Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 19 results

4F5X
DownloadVisualize
BU of 4f5x by Molmil
Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
Descriptor: Intermediate capsid protein VP6, RNA-directed RNA polymerase, VP2 protein, ...
Authors:Estrozi, L.F, Settembre, E.C, Goret, G, McClain, B, Zhang, X, Chen, J.Z, Grigorieff, N, Harrison, S.C.
Deposit date:2012-05-13
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (5 Å)
Cite:Location of the dsRNA-Dependent Polymerase, VP1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
6ZLV
DownloadVisualize
BU of 6zlv by Molmil
MreC
Descriptor: Rod shape-determining protein MreC
Authors:Estrozi, L.F, Contreras-Martel, C.
Deposit date:2020-07-01
Release date:2021-03-17
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Self-association of MreC as a regulatory signal in bacterial cell wall elongation.
Nat Commun, 12, 2021
2XKV
DownloadVisualize
BU of 2xkv by Molmil
Atomic Model of the SRP-FtsY Early Conformation
Descriptor: 4.5S RNA, CELL DIVISION PROTEIN FTSY, SIGNAL RECOGNITION PARTICLE PROTEIN
Authors:Estrozi, L.F, Boehringer, D, Shan, S.-o, Ban, N, Schaffitzel, C.
Deposit date:2010-07-13
Release date:2010-12-15
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Cryo-Em Structure of the E. Coli Translating Ribosome in Complex with Srp and its Receptor.
Nat.Struct.Mol.Biol., 18, 2011
4AU6
DownloadVisualize
BU of 4au6 by Molmil
Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
Descriptor: RNA-DEPENDENT RNA POLYMERASE
Authors:Estrozi, L.F, Settembre, E.C, Goret, G, McClain, B, Zhang, X, Chen, J.Z, Grigorieff, N, Harrison, S.C.
Deposit date:2012-05-14
Release date:2012-06-13
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Location of the Dsrna-Dependent Polymerase, Vp1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
6R8N
DownloadVisualize
BU of 6r8n by Molmil
STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A
Descriptor: Tetrahedral aminopeptidase, ZINC ION
Authors:Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P.
Deposit date:2019-04-02
Release date:2019-08-14
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR
Cite:Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
7PTV
DownloadVisualize
BU of 7ptv by Molmil
Structure of the Mimivirus genomic fibre asymmetric unit
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative glucose-methanol-choline oxidoreductase protein
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2021-09-27
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30 nm diameter helical protein shield.
Elife, 11, 2022
8PZP
DownloadVisualize
BU of 8pzp by Molmil
Model for influenza A virus helical ribonucleoprotein-like structure
Descriptor: Nucleoprotein, RNA (5'P-(UC)6-FAM3')
Authors:Chenavier, F, Estrozi, L.F, Zarkadas, E, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2023-07-27
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (8.7 Å)
Cite:Cryo-EM structure of influenza helical nucleocapsid reveals NP-NP and NP-RNA interactions as a model for the genome encapsidation.
Sci Adv, 9, 2023
8PZQ
DownloadVisualize
BU of 8pzq by Molmil
Model for focused reconstruction of influenza A RNP-like particle
Descriptor: Nucleoprotein, RNA (5'P-(UC)6-FAM3')
Authors:Chenavier, F, Estrozi, L.F, Zarkadas, E, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2023-07-27
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Cryo-EM structure of influenza helical nucleocapsid reveals NP-NP and NP-RNA interactions as a model for the genome encapsidation.
Sci Adv, 9, 2023
6F3K
DownloadVisualize
BU of 6f3k by Molmil
Combined solid-state NMR, solution-state NMR and EM data for structure determination of the tetrahedral aminopeptidase TET2 from P. horikoshii
Descriptor: Tetrahedral aminopeptidase, ZINC ION
Authors:Gauto, D.F, Estrozi, L.F, Schwieters, C.D, Effantin, G, Macek, P, Sounier, R, Kerfah, R, Sivertsen, A.C, Colletier, J.P, Boisbouvier, J, Schoehn, G, Favier, A, Schanda, P.
Deposit date:2017-11-28
Release date:2018-03-14
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (4.1 Å), SOLID-STATE NMR, SOLUTION NMR
Cite:Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
6I1Y
DownloadVisualize
BU of 6i1y by Molmil
Vibrio vulnificus EpsD
Descriptor: General secretion pathway protein GspD
Authors:Contreras-Martel, C, Farias Estrozi, L.
Deposit date:2018-10-30
Release date:2019-04-10
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system.
Plos Pathog., 15, 2019
6I1X
DownloadVisualize
BU of 6i1x by Molmil
Aeromonas hydrophila ExeD
Descriptor: Type II secretion system protein D
Authors:Contreras-Martel, C, Farias Estrozi, L.
Deposit date:2018-10-30
Release date:2019-04-10
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system.
Plos Pathog., 15, 2019
6I2V
DownloadVisualize
BU of 6i2v by Molmil
Pilotin from Vibrio vulnificus type 2 secretion system, EpsS.
Descriptor: 1,2-ETHANEDIOL, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Howard, S.P, Estrozi, L, Bertrand, Q, Contreras-Martel, C, Strozen, T, Job, V, Martins, A, Fenel, D, Schoehn, G, Dessen, A.
Deposit date:2018-11-02
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system.
Plos Pathog., 15, 2019
7YX3
DownloadVisualize
BU of 7yx3 by Molmil
Structure of the Mimivirus genomic fibre in its compact 6-start helix form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative GMC-type oxidoreductase
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2022-02-15
Release date:2022-08-10
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30-nm diameter helical protein shield.
Elife, 11, 2022
7YX4
DownloadVisualize
BU of 7yx4 by Molmil
Structure of the Mimivirus genomic fibre in its compact 5-start helix form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative glucose-methanol-choline oxidoreductase protein
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2022-02-15
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30 nm diameter helical protein shield.
Elife, 11, 2022
7YX5
DownloadVisualize
BU of 7yx5 by Molmil
Structure of the Mimivirus genomic fibre in its relaxed 5-start helix form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative glucose-methanol-choline oxidoreductase protein
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2022-02-15
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30 nm diameter helical protein shield.
Elife, 11, 2022
6OJ6
DownloadVisualize
BU of 6oj6 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP_RNA)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase, Template, ...
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6OJ3
DownloadVisualize
BU of 6oj3 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6OJ5
DownloadVisualize
BU of 6oj5 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP_RNA)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6OJ4
DownloadVisualize
BU of 6oj4 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon