5LIZ
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![BU of 5liz by Molmil](/molmil-images/mine/5liz) | The structure of Nt.BspD6I nicking endonuclease with all cysteines mutated by serine residues at 0.19 nm resolution . | Descriptor: | Nicking endonuclease N.BspD6I, PHOSPHATE ION | Authors: | Kachalova, G.S, Artyukh, R.I, Perevyazova, T.A, Yunusova, A.K, Popov, A.N, Bartunik, H.D, Zheleznaya, L.A. | Deposit date: | 2016-07-16 | Release date: | 2017-08-02 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.93 Å) | Cite: | Structural features of Cysteine residues mutation of the nicking endonuclease Nt.BspD6I. To Be Published
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4B2D
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![BU of 4b2d by Molmil](/molmil-images/mine/4b2d) | human PKM2 with L-serine and FBP bound. | Descriptor: | 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, PYRUVATE KINASE ISOZYMES M1/M2, ... | Authors: | Chaneton, B, Hillmann, P, Zheng, L, Martin, A.C.L, Maddocks, O.D.K, Chokkathukalam, A, Coyle, J.E, Jankevics, A, Holding, F.P, Vousden, K.H, Frezza, C, O'Reilly, M, Gottlieb, E. | Deposit date: | 2012-07-13 | Release date: | 2012-10-10 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Serine is a natural ligand and allosteric activator of pyruvate kinase M2. Nature, 491, 2012
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2BBR
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![BU of 2bbr by Molmil](/molmil-images/mine/2bbr) | Crystal Structure of MC159 Reveals Molecular Mechanism of DISC Assembly and vFLIP Inhibition | Descriptor: | AZIDE ION, Viral CASP8 and FADD-like apoptosis regulator | Authors: | Yang, J.K, Wang, L, Zheng, L, Wan, F, Ahmed, M, Lenardo, M.J, Wu, H. | Deposit date: | 2005-10-17 | Release date: | 2006-02-14 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Crystal structure of MC159 reveals molecular mechanism of DISC assembly and FLIP inhibition. Mol.Cell, 20, 2005
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2BBZ
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![BU of 2bbz by Molmil](/molmil-images/mine/2bbz) | Crystal Structure of MC159 Reveals Molecular Mechanism of DISC Assembly and vFLIP Inhibition | Descriptor: | Viral CASP8 and FADD-like apoptosis regulator | Authors: | Yang, J.K, Wang, L, Zheng, L, Wan, F, Ahmed, M, Lenardo, M.J, Wu, H. | Deposit date: | 2005-10-18 | Release date: | 2006-02-14 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3.8 Å) | Cite: | Crystal structure of MC159 reveals molecular mechanism of DISC assembly and FLIP inhibition. Mol.Cell, 20, 2005
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2EWF
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![BU of 2ewf by Molmil](/molmil-images/mine/2ewf) | Crystal structure of the site-specific DNA nickase N.BspD6I | Descriptor: | BROMIDE ION, Nicking endonuclease N.BspD6I | Authors: | Kachalova, G.S, Bartunik, H.D, Artyukh, R.I, Rogulin, E.A, Perevyazova, T.A, Zheleznaya, L.A, Matvienko, N.I. | Deposit date: | 2005-11-03 | Release date: | 2006-11-21 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Structural analysis of the heterodimeric type IIS restriction endonuclease R.BspD6I acting as a complex between a monomeric site-specific nickase and a catalytic subunit. J.Mol.Biol., 384, 2008
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5DAY
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![BU of 5day by Molmil](/molmil-images/mine/5day) | The structure of NAP1-Related Protein(NRP1) in Arabidopsis | Descriptor: | CALCIUM ION, NAP1-related protein 1 | Authors: | Zhu, Y, Rong, L, Yang, Y, Zhang, C, Feng, H.Y, Zheng, L.N, Shen, W.H, Ma, J.B, Dong, A.W. | Deposit date: | 2015-08-20 | Release date: | 2016-09-21 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.329 Å) | Cite: | The structure of NAP1-Related Protein(NRP1) in Arabidopsis To Be Published
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3HCS
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![BU of 3hcs by Molmil](/molmil-images/mine/3hcs) | Crystal structure of the N-terminal domain of TRAF6 | Descriptor: | TNF receptor-associated factor 6, ZINC ION | Authors: | Yin, Q, Lin, S.-C, Lamothe, B, Lu, M, Lo, Y.-C, Hura, G, Zheng, L, Rich, R.L, Campos, A.D, Myszka, D.G, Lenardo, M.J, Darnay, B.G, Wu, H. | Deposit date: | 2009-05-06 | Release date: | 2009-05-26 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | E2 interaction and dimerization in the crystal structure of TRAF6. Nat.Struct.Mol.Biol., 16, 2009
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3HCU
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![BU of 3hcu by Molmil](/molmil-images/mine/3hcu) | Crystal structure of TRAF6 in complex with Ubc13 in the C2 space group | Descriptor: | TNF receptor-associated factor 6, Ubiquitin-conjugating enzyme E2 N, ZINC ION | Authors: | Yin, Q, Lin, S.-C, Lamothe, B, Lu, M, Lo, Y.-C, Hura, G, Zheng, L, Rich, R.L, Campos, A.D, Myszka, D.G, Lenardo, M.J, Darnay, B.G, Wu, H. | Deposit date: | 2009-05-06 | Release date: | 2009-05-26 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | E2 interaction and dimerization in the crystal structure of TRAF6. Nat.Struct.Mol.Biol., 16, 2009
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3RB5
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![BU of 3rb5 by Molmil](/molmil-images/mine/3rb5) | Crystal structure of calcium binding domain CBD12 of CALX1.1 | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Na/Ca exchange protein, ... | Authors: | Wu, M, Zheng, L. | Deposit date: | 2011-03-28 | Release date: | 2011-11-02 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Structural Basis of the Ca(2+) Inhibitory Mechanism of Drosophila Na(+)/Ca(2+) Exchanger CALX and Its Modification by Alternative Splicing. Structure, 19, 2011
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3E9T
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![BU of 3e9t by Molmil](/molmil-images/mine/3e9t) | Crystal structure of Apo-form Calx CBD1 domain | Descriptor: | CALCIUM ION, Na/Ca exchange protein | Authors: | Wu, M, Zheng, L. | Deposit date: | 2008-08-23 | Release date: | 2009-09-01 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal structures of progressive Ca2+ binding states of the Ca2+ sensor Ca2+ binding domain 1 (CBD1) from the CALX Na+/Ca2+ exchanger reveal incremental conformational transitions. J.Biol.Chem., 285, 2010
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3EB1
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![BU of 3eb1 by Molmil](/molmil-images/mine/3eb1) | Crystal structure PTP1B complex with small molecule inhibitor LZP-25 | Descriptor: | 4-[3-(dibenzylamino)phenyl]-2,4-dioxobutanoic acid, Tyrosine-protein phosphatase non-receptor type 1 | Authors: | Liu, S, Zheng, L.-F, Wu, L, Yu, X, Xue, T, Gunawan, A.M, Long, Y.-Q, Zhang, Z.-Y. | Deposit date: | 2008-08-26 | Release date: | 2009-07-07 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Targeting inactive enzyme conformation: aryl diketoacid derivatives as a new class of PTP1B inhibitors. J.Am.Chem.Soc., 130, 2008
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6PW7
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![BU of 6pw7 by Molmil](/molmil-images/mine/6pw7) | X-ray crystal structure of C. elegans STIM EF-SAM domain | Descriptor: | CALCIUM ION, Stromal interaction molecule 1 | Authors: | Enomoto, M, Nishikawa, T, Back, S.I, Ishiyama, N, Zheng, L, Stathopulos, P.B, Ikura, M. | Deposit date: | 2019-07-22 | Release date: | 2019-11-13 | Last modified: | 2020-02-12 | Method: | X-RAY DIFFRACTION (1.89 Å) | Cite: | Coordination of a Single Calcium Ion in the EF-hand Maintains the Off State of the Stromal Interaction Molecule Luminal Domain. J.Mol.Biol., 432, 2020
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6QNZ
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![BU of 6qnz by Molmil](/molmil-images/mine/6qnz) | Crystal structure of the site-specific DNA nickase N.BspD6I E418A Mutant | Descriptor: | GLYCEROL, Heterodimeric restriction endonuclease R.BspD6I large subunit, PHOSPHATE ION | Authors: | Artyukh, R.I, Kachalova, G.S, Yunusova, A.K, Gabdulkhakov, A.G, Fatkhullin, B.F, Atanasov, B.P, Perevyazova, T.A, Popov, A.N, Zheleznaya, L.A. | Deposit date: | 2019-02-12 | Release date: | 2020-03-04 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | The key role of E418 carboxyl group in the formation of Nt.BspD6I nickase active site: Structural and functional properties of Nt.BspD6I E418A mutant. J.Struct.Biol., 210, 2020
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3RB7
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![BU of 3rb7 by Molmil](/molmil-images/mine/3rb7) | Crystal structure of CBD12 from CALX1.2 | Descriptor: | CALCIUM ION, Na/Ca exchange protein, SULFATE ION | Authors: | Wu, M, Zheng, L. | Deposit date: | 2011-03-28 | Release date: | 2011-11-02 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural Basis of the Ca(2+) Inhibitory Mechanism of Drosophila Na(+)/Ca(2+) Exchanger CALX and Its Modification by Alternative Splicing. Structure, 19, 2011
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3H4J
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![BU of 3h4j by Molmil](/molmil-images/mine/3h4j) | crystal structure of pombe AMPK KDAID fragment | Descriptor: | SNF1-like protein kinase ssp2 | Authors: | Chen, L, Jiao, Z.-H, Zheng, L.-S, Zhang, Y.-Y, Xie, S.-T, Wang, Z.-X, Wu, J.-W. | Deposit date: | 2009-04-20 | Release date: | 2009-06-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Structural insight into the autoinhibition mechanism of AMP-activated protein kinase Nature, 459, 2009
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3HCT
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![BU of 3hct by Molmil](/molmil-images/mine/3hct) | Crystal structure of TRAF6 in complex with Ubc13 in the P1 space group | Descriptor: | TNF receptor-associated factor 6, Ubiquitin-conjugating enzyme E2 N, ZINC ION | Authors: | Yin, Q, Lin, S.-C, Lamothe, B, Lu, M, Lo, Y.-C, Hura, G, Zheng, L, Rich, R.L, Campos, A.D, Myszka, D.G, Lenardo, M.J, Darnay, B.G, Wu, H. | Deposit date: | 2009-05-06 | Release date: | 2009-05-26 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | E2 interaction and dimerization in the crystal structure of TRAF6. Nat.Struct.Mol.Biol., 16, 2009
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3E9U
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![BU of 3e9u by Molmil](/molmil-images/mine/3e9u) | Crystal structure of Calx CBD2 domain | Descriptor: | Na/Ca exchange protein | Authors: | Wu, M, Zheng, L. | Deposit date: | 2008-08-23 | Release date: | 2009-01-27 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of CBD2 from the Drosophila Na(+)/Ca(2+) exchanger: diversity of Ca(2+) regulation and its alternative splicing modification. J.Mol.Biol., 387, 2009
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5XYU
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![BU of 5xyu by Molmil](/molmil-images/mine/5xyu) | Small subunit of Mycobacterium smegmatis ribosome | Descriptor: | 16S RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | Authors: | Li, Z, Zhang, Y, Zheng, L, Ge, X, Sanyal, S, Gao, N. | Deposit date: | 2017-07-10 | Release date: | 2017-09-27 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.45 Å) | Cite: | Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers. Protein Cell, 9, 2018
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5XY3
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![BU of 5xy3 by Molmil](/molmil-images/mine/5xy3) | Large subunit of Trichomonas vaginalis ribosome | Descriptor: | 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... | Authors: | Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. | Deposit date: | 2017-07-06 | Release date: | 2017-08-30 | Last modified: | 2019-12-18 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
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3T7D
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![BU of 3t7d by Molmil](/molmil-images/mine/3t7d) | Vall from streptomyces hygroscopicus in complex with trehalose | Descriptor: | IMIDAZOLE, MAGNESIUM ION, Putative glycosyltransferase, ... | Authors: | Zhang, H, Zheng, L, Qian, H, Chen, J. | Deposit date: | 2011-07-29 | Release date: | 2012-08-01 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural basis for the substrate specificity of ValL To be Published
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5XYM
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![BU of 5xym by Molmil](/molmil-images/mine/5xym) | Large subunit of Mycobacterium smegmatis | Descriptor: | 23S RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... | Authors: | Li, Z, Ge, X, Zhang, Y, Zheng, L, Sanyal, S, Gao, N. | Deposit date: | 2017-07-09 | Release date: | 2017-09-27 | Last modified: | 2018-04-11 | Method: | ELECTRON MICROSCOPY (3.08 Å) | Cite: | Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers. Protein Cell, 9, 2018
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5XYI
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![BU of 5xyi by Molmil](/molmil-images/mine/5xyi) | Small subunit of Trichomonas vaginalis ribosome | Descriptor: | 18S, 40S ribosomal protein S13, putative, ... | Authors: | Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. | Deposit date: | 2017-07-08 | Release date: | 2017-08-30 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.35 Å) | Cite: | Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
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5XXU
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![BU of 5xxu by Molmil](/molmil-images/mine/5xxu) | Small subunit of Toxoplasma gondii ribosome | Descriptor: | 18S RNA, Ribosomal protein eL41, Ribosomal protein eS1, ... | Authors: | LI, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. | Deposit date: | 2017-07-05 | Release date: | 2017-08-30 | Last modified: | 2018-10-24 | Method: | ELECTRON MICROSCOPY (3.35 Å) | Cite: | Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
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6JXR
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![BU of 6jxr by Molmil](/molmil-images/mine/6jxr) | Structure of human T cell receptor-CD3 complex | Descriptor: | T cell receptor alpha variable 12-3,Possible J 11 gene segment,T cell receptor alpha constant, T cell receptor beta variable 6-5,M1-specific T cell receptor beta chain,T cell receptor beta constant 2, T-cell surface glycoprotein CD3 delta chain, ... | Authors: | Dong, D, Zheng, L, Lin, J, Zhu, Y, Li, N, Zhang, B, Xie, S, Zheng, J, Wang, Y, Gao, N, Huang, Z. | Deposit date: | 2019-04-24 | Release date: | 2019-09-11 | Last modified: | 2020-09-16 | Method: | ELECTRON MICROSCOPY (3.7 Å) | Cite: | Structural basis of assembly of the human T cell receptor-CD3 complex. Nature, 573, 2019
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5JWY
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![BU of 5jwy by Molmil](/molmil-images/mine/5jwy) | Structure of lipid phosphate phosphatase PgpB complex with PE | Descriptor: | (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, Phosphatidylglycerophosphatase B | Authors: | Tong, S, Wang, M, Zheng, L. | Deposit date: | 2016-05-12 | Release date: | 2016-07-20 | Last modified: | 2019-11-27 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Structural Insight into Substrate Selection and Catalysis of Lipid Phosphate Phosphatase PgpB in the Cell Membrane. J.Biol.Chem., 291, 2016
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