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PDB: 357 results

6XDG
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Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies
Descriptor: REGN10933 antibody Fab fragment heavy chain, REGN10933 antibody Fab fragment light chain, REGN10987 antibody Fab fragment heavy chain, ...
Authors:Franklin, M.C, Saotome, K, Romero Hernandez, A, Zhou, Y.
Deposit date:2020-06-10
Release date:2020-06-24
Last modified:2021-01-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Studies in humanized mice and convalescent humans yield a SARS-CoV-2 antibody cocktail.
Science, 369, 2020
1C1J
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BU of 1c1j by Molmil
STRUCTURE OF CADMIUM-SUBSTITUTED PHOSPHOLIPASE A2 FROM AGKISTRONDON HALYS PALLAS AT 2.8 ANGSTROMS RESOLUTION
Descriptor: BASIC PHOSPHOLIPASE A2, CADMIUM ION, octyl beta-D-glucopyranoside
Authors:Zhang, H.-l, Zhang, Y.-q, Song, S.-y, Zhou, Y, Lin, Z.-j.
Deposit date:1999-07-22
Release date:2002-07-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Cadmium-substituted Phospholipase A2 from Agkistrodon halys Pallas at 2.8 Angstroms Resolution
Protein Pept.Lett., 6, 1999
1M8S
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BU of 1m8s by Molmil
Crystal Structures of Cadmium-binding Acidic Phospholipase A2 from the Venom of Agkistrodon halys pallas at 1.9 Resolution (crystal grown at pH 5.9)
Descriptor: 1,4-BUTANEDIOL, CADMIUM ION, phospholipase a2
Authors:Xu, S, Gu, L, Zhou, Y, Lin, Z.
Deposit date:2002-07-25
Release date:2003-02-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of cadmium-binding acidic phospholipase A(2) from the venom of Agkistrodon halys Pallas at 1.9A resolutio
Biochem.Biophys.Res.Commun., 300, 2003
3OOP
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BU of 3oop by Molmil
The structure of a protein with unknown function from Listeria innocua Clip11262
Descriptor: Lin2960 protein
Authors:Fan, Y, Li, H, Zhou, Y, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-09-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The structure of a protein with unknown function from Listeria innocua Clip11262
To be Published
1KGS
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BU of 1kgs by Molmil
Crystal Structure at 1.50 A of an OmpR/PhoB Homolog from Thermotoga maritima
Descriptor: DNA BINDING RESPONSE REGULATOR D, THIOCYANATE ION
Authors:Buckler, D.R, Zhou, Y, Stock, A.M.
Deposit date:2001-11-28
Release date:2001-12-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima.
Structure, 10, 2002
2AY0
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BU of 2ay0 by Molmil
Structure of the Lys9Met mutant of the E. coli Proline Utilization A (PutA) DNA-binding domain.
Descriptor: Bifunctional putA protein, CHLORIDE ION
Authors:Larson, J.D, Schuermann, J.P, Zhou, Y, Jenkins, J.L, Becker, D.F, Tanner, J.J.
Deposit date:2005-09-06
Release date:2006-08-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the DNA-binding domain of Escherichia coli proline utilization A flavoprotein and analysis of the role of Lys9 in DNA recognition.
Protein Sci., 15, 2006
8UQQ
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BU of 8uqq by Molmil
Structure of mCLIFY: a circularly permuted yellow fluorescent protein
Descriptor: mCLIFY
Authors:Shweta, H, Gupta, K, Zhou, Y, Cui, X, Li, S, Lu, Z, Goldman, Y.E, Dantzig, J.
Deposit date:2023-10-24
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure of mCLIFY: a circularly permuted yellow fluorescent protein
To Be Published
1JVM
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BU of 1jvm by Molmil
KCSA POTASSIUM CHANNEL WITH TBA (TETRABUTYLAMMONIUM) AND RUBIDIUM
Descriptor: RUBIDIUM ION, TETRABUTYLAMMONIUM ION, Voltage-gated potassium channel
Authors:Morais-Cabral, J.H, Zhou, Y, MacKinnon, R.
Deposit date:2001-08-30
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Energetic optimization of ion conduction rate by the K+ selectivity filter.
Nature, 414, 2001
8XEP
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BU of 8xep by Molmil
Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin
Descriptor: SULFATE ION, Type IV effector MavL, Ubiquitin
Authors:Tan, J.X, Wang, X.F, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-12-12
Release date:2024-05-01
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Legionella effector LnaB is a phosphoryl AMPylase that impairs phosphosignalling.
Nature, 631, 2024
3W4R
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BU of 3w4r by Molmil
Crystal structure of an insect chitinase from the Asian corn borer, Ostrinia furnacalis
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase
Authors:Chen, L, Liu, T, Zhou, Y, Shen, X, Yang, Q.
Deposit date:2013-01-10
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural characteristics of an insect group I chitinase, an enzyme indispensable to moulting
Acta Crystallogr.,Sect.D, 70, 2014
3WL0
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Crystal structure of Ostrinia furnacalis Group I chitinase catalytic domain E148A mutant in complex with a(GlcNAc)2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase
Authors:Chen, L, Liu, T, Zhou, Y, Chen, Q, Shen, X, Yang, Q.
Deposit date:2013-11-05
Release date:2014-04-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Structural characteristics of an insect group I chitinase, an enzyme indispensable to moulting.
Acta Crystallogr.,Sect.D, 70, 2014
3WKZ
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BU of 3wkz by Molmil
Crystal Structure of the Ostrinia furnacalis Group I Chitinase catalytic domain E148Q mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase
Authors:Chen, L, Liu, T, Zhou, Y, Chen, Q, Shen, X, Yang, Q.
Deposit date:2013-11-05
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural characteristics of an insect group I chitinase, an enzyme indispensable to moulting.
Acta Crystallogr.,Sect.D, 70, 2014
3WL1
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BU of 3wl1 by Molmil
Crystal structure of Ostrinia furnacalis Group I chitinase catalytic domain in complex with reaction products (GlcNAc)2,3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, L, Liu, T, Zhou, Y, Chen, Q, Shen, X, Yang, Q.
Deposit date:2013-11-05
Release date:2014-04-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.772 Å)
Cite:Structural characteristics of an insect group I chitinase, an enzyme indispensable to moulting.
Acta Crystallogr.,Sect.D, 70, 2014
3X21
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BU of 3x21 by Molmil
Crystal structure of Escherichia coli nitroreductase NfsB mutant T41L/N71S/F124W
Descriptor: FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Bai, J, Yang, J, Zhou, Y, Yang, Q.
Deposit date:2014-12-06
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Altering the regioselectivity of a nitroreductase in the synthesis of arylhydroxylamines by structure-based engineering.
Chembiochem, 16, 2015
3X22
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BU of 3x22 by Molmil
Crystal structure of Escherichia coli nitroreductase NfsB mutant N71S/F123A/F124W
Descriptor: FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Bai, J, Yang, J, Zhou, Y, Yang, Q.
Deposit date:2014-12-06
Release date:2015-11-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis of Escherichia coli nitroreductase NfsB triple mutants engineered for improved activity and regioselectivity toward the prodrug CB1954
PROCESS BIOCHEM, 50, 2015
2DGN
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BU of 2dgn by Molmil
Mouse Muscle Adenylosuccinate Synthetase partially ligated complex with GTP, 2'-deoxy-IMP
Descriptor: 9-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-6-(PHOSPHONOOXY)-9H-PURINE, Adenylosuccinate synthetase isozyme 1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Iancu, C.V, Zhou, Y, Borza, T, Fromm, H.J, Honzatko, R.B.
Deposit date:2006-03-15
Release date:2006-09-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cavitation as a mechanism of substrate discrimination by adenylosuccinate synthetases.
Biochemistry, 45, 2006
3VTR
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BU of 3vtr by Molmil
Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 E328A complexed with TMG-chitotriomycin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-(trimethylammonio)-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylglucosaminidase
Authors:Liu, T, Zhou, Y, Chen, L, Chen, W, Liu, L, Shen, X, Yang, Q.
Deposit date:2012-06-02
Release date:2013-01-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into cellulolytic and chitinolytic enzymes revealing crucial residues of insect beta-N-acetyl-D-hexosaminidase
Plos One, 7, 2012
2J6P
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BU of 2j6p by Molmil
STRUCTURE OF AS-SB REDUCTASE FROM LEISHMANIA MAJOR
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, SB(V)-AS(V) REDUCTASE, ...
Authors:Bisacchi, D, Zhou, Y, Rosen, B.P, Mukhopadhyay, R, Bordo, D.
Deposit date:2006-10-02
Release date:2007-10-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural characterization of the As/Sb reductase LmACR2 from Leishmania major.
J. Mol. Biol., 386, 2009
2GIZ
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BU of 2giz by Molmil
Structural and functional analysis of Natrin, a member of crisp-3 family blocks a variety of ion channels
Descriptor: Natrin-1
Authors:Jiang, T, Wang, F, Li, H, Yin, C, Zhou, Y, Shu, Y, Qi, Z, Lin, Z.
Deposit date:2006-03-30
Release date:2006-11-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural and functional analysis of natrin, a venom protein that targets various ion channels
Biochem.Biophys.Res.Commun., 351, 2006
3WZF
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BU of 3wzf by Molmil
Crystal structure of human cytoplasmic aspartate aminotransferase
Descriptor: Aspartate aminotransferase, cytoplasmic
Authors:Jiang, X, Chang, H, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2014-09-24
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.991 Å)
Cite:Recombinant expression, purification and Preliminary crystallographic studies of human cytoplasmic aspartate aminotransferase
To be Published
6PDX
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BU of 6pdx by Molmil
Crystal structure of C585 Fab in complex with influenza virus hemagglutinin from A/Switzerland/9715293/2013 (H3N2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C585 Fab heavy chain, ...
Authors:Qiu, Y, Zhou, Y.
Deposit date:2019-06-19
Release date:2019-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.993 Å)
Cite:Mapping of a Novel H3-Specific Broadly Neutralizing Monoclonal Antibody Targeting the Hemagglutinin Globular Head Isolated from an Elite Influenza Virus-Immunized Donor Exhibiting Serological Breadth.
J.Virol., 94, 2020
3WMC
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BU of 3wmc by Molmil
Crystal structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with naphthalimide derivative Q2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-(dimethylamino)-2-(2-{[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]amino}ethyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione, Beta-hexosaminidase
Authors:Chen, L, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2013-11-16
Release date:2014-11-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:A crystal structure-guided rational design switching non-carbohydrate inhibitors' specificity between two beta-GlcNAcase homologs
Sci Rep, 4, 2014
3WMB
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BU of 3wmb by Molmil
Crystal structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with naphthalimide derivative Q1
Descriptor: 2-(2-{[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]amino}ethyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase
Authors:Liu, T, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2013-11-16
Release date:2014-11-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A crystal structure-guided rational design switching non-carbohydrate inhibitors' specificity between two beta-GlcNAcase homologs
Sci Rep, 4, 2014
5GQB
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BU of 5gqb by Molmil
Crystal structure of chitinase-h from O. furnacalis in complex with chitohepatose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, T, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2016-08-06
Release date:2017-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure, Catalysis, and Inhibition of OfChi-h, the Lepidoptera-exclusive Insect Chitinase.
J. Biol. Chem., 292, 2017
5GPR
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BU of 5gpr by Molmil
Crystal structure of chitinase-h from Ostrinia furnacalis
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase
Authors:Liu, T, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2016-08-04
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Structure, Catalysis, and Inhibition of OfChi-h, the Lepidoptera-exclusive Insect Chitinase.
J. Biol. Chem., 292, 2017

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