Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1273 results

7XHE
DownloadVisualize
BU of 7xhe by Molmil
Crystal structure of CBP bromodomain liganded with CCS151
Descriptor: (6S)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3R)-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]-1-(3-fluoranyl-4-methoxy-phenyl)piperidin-2-one, 1,2-ETHANEDIOL, CREB-binding protein
Authors:Xu, H, Xiang, Q, Wang, C, Zhang, C, Luo, G, Wu, X, Zhang, Y, Xu, Y.
Deposit date:2022-04-08
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural insights revealed by the cocrystal structure of CCS1477 in complex with CBP bromodomain
Biochem.Biophys.Res.Commun., 623, 2022
7XH6
DownloadVisualize
BU of 7xh6 by Molmil
Crystal structure of CBP bromodomain liganded with CCS1477
Descriptor: (6S)-1-[3,4-bis(fluoranyl)phenyl]-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-(4-methoxycyclohexyl)benzimidazol-2-yl]piperidin-2-one, CREB-binding protein, DIMETHYL SULFOXIDE, ...
Authors:Xu, H, Xiang, Q, Wang, C, Zhang, C, Luo, G, Wu, X, Zhang, Y, Xu, Y.
Deposit date:2022-04-07
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural insights revealed by the cocrystal structure of CCS1477 in complex with CBP bromodomain
Biochem.Biophys.Res.Commun., 623, 2022
7XI0
DownloadVisualize
BU of 7xi0 by Molmil
Crystal structure of CBP bromodomain liganded with CCS150
Descriptor: (6S)-1-(3-chloranyl-4-methoxy-phenyl)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3R)-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]piperidin-2-one, CREB-binding protein, GLYCEROL
Authors:Xu, H, Xiang, Q, Wang, C, Zhang, C, Luo, G, Wu, X, Zhang, Y, Xu, Y.
Deposit date:2022-04-11
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural insights revealed by the cocrystal structure of CCS1477 in complex with CBP bromodomain
Biochem.Biophys.Res.Commun., 623, 2022
7VUA
DownloadVisualize
BU of 7vua by Molmil
Anaerobic hydroxyproline degradation involving C-N cleavage by a glycyl radical enzyme
Descriptor: (4S)-4-hydroxy-D-proline, HplG
Authors:Duan, Y, Lu, Q, Yuchi, Z, Zhang, Y.
Deposit date:2021-11-01
Release date:2022-06-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Anaerobic Hydroxyproline Degradation Involving C-N Cleavage by a Glycyl Radical Enzyme.
J.Am.Chem.Soc., 144, 2022
7F65
DownloadVisualize
BU of 7f65 by Molmil
Bacetrial Cocaine Esterase with mutations T172R/G173Q/V116K/S117A/A51L, bound to benzoic acid
Descriptor: BENZOIC ACID, Cocaine esterase, SULFATE ION
Authors:Ouyang, P.F, Zhang, Y, Tong, J.
Deposit date:2021-06-24
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Computational Design and Crystal Structure of a Highly Efficient Benzoylecgonine Hydrolase.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F0R
DownloadVisualize
BU of 7f0r by Molmil
Cryo-EM structure of Pseudomonas aeruginosa SutA transcription activation complex
Descriptor: DNA (70-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2021-06-06
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
2CEU
DownloadVisualize
BU of 2ceu by Molmil
Despentapeptide insulin in acetic acid (pH 2)
Descriptor: INSULIN, SULFATE ION
Authors:Whittingham, J.L, Zhang, Y, Zakova, L, Dodson, E.J, Turkenburg, J.P, Brange, J, Dodson, G.G.
Deposit date:2006-02-10
Release date:2006-03-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:I222 Crystal Form of Despentapeptide (B26-B30) Insulin Provides New Insights Into the Properties of Monomeric Insulin.
Acta Crystallogr.,Sect.D, 62, 2006
7VF6
DownloadVisualize
BU of 7vf6 by Molmil
The crystal structure of PurZ0
Descriptor: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, ...
Authors:Tong, Y, Zhang, Y.
Deposit date:2021-09-10
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage.
Nat Microbiol, 8, 2023
8QRH
DownloadVisualize
BU of 8qrh by Molmil
Inactivated tick-borne encephalitis virus (TBEV) vaccine strain Sofjin-Chumakov
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Genome polyprotein, Small envelope protein M
Authors:Moiseenko, A.V, Zhang, Y, Vorovitch, M, Ivanova, A, Liu, Z, Osolodkin, D.I, Egorov, A, Ishmukhametov, A, Sokolova, O.S.
Deposit date:2023-10-07
Release date:2024-06-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The structure of inactivated mature tick-borne encephalitis virus at 3.0 angstrom resolution.
Emerg Microbes Infect, 13, 2024
3C2T
DownloadVisualize
BU of 3c2t by Molmil
Evolution of chlorella virus dUTPase
Descriptor: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
Authors:Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
Deposit date:2008-01-25
Release date:2009-02-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
3CA9
DownloadVisualize
BU of 3ca9 by Molmil
Evolution of chlorella virus dUTPase
Descriptor: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
Authors:Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
Deposit date:2008-02-19
Release date:2009-03-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
7VF9
DownloadVisualize
BU of 7vf9 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2021-09-10
Release date:2022-07-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7XL4
DownloadVisualize
BU of 7xl4 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7XL3
DownloadVisualize
BU of 7xl3 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7E14
DownloadVisualize
BU of 7e14 by Molmil
Compound2_GLP-1R_OWL833_Gs complex structure
Descriptor: 3-[(1S,2S)-1-(5-[(4S)-2,2-dimethyloxan-4-yl]-2-{(4S)-2-(4-fluoro-3,5-dimethylphenyl)-3-[3-(4-fluoro-1-methyl-1H-indazol-5-yl)-2-oxo-2,3-dihydro-1H-imidazol-1-yl]-4-methyl-2,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carbonyl}-1H-indol-1-yl)-2-methylcyclopropyl]-1,2,4-oxadiazol-5(4H)-one, CHOLESTEROL, G protein, ...
Authors:Cong, Z.T, Chen, L.N, Ma, H.L, Yang, D.H, Xu, H.E, Zhang, Y, Wang, M.W.
Deposit date:2021-01-30
Release date:2021-07-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular insights into ago-allosteric modulation of the human glucagon-like peptide-1 receptor.
Nat Commun, 12, 2021
7DUQ
DownloadVisualize
BU of 7duq by Molmil
Cryo-EM structure of the compound 2 and GLP-1-bound human GLP-1 receptor-Gs complex
Descriptor: CHOLESTEROL, Glucagon-like peptide 1, Glucagon-like peptide 1 receptor, ...
Authors:Cong, Z, Chen, L, Ma, H, Zhou, Q, Zou, X, Ye, C, Dai, A, Liu, Q, Huang, W, Sun, X, Wang, X, Xu, P, Zhao, L, Xia, T, Zhong, W, Yang, D, Xu, H.E, Zhang, Y, Wang, M.
Deposit date:2021-01-11
Release date:2021-07-14
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Molecular insights into ago-allosteric modulation of the human glucagon-like peptide-1 receptor.
Nat Commun, 12, 2021
7DUR
DownloadVisualize
BU of 7dur by Molmil
Cryo-EM structure of the compound 2-bound human GLP-1 receptor-Gs complex
Descriptor: CHOLESTEROL, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Cong, Z, Chen, L, Ma, H, Zhou, Q, Zou, X, Ye, C, Dai, A, Liu, Q, Huang, W, Sun, X, Wang, X, Xu, P, Zhao, L, Xia, T, Zhong, W, Yang, D, Xu, H.E, Zhang, Y, Wang, M.
Deposit date:2021-01-11
Release date:2021-08-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular insights into ago-allosteric modulation of the human glucagon-like peptide-1 receptor.
Nat Commun, 12, 2021
7EGT
DownloadVisualize
BU of 7egt by Molmil
The crystal structure of the C-terminal domain of T. thermophilus UvrD complexed with the N-terminal domain of UvrB
Descriptor: DNA helicase UvrD, UvrABC system protein B
Authors:Zheng, F, Shen, L, Li, L, Zhang, Y.
Deposit date:2021-03-26
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.581 Å)
Cite:Crucial role and mechanism of transcription-coupled DNA repair in bacteria.
Nature, 604, 2022
7EVM
DownloadVisualize
BU of 7evm by Molmil
Cryo-EM structure of the compound 2-bound human GLP-1 receptor-Gs complex
Descriptor: CHOLESTEROL, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Cong, Z, Chen, L, Ma, H, Zhou, Q, Zou, X, Ye, C, Dai, A, Liu, Q, Huang, W, Sun, X, Wang, X, Xu, P, Zhao, L, Xia, T, Zhong, W, Yang, D, Xu, H.E, Zhang, Y, Wang, M.
Deposit date:2021-05-21
Release date:2021-08-11
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Molecular insights into ago-allosteric modulation of the human glucagon-like peptide-1 receptor.
Nat Commun, 12, 2021
7JJO
DownloadVisualize
BU of 7jjo by Molmil
Structural Basis of the Activation of Heterotrimeric Gs-protein by Isoproterenol-bound Beta1-Adrenergic Receptor
Descriptor: Beta1-Adrenergic Receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Su, M, Zhu, L, Zhang, Y, Paknejad, N, Dey, R, Huang, J, Lee, M.Y, Williams, D, Jordan, K.D, Eng, E.T, Ernst, O.P, Meyerson, J.R, Hite, R.K, Walz, T, Liu, W, Huang, X.Y.
Deposit date:2020-07-27
Release date:2020-09-02
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural Basis of the Activation of Heterotrimeric Gs-Protein by Isoproterenol-Bound beta 1 -Adrenergic Receptor.
Mol.Cell, 80, 2020
7VDE
DownloadVisualize
BU of 7vde by Molmil
3.6 A structure of the human hemoglobin
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fan, H.C, Zhang, Y, Sun, F.
Deposit date:2021-09-06
Release date:2021-12-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A cryo-electron microscopy support film formed by 2D crystals of hydrophobin HFBI.
Nat Commun, 12, 2021
7VDA
DownloadVisualize
BU of 7vda by Molmil
2.26 A structure of the glutamate dehydrogenase
Descriptor: Glutamate dehydrogenase 1, mitochondrial
Authors:Fan, H.C, Zhang, Y, Sun, F.
Deposit date:2021-09-06
Release date:2021-12-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:A cryo-electron microscopy support film formed by 2D crystals of hydrophobin HFBI.
Nat Commun, 12, 2021
7VDC
DownloadVisualize
BU of 7vdc by Molmil
3.28 A structure of the rabbit muscle aldolase
Descriptor: Fructose-bisphosphate aldolase A
Authors:Fan, H.C, Zhang, Y, Sun, F.
Deposit date:2021-09-06
Release date:2021-12-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:A cryo-electron microscopy support film formed by 2D crystals of hydrophobin HFBI.
Nat Commun, 12, 2021
7VD8
DownloadVisualize
BU of 7vd8 by Molmil
1.96 A structure of human apoferritin obtained from Talos Arctica microscope
Descriptor: Ferritin heavy chain, SODIUM ION, ZINC ION
Authors:Fan, H.C, Zhang, Y, Sun, F.
Deposit date:2021-09-06
Release date:2021-12-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (1.96 Å)
Cite:A cryo-electron microscopy support film formed by 2D crystals of hydrophobin HFBI.
Nat Commun, 12, 2021
7VDF
DownloadVisualize
BU of 7vdf by Molmil
2.56 A structure of influenza hemagglutinin (HA) trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, beta-D-mannopyranose
Authors:Fan, H.C, Zhang, Y, Sun, F.
Deposit date:2021-09-06
Release date:2021-12-29
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:A cryo-electron microscopy support film formed by 2D crystals of hydrophobin HFBI.
Nat Commun, 12, 2021

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon