7f7i by Molmil
Stapled Peptide Inhibitor in complex with PSD95 GK domain
Descriptor: ACE-ARG-ILE-ARG-ARG-ASP-GLU-TYR-LEU-LYZ-ALA-ILE-GLN-NH2, Disks large homolog 4
Authors:Shang, Y, Huang, X, Li, X, Zhang, M.
Deposit date:2021-06-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Entropy of stapled peptide inhibitors in free state is the major contributor to the improvement of binding affinity with the GK domain.
Rsc Chem Biol, 2, 2021
4IQ8
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BU of 4iq8 by Molmil
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 3 from Saccharomyces cerevisiae
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase 3
Authors:Wang, H, Liu, Q, Niu, L, Teng, M, Li, X.
Deposit date:2013-01-11
Release date:2013-02-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Preliminary crystallographic analysis of glyceraldehyde-3-phosphate dehydrogenase 3 from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 68, 2012
4J1J
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BU of 4j1j by Molmil
Leanyer orthobunyavirus nucleoprotein-ssDNA complex
Descriptor: DNA (5'-D(P*AP*CP*CP*AP*AP*AP*CP*AP*AP*CP*CP*CP*AP*CP*CP*CP*A)-3'), Nucleocapsid
Authors:Niu, F, Shaw, N, Wang, Y, Jiao, L, Ding, W, Li, X, Zhu, P, Upur, H, Ouyang, S, Cheng, G, Liu, Z.J.
Deposit date:2013-02-01
Release date:2013-04-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KUC
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BU of 4kuc by Molmil
Crystal structure of ricin-A chain in complex with the antibody 6C2
Descriptor: Ricin, mAb6c2 fab-Heavy chain, mAb6c2 fab-Light chain
Authors:Zhu, Y, Li, X, Teng, M.
Deposit date:2013-05-21
Release date:2013-07-17
Method:X-RAY DIFFRACTION (2.787 Å)
Cite:Structural insights into the neutralization mechanism of mAb 6C2 against ricin
To be Published
4IFS
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BU of 4ifs by Molmil
Crystal structure of the hSSRP1 Middle domain
Descriptor: CHLORIDE ION, FACT complex subunit SSRP1
Authors:Zhang, W.J, Zeng, F.X, Shao, C, Liu, Y.W, Niu, L.W, Li, X, Teng, M.K.
Deposit date:2012-12-15
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of the hSSRP1 Middle domain
To be Published
8G92
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BU of 8g92 by Molmil
Structure of inhibitor 16d-bound SPNS2
Descriptor: 3-[3-(4-decylphenyl)-1,2,4-oxadiazol-5-yl]propan-1-amine, Sphingosine-1-phosphate transporter SPNS2
Authors:Chen, H, Li, X.
Deposit date:2023-02-21
Release date:2023-05-24
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and functional insights into Spns2-mediated transport of sphingosine-1-phosphate.
Cell, 186, 2023
8WRB
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BU of 8wrb by Molmil
Lysophosphatidylserine receptor GPR34-Gi complex
Descriptor: Antibody fragment scFv16, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Gong, W, Liu, G, Li, X, Wang, Y, Zhang, X.
Deposit date:2023-10-13
Release date:2023-11-08
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural basis for ligand recognition and signaling of the lysophosphatidylserine receptors GPR34 and GPR174.
Plos Biol., 21, 2023
8W51
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BU of 8w51 by Molmil
Structure of YchF(H114A) on E.coli 50S ribosomal subunit
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Yu, T, Li, X, Zeng, F.
Deposit date:2023-08-25
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure basis of translation regulation by YchF bound to ribosome
To Be Published
8G94
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BU of 8g94 by Molmil
Structure of CD69-bound S1PR1 coupled to heterotrimeric Gi
Descriptor: Early activation antigen CD69, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Chen, H, Li, X.
Deposit date:2023-02-21
Release date:2023-04-19
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Transmembrane protein CD69 acts as an S1PR1 agonist.
Elife, 12, 2023
8YC0
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BU of 8yc0 by Molmil
T cell receptor V delta2 V gamma9 in GDN
Descriptor: CHOLESTEROL, T cell receptor delta variable 2,T cell receptor delta constant, T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2024-02-17
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8WYI
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BU of 8wyi by Molmil
T cell receptor delta 2 gamma 9 with TCRD TM domain chimera of TRAC
Descriptor: Signal peptide,flag tag,T cell receptor delta variable 2,T cell receptor delta constant,T cell receptor alpha chain constant,T cell receptor delta variable 2,T cell receptor delta constant,T cell receptor alpha chain constant, Signal peptide,flag tag,T cell receptor gamma variable 9,T cell receptor gamma constant 1,T cell receptor gamma variable 9,T cell receptor gamma constant 1, T-cell surface glycoprotein CD3 delta chain, ...
Authors:Xin, W, Huang, B, Chi, X, Liu, Y, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-10-31
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8WXE
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BU of 8wxe by Molmil
Vgamma5Vdelta1 EH TCR-CD3 complex
Descriptor: CHOLESTEROL, Signal peptide,flag tag,T cell receptor delta variable 1,T cell receptor delta constant, Signal peptide,flag tag,T cell receptor gamma variable 5,T cell receptor gamma constant 1, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-10-28
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8WY0
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BU of 8wy0 by Molmil
T cell receptor delta 2 gamma 9 with F283A, F290A, and F291A
Descriptor: CHOLESTEROL, Signal peptide,flag tag,T cell receptor delta variable 2,T cell receptor delta constant, Signal peptide,flag tag,T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
Authors:Xin, W, Huang, B, Chi, X, Liu, Y, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-10-30
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
7XMX
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BU of 7xmx by Molmil
Cryo-EM structure of SARS-CoV-2 spike glycoprotein in complex with three F61 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, F61 heavy chain, F61 light chain, ...
Authors:Wang, X, Li, X.
Deposit date:2022-04-27
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Structural basis of a two-antibody cocktail exhibiting highly potent and broadly neutralizing activities against SARS-CoV-2 variants including diverse Omicron sublineages.
Cell Discov, 8, 2022
7XMZ
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BU of 7xmz by Molmil
Cryo-EM structure of SARS-CoV-2 spike glycoprotein in complex with three D2 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, D2 heavy chain, D2 light chain, ...
Authors:Wang, X, Li, X.
Deposit date:2022-04-27
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Structural basis of a two-antibody cocktail exhibiting highly potent and broadly neutralizing activities against SARS-CoV-2 variants including diverse Omicron sublineages.
Cell Discov, 8, 2022
8Y6V
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BU of 8y6v by Molmil
Near-atomic structure of icosahedrally averaged jumbo bacteriophage PhiKZ capsid
Descriptor: gp119, gp120, gp162, ...
Authors:Yang, Y, Shao, Q, Guo, M, Han, L, Zhao, X, Wang, A, Li, X, Wang, B, Pan, J, Chen, Z, Fokine, A, Sun, L, Fang, Q.
Deposit date:2024-02-03
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Capsid structure of bacteriophage Phi KZ provides insights into assembly and stabilization of jumbo phages.
Nat Commun, 15, 2024
7XST
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BU of 7xst by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, D2 heavy chain, D2 light chain, ...
Authors:Wang, X, Li, X.
Deposit date:2022-05-15
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural basis of a two-antibody cocktail exhibiting highly potent and broadly neutralizing activities against SARS-CoV-2 variants including diverse Omicron sublineages.
Cell Discov, 8, 2022
8KIE
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BU of 8kie by Molmil
Structure of YchF with 50S ribosomal subunit (local map)
Descriptor: 23S rRNA (partial), 50S ribosomal protein L14, 50S ribosomal protein L19, ...
Authors:Yu, T, Li, X, Zeng, F.
Deposit date:2023-08-23
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structure basis of translation regulation by YchF bound to ribosome
To Be Published
6IZO
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BU of 6izo by Molmil
Crystal structure of DNA polymerase sliding clamp from Caulobacter crescentus
Descriptor: 1,2-ETHANEDIOL, Beta sliding clamp, DI(HYDROXYETHYL)ETHER
Authors:Jiang, X, Zhang, L, Teng, M, Li, X.
Deposit date:2018-12-20
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Caulobacter crescentus beta sliding clamp employs a noncanonical regulatory model of DNA replication.
Febs J., 287, 2020
6JIR
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BU of 6jir by Molmil
Crystal structure of C. crescentus beta sliding clamp with PEG bound to putative beta-motif tethering region
Descriptor: 1,2-ETHANEDIOL, Beta sliding clamp, DI(HYDROXYETHYL)ETHER, ...
Authors:Jiang, X, Teng, M, Li, X.
Deposit date:2019-02-23
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Caulobacter crescentus beta sliding clamp employs a noncanonical regulatory model of DNA replication.
Febs J., 287, 2020
6KJ3
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BU of 6kj3 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.60 A
Descriptor: RNA-binding protein FUS
Authors:Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
Deposit date:2019-07-20
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON CRYSTALLOGRAPHY (0.6 Å)
Cite:Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
6KG7
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BU of 6kg7 by Molmil
Cryo-EM Structure of the Mammalian Tactile Channel Piezo2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Piezo-type mechanosensitive ion channel component 2
Authors:Wang, L, Zhou, H, Zhang, M, Liu, W, Deng, T, Zhao, Q, Li, Y, Lei, J, Li, X, Xiao, B.
Deposit date:2019-07-11
Release date:2019-09-04
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and mechanogating of the mammalian tactile channel PIEZO2.
Nature, 573, 2019
5ZV7
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BU of 5zv7 by Molmil
P domain of GII.17-2014/15 complexed with B-trisaccharide
Descriptor: VP1, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
Authors:Chen, Y, Li, X.
Deposit date:2018-05-09
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
5ZVC
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BU of 5zvc by Molmil
P domain of GII.13 norovirus capsid complexed with Lewis A trisaccharide
Descriptor: GLYCEROL, Major capsid protein VP1, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Chen, Y, Li, X.
Deposit date:2018-05-10
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019

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