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PDB: 537 results

3GG4
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BU of 3gg4 by Molmil
The crystal structure of glycerol kinase from Yersinia pseudotuberculosis
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, glycerol kinase
Authors:Zhang, Z, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-27
Release date:2009-03-31
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of glycerol kinase from Yersinia pseudotuberculosis
To be Published
3G0C
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BU of 3g0c by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-(2-chlorobenzyl)-1,3-dimethyl-8-piperazin-1-yl-3,7-dihydro-1H-purine-2,6-dione, ...
Authors:Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
Deposit date:2009-01-27
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3G0B
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BU of 3g0b by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with TAK-322
Descriptor: 2-({6-[(3R)-3-aminopiperidin-1-yl]-3-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl}methyl)benzonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
Deposit date:2009-01-27
Release date:2010-02-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3HDC
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BU of 3hdc by Molmil
The crystal structure of thioredoxin protein from Geobacter metallireducens
Descriptor: Thioredoxin family protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-05-07
Release date:2009-05-26
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.771 Å)
Cite:The crystal structure of thioredoxin protein from Geobacter metallireducens
To be Published
3G0G
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BU of 3g0g by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinone inhibitor 3
Descriptor: 2-({2-[(3R)-3-aminopiperidin-1-yl]-5-bromo-6-oxopyrimidin-1(6H)-yl}methyl)benzonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
Deposit date:2009-01-27
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3G1W
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BU of 3g1w by Molmil
Crystal structure of sugar ABC transporter (sugar-binding protein) from Bacillus halodurans
Descriptor: Sugar ABC transporter
Authors:Zhang, Z, Eswaramoorthy, S, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-01-30
Release date:2009-02-17
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The crystal structure of sugar ABC transporter (sugar-binding protein) from Bacillus halodurans.
To be Published
3H6E
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BU of 3h6e by Molmil
The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans
Descriptor: Carbohydrate kinase, FGGY
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-23
Release date:2009-06-02
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of carbohydrate kinase from Novosphingobium aromaticivorans
To be Published
3HZ6
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BU of 3hz6 by Molmil
Crystal structure of xylulokinase from Chromobacterium violaceum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-XYLULOSE, GLYCEROL, ...
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-23
Release date:2009-07-21
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of xylulokinase from Chromobacterium violaceum
To be Published
3GBT
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BU of 3gbt by Molmil
Crystal structure of gluconate kinase from Lactobacillus acidophilus
Descriptor: Gluconate kinase
Authors:Zhang, Z, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-20
Release date:2009-03-10
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of gluconate kinase from Lactobacillus acidophilus
To be Published
3I8B
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BU of 3i8b by Molmil
The crystal structure of xylulose kinase from Bifidobacterium adolescentis
Descriptor: MAGNESIUM ION, Xylulose kinase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-09
Release date:2009-08-04
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of xylulose kinase from Bifidobacterium adolescentis
To be Published
3GV1
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BU of 3gv1 by Molmil
Crystal structure of disulfide interchange protein from Neisseria gonorrhoeae
Descriptor: BENZOIC ACID, Disulfide interchange protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-30
Release date:2009-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of disulfide interchange protein from Neisseria gonorrhoeae
To be Published
3IFR
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BU of 3ifr by Molmil
The crystal structure of xylulose kinase from Rhodospirillum rubrum
Descriptor: Carbohydrate kinase, FGGY, PHOSPHATE ION
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-24
Release date:2009-08-25
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of xylulose kinase from Rhodospirillum rubrum
To be Published
3H5O
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BU of 3h5o by Molmil
The crystal structure of transcription regulator GntR from Chromobacterium violaceum
Descriptor: SULFATE ION, Transcriptional regulator GntR
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-22
Release date:2009-05-05
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of transcription regulator GntR from Chromobacterium violaceum
To be Published
3JBQ
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BU of 3jbq by Molmil
Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6
Descriptor: GafA domain of cone phosphodiesterase 6C, GafB domain of phosphodiesterase 2A, IgG1-kappa 2E8 heavy chain, ...
Authors:Zhang, Z, He, F, Constantine, R, Baker, M.L, Baehr, W, Schmid, M.F, Wensel, T.G, Agosto, M.A.
Deposit date:2015-09-17
Release date:2015-09-30
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6.
J.Biol.Chem., 290, 2015
5WRO
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BU of 5wro by Molmil
Crystal structure of Drosophila enolase
Descriptor: CADMIUM ION, CHLORIDE ION, COBALT (II) ION, ...
Authors:Zhang, Z, Shi, Z.
Deposit date:2016-12-02
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.015 Å)
Cite:Crystal structure of enolase from Drosophila melanogaster.
Acta Crystallogr F Struct Biol Commun, 73, 2017
2NCA
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BU of 2nca by Molmil
Structural Model for the N-terminal Domain of Human Cdc37
Descriptor: Hsp90 co-chaperone Cdc37
Authors:Zhang, Z, Keramisanou, D, Gelis, I.
Deposit date:2016-03-23
Release date:2016-05-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular Mechanism of Protein Kinase Recognition and Sorting by the Hsp90 Kinome-Specific Cochaperone Cdc37.
Mol.Cell, 62, 2016
2KKA
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BU of 2kka by Molmil
Human telomere DNA two-tetrad quadruplex structure in K+ solution
Descriptor: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
Authors:Zhang, Z, Dai, J, Yang, D.
Deposit date:2009-06-16
Release date:2009-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
2OPW
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BU of 2opw by Molmil
Crystal structure of human phytanoyl-CoA dioxygenase PHYHD1 (apo)
Descriptor: PHYHD1 protein
Authors:Zhang, Z, Butler, D, McDonough, M.A, Kavanagh, K.L, Bray, J.E, Ng, S.S, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Sundstrom, M, Schofield, C.J, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2007-01-30
Release date:2007-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human phytanoyl-CoA dioxygenase PHYHD1 (apo)
To be Published
7BZH
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BU of 7bzh by Molmil
Solution structure of a DNA binding protein from Sulfolobus islandicus
Descriptor: Sul7s
Authors:Zhang, Z, Liu, X.
Deposit date:2020-04-28
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Novel Family of Winged-Helix Single-Stranded DNA-Binding Proteins from Archaea.
Int J Mol Sci, 23, 2022
7CM5
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BU of 7cm5 by Molmil
Full-length Sarm1 in a self-inhibited state
Descriptor: NAD(+) hydrolase SARM1
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-24
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
7CM7
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BU of 7cm7 by Molmil
NAD+-bound Sarm1 E642A in the self-inhibited state
Descriptor: NAD(+) hydrolase SARM1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-25
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
7CM6
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BU of 7cm6 by Molmil
NAD+-bound Sarm1 in the self-inhibited state
Descriptor: NAD(+) hydrolase SARM1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-25
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
2JX0
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BU of 2jx0 by Molmil
The paxillin-binding domain (PBD) of G Protein Coupled Receptor (GPCR)-kinase (GRK) interacting protein 1 (GIT1)
Descriptor: ARF GTPase-activating protein GIT1
Authors:Zhang, Z, Guibao, C.D, Simmerman, J.A, Zheng, J.
Deposit date:2007-11-01
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:GIT1 paxillin-binding domain is a four-helix bundle, and it binds to both paxillin LD2 and LD4 motifs.
J.Biol.Chem., 283, 2008
6K9H
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BU of 6k9h by Molmil
Human LXR-beta in complex with an agonist
Descriptor: Oxysterols receptor LXR-beta, ~{tert}-butyl (2'~{S},3~{S})-2-oxidanylidene-2'-phenyl-spiro[1~{H}-indole-3,3'-pyrrolidine]-1'-carboxylate
Authors:Zhang, Z, Zhou, H.
Deposit date:2019-06-15
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of new LXR beta agonists as glioblastoma inhibitors.
Eur.J.Med.Chem., 194, 2020
6K10
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BU of 6k10 by Molmil
Non substrate bound state of Staphylococcus Aureus AldH
Descriptor: 1,2-ETHANEDIOL, Aldehyde dehydrogenase
Authors:Zhang, Z, Tao, X.
Deposit date:2019-05-08
Release date:2020-05-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.78962183 Å)
Cite:Structural Insight into the Substrate Gating Mechanism by Staphylococcus aureus Aldehyde Dehydrogenase
CCS Chemistry, 2, 2020

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