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PDB: 73 results

8EAQ
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BU of 8eaq by Molmil
Structure of the full-length IP3R1 channel determined at high Ca2+
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 1, ...
Authors:Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
Deposit date:2022-08-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022
8EAR
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BU of 8ear by Molmil
Structure of the full-length IP3R1 channel determined in the presence of Calcium/IP3/ATP
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
Deposit date:2022-08-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022
3JAV
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BU of 3jav by Molmil
Structure of full-length IP3R1 channel in the apo-state determined by single particle cryo-EM
Descriptor: Inositol 1,4,5-trisphosphate receptor type 1
Authors:Fan, G, Baker, M.L, Wang, Z, Baker, M.R, Sinyagovskiy, P.A, Chiu, W, Ludtke, S.J, Serysheva, I.I.
Deposit date:2015-06-30
Release date:2015-10-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Gating machinery of InsP3R channels revealed by electron cryomicroscopy.
Nature, 527, 2015
7OAE
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BU of 7oae by Molmil
Cryo-EM structure of the plectasin fibril (double strands)
Descriptor: Fungal defensin plectasin
Authors:Effantin, G.
Deposit date:2021-04-19
Release date:2022-04-27
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (2 Å)
Cite:pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils.
Nat Commun, 13, 2022
7OAG
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BU of 7oag by Molmil
Cryo-EM structure of the plectasin fibril (single strand)
Descriptor: Fungal defensin plectasin
Authors:Effantin, G.
Deposit date:2021-04-19
Release date:2022-04-27
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils.
Nat Commun, 13, 2022
7OZ4
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BU of 7oz4 by Molmil
Mature capsid of bacteriophage phiRSA1
Descriptor: p2 family phage major capsid protein
Authors:Effantin, G, Fujiwara, A, Kawsaki, T, Yamada, T, Schoehn, G.
Deposit date:2021-06-25
Release date:2021-11-17
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:High Resolution Structure of the Mature Capsid of Ralstonia solanacearum Bacteriophage phi RSA1 by Cryo-Electron Microscopy.
Int J Mol Sci, 22, 2021
7K78
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BU of 7k78 by Molmil
antibody and nucleosome complex
Descriptor: Cse4, DNA (136-MER), Histone H2A.1, ...
Authors:Ruifang, G, Yawen, B.
Deposit date:2020-09-22
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
7K7G
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BU of 7k7g by Molmil
nucleosome and Gal4 complex
Descriptor: Centromere DNA-binding protein complex CBF3 subunit B, DNA (147-MER), Histone H2A.1, ...
Authors:Ruifang, G, Yawen, B.
Deposit date:2020-09-22
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
6QNT
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BU of 6qnt by Molmil
Human Adenovirus type 3 fiber knob in complex with one copy of Desmoglein-2
Descriptor: Desmoglein-2, Fiber protein
Authors:Effantin, G.
Deposit date:2019-02-12
Release date:2019-03-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CryoEM structure of adenovirus type 3 fibre with desmoglein 2 shows an unusual mode of receptor engagement.
Nat Commun, 10, 2019
6QNU
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BU of 6qnu by Molmil
Human Adenovirus type 3 fiber knob in complex with two copies of Desmoglein-2
Descriptor: Desmoglein-2, Fiber protein
Authors:Effantin, G.
Deposit date:2019-02-12
Release date:2019-03-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:CryoEM structure of adenovirus type 3 fibre with desmoglein 2 shows an unusual mode of receptor engagement.
Nat Commun, 10, 2019
7AGF
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BU of 7agf by Molmil
HAd7 knob in complex with 3 EC2-EC3 modules of DSG-2
Descriptor: Desmoglein-2, Fiber
Authors:Effantin, G, Vassal-Stermann, E, Fender, P.
Deposit date:2020-09-22
Release date:2020-10-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Binding Mechanism Elucidation of the Acute Respiratory Disease Causing Agent Adenovirus of Serotype 7 to Desmoglein-2.
Viruses, 12, 2020
7AGG
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BU of 7agg by Molmil
HAd7 knob in complex with 2 EC2-EC3 modules of DSG-2
Descriptor: Desmoglein-2, Fiber
Authors:Effantin, G, Vassal-Stermann, E, Fender, P.
Deposit date:2020-09-22
Release date:2020-10-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Binding Mechanism Elucidation of the Acute Respiratory Disease Causing Agent Adenovirus of Serotype 7 to Desmoglein-2.
Viruses, 12, 2020
8QK3
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BU of 8qk3 by Molmil
Human Adenovirus type 11 fiber knob in complex with its cell receptors, Desmoglein-2 and CD46
Descriptor: Desmoglein-2, Fiber protein, Membrane cofactor protein
Authors:Effantin, G.
Deposit date:2023-09-14
Release date:2023-11-01
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Toward the understanding of DSG2 and CD46 interaction with HAdV-11 fiber, a super-complex analysis.
J.Virol., 97, 2023
8QJX
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BU of 8qjx by Molmil
Human Adenovirus type 11 fiber knob in complex with two copies of its cell receptor, Desmoglein-2
Descriptor: Desmoglein-2, Fiber protein
Authors:Effantin, G.
Deposit date:2023-09-14
Release date:2023-11-01
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Toward the understanding of DSG2 and CD46 interaction with HAdV-11 fiber, a super-complex analysis.
J.Virol., 97, 2023
8QJY
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BU of 8qjy by Molmil
Human Adenovirus type 11 fiber knob in complex with two copies of its cell receptor, Desmoglein-2
Descriptor: Desmoglein-2, Fiber protein
Authors:Effantin, G.
Deposit date:2023-09-14
Release date:2023-11-01
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Toward the understanding of DSG2 and CD46 interaction with HAdV-11 fiber, a super-complex analysis.
J.Virol., 97, 2023
7K79
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BU of 7k79 by Molmil
CBF3
Descriptor: Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, Suppressor of kinetochore protein 1
Authors:Ruifang, G, Yawen, B.
Deposit date:2020-09-22
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
5NG5
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BU of 5ng5 by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: 6-[2-(3,4-dimethoxyphenyl)ethylsulfanyl]-8-[4-(2-methoxyethyl)piperazin-1-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridine-5-carbonitrile, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, ...
Authors:Wang, Z, Fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-16
Release date:2017-04-19
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
6MU1
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BU of 6mu1 by Molmil
Structure of full-length IP3R1 channel bound with Adenophostin A
Descriptor: Adenophostin A, Inositol 1,4,5-trisphosphate receptor type 1
Authors:Serysheva, I.I, Fan, G, Baker, M.R, Wang, Z, Seryshev, A, Ludtke, S.J, Baker, M.L.
Deposit date:2018-10-22
Release date:2018-12-05
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM reveals ligand induced allostery underlying InsP3R channel gating.
Cell Res., 28, 2018
6MU2
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BU of 6mu2 by Molmil
Structure of full-length IP3R1 channel in the Apo-state
Descriptor: Inositol 1,4,5-trisphosphate receptor type 1
Authors:Serysheva, I.I, Fan, G, Baker, M.R, Wang, Z, Seryshev, A, Ludtke, S.J, Baker, M.L.
Deposit date:2018-10-22
Release date:2018-12-05
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM reveals ligand induced allostery underlying InsP3R channel gating.
Cell Res., 28, 2018
7LHE
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BU of 7lhe by Molmil
Structure of full-length IP3R1 channel reconstituted into lipid nanodisc in the apo-state
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, Inositol 1,4,5-trisphosphate receptor type 1, ZINC ION
Authors:Baker, M.R, Fan, G, Baker, M.L, Serysheva, I.I.
Deposit date:2021-01-22
Release date:2021-06-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of type 1 IP3R channel in a lipid bilayer
Commun Biol, 4, 2021
7LHF
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BU of 7lhf by Molmil
Structure of full-length IP3R1 channel solubilized in LNMG & lipid in the apo-state
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, Inositol 1,4,5-trisphosphate receptor type 1, ZINC ION
Authors:Baker, M.R, Fan, G, Baker, M.L, Serysheva, I.I.
Deposit date:2021-01-22
Release date:2021-06-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Cryo-EM structure of type 1 IP3R channel in a lipid bilayer
Commun Biol, 4, 2021
5V5S
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BU of 5v5s by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC
Authors:wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-15
Release date:2017-04-19
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
6R8N
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BU of 6r8n by Molmil
STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A
Descriptor: Tetrahedral aminopeptidase, ZINC ION
Authors:Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P.
Deposit date:2019-04-02
Release date:2019-08-14
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR
Cite:Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
7ZCH
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BU of 7zch by Molmil
CHMP2A-CHMP3 heterodimer (410 Angstrom diameter)
Descriptor: Charged multivesicular body protein 2a, Charged multivesicular body protein 3
Authors:Azad, K, Desfosses, A, Effantin, G, Schoehn, G, Weissenhorn, W.
Deposit date:2022-03-28
Release date:2023-01-18
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of CHMP2A-CHMP3 ESCRT-III polymer assembly and membrane cleavage.
Nat.Struct.Mol.Biol., 30, 2023
7ZCG
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BU of 7zcg by Molmil
CHMP2A-CHMP3 heterodimer (430 Angstrom diameter)
Descriptor: Charged multivesicular body protein 2a, Charged multivesicular body protein 3
Authors:Azad, K, Desfosses, A, Effantin, G, Schoehn, G, Weissenhorn, W.
Deposit date:2022-03-28
Release date:2023-01-18
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of CHMP2A-CHMP3 ESCRT-III polymer assembly and membrane cleavage.
Nat.Struct.Mol.Biol., 30, 2023

 

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数据于2024-07-17公开中

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