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PDB: 545 results

1BG5
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BU of 1bg5 by Molmil
CRYSTAL STRUCTURE OF THE ANKYRIN BINDING DOMAIN OF ALPHA-NA,K-ATPASE AS A FUSION PROTEIN WITH GLUTATHIONE S-TRANSFERASE
Descriptor: FUSION PROTEIN OF ALPHA-NA,K-ATPASE WITH GLUTATHIONE S-TRANSFERASE
Authors:Zhang, Z, Devarajan, P, Morrow, J.S.
Deposit date:1998-06-05
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the ankyrin-binding domain of alpha-Na,K-ATPase.
J.Biol.Chem., 273, 1998
3DZB
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BU of 3dzb by Molmil
Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
Descriptor: Prephenate dehydrogenase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-29
Release date:2008-08-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
To be Published
3FKD
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BU of 3fkd by Molmil
The crystal structure of L-threonine-O-3-phosphate decarboxylase from Porphyromonas gingivalis
Descriptor: L-threonine-O-3-phosphate decarboxylase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-16
Release date:2009-02-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of L-threonine-O-3-phosphate decarboxylase from Porphyromonas gingivalis
To be Published
6WGN
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BU of 6wgn by Molmil
Crystal structure of K-Ras(G12D) GppNHp bound to cyclic peptide ligand KD2
Descriptor: Cyclic Peptide KD2, GTPase KRas, MAGNESIUM ION, ...
Authors:Zhang, Z, Gao, R, Hu, Q, Peacock, H, Peacock, D.M, Shokat, K.M, Suga, H.
Deposit date:2020-04-06
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:GTP-State-Selective Cyclic Peptide Ligands of K-Ras(G12D) Block Its Interaction with Raf.
Acs Cent.Sci., 6, 2020
3D8V
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BU of 3d8v by Molmil
Crystal structure of GlmU from Mycobacterium tuberculosis in complex with uridine-diphosphate-N-acetylglucosamine
Descriptor: Bifunctional protein glmU, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Zhang, Z, Squire, C.J, Baker, E.N.
Deposit date:2008-05-25
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure and function of GlmU from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 65, 2009
3EVZ
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BU of 3evz by Molmil
Crystal structure of Methyltransferase from Pyrococcus furiosus
Descriptor: methyltransferase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-13
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of methyltransferase from Pyrococcus furiosus
To be Published
3EAF
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BU of 3eaf by Molmil
Crystal structure of ABC transporter, substrate binding protein Aeropyrum pernix
Descriptor: ABC transporter, substrate binding protein, GLYCEROL, ...
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-25
Release date:2008-09-09
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of ABC transporter, substrate binding protein Aeropyrum pernix
To be Published
3G0G
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BU of 3g0g by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinone inhibitor 3
Descriptor: 2-({2-[(3R)-3-aminopiperidin-1-yl]-5-bromo-6-oxopyrimidin-1(6H)-yl}methyl)benzonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
Deposit date:2009-01-27
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3G1W
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BU of 3g1w by Molmil
Crystal structure of sugar ABC transporter (sugar-binding protein) from Bacillus halodurans
Descriptor: Sugar ABC transporter
Authors:Zhang, Z, Eswaramoorthy, S, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-01-30
Release date:2009-02-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The crystal structure of sugar ABC transporter (sugar-binding protein) from Bacillus halodurans.
To be Published
3G0D
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BU of 3g0d by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 2
Descriptor: 2-({8-[(3R)-3-AMINOPIPERIDIN-1-YL]-1,3-DIMETHYL-2,6-DIOXO-1,2,3,6-TETRAHYDRO-7H-PURIN-7-YL}METHYL)BENZONITRILE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
Deposit date:2009-01-27
Release date:2010-02-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
2KKA
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BU of 2kka by Molmil
Human telomere DNA two-tetrad quadruplex structure in K+ solution
Descriptor: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
Authors:Zhang, Z, Dai, J, Yang, D.
Deposit date:2009-06-16
Release date:2009-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
8QO9
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BU of 8qo9 by Molmil
Cryo-EM structure of a human spliceosomal B complex protomer
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, MINX pre-mRNA, Microfibrillar-associated protein 1, ...
Authors:Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2023-09-28
Release date:2024-01-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (5.29 Å)
Cite:Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins.
Embo J., 43, 2024
8Q7N
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BU of 8q7n by Molmil
cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, MINX pre-mRNA, Microfibrillar-associated protein 1, ...
Authors:Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2023-08-16
Release date:2024-01-24
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins.
Embo J., 43, 2024
6LVX
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BU of 6lvx by Molmil
Crystal structure of TLR7/Cpd-1 (SM-374527) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-azanyl-2-butoxy-9-(phenylmethyl)-7H-purin-8-one, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
7XME
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BU of 7xme by Molmil
Structure of Influenza A virus polymerase basic protein 2 (PB2) with an azazindole derivative
Descriptor: (2~{S},3~{S})-3-[[5-dimethoxyphosphoryl-4-(5-fluoranyl-1~{H}-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid, IODIDE ION, Polymerase basic protein 2
Authors:Zhang, Z.
Deposit date:2022-04-25
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.521 Å)
Cite:Discovery of a novel azaindole derivatives targeting the influenza PB2 cap binding region
To Be Published
6MSM
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BU of 6msm by Molmil
Phosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ...
Authors:Zhang, Z, Liu, F, Chen, J.
Deposit date:2018-10-16
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular structure of the ATP-bound, phosphorylated human CFTR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2NCA
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BU of 2nca by Molmil
Structural Model for the N-terminal Domain of Human Cdc37
Descriptor: Hsp90 co-chaperone Cdc37
Authors:Zhang, Z, Keramisanou, D, Gelis, I.
Deposit date:2016-03-23
Release date:2016-05-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular Mechanism of Protein Kinase Recognition and Sorting by the Hsp90 Kinome-Specific Cochaperone Cdc37.
Mol.Cell, 62, 2016
7DEU
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BU of 7deu by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody scFv
Authors:Zhang, Z, Zhang, G, Li, X, Rao, Z, Guo, Y.
Deposit date:2020-11-05
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
6O1V
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BU of 6o1v by Molmil
Complex of human cystic fibrosis transmembrane conductance regulator (CFTR) and GLPG1837
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ...
Authors:Zhang, Z, Liu, F, Chen, J, Levit, A, Shoichet, B.
Deposit date:2019-02-21
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural identification of a hotspot on CFTR for potentiation.
Science, 364, 2019
8WH4
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BU of 8wh4 by Molmil
MPOX E5 hexamer ssDNA bound apo conformation
Descriptor: DNA (5'-D(P*CP*CP*CP*C)-3'), Uncoating factor OPG117
Authors:Zhang, Z, Dong, C.
Deposit date:2023-09-22
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH3
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BU of 8wh3 by Molmil
MPOX E5 hexamer apo form
Descriptor: Uncoating factor OPG117
Authors:Zhang, Z, Dong, C.
Deposit date:2023-09-22
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH6
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BU of 8wh6 by Molmil
MPOX E5 hexamer ADP and ssDNA bound and clear primase domain conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*CP*CP*C)-3'), Uncoating factor OPG117, ...
Authors:Zhang, Z, Dong, C.
Deposit date:2023-09-22
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WGZ
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BU of 8wgz by Molmil
MPOX E5 double hexamer ssDNA bound conformation
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*C)-3'), Uncoating factor OPG117
Authors:Zhang, Z, Dong, C.
Deposit date:2023-09-22
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WGY
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BU of 8wgy by Molmil
MPOX E5 hexamer AMP-PNP and ssDNA bound form with clear primase domain
Descriptor: DNA (5'-D(P*CP*CP*C)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Zhang, Z, Dong, C.
Deposit date:2023-09-22
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH0
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BU of 8wh0 by Molmil
MPOX E5 hexamer ssDNA and AMP-PNP bound conformation
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*C)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Zhang, Z, Dong, C.
Deposit date:2023-09-22
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024

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