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PDB: 301 results

8CXO
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Cryo-EM structure of the unliganded mSMO-PGS2 in a lipidic environment
Descriptor: CHOLESTEROL, Smoothened homolog, GlgA glycogen synthase chimera
Authors:Zhang, K, Wu, H, Hoppe, N, Manglik, A, Cheng, Y.
Deposit date:2022-05-22
Release date:2022-08-03
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Fusion protein strategies for cryo-EM study of G protein-coupled receptors.
Nat Commun, 13, 2022
7MZ5
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BU of 7mz5 by Molmil
Cryo-EM structure of RTX-bound full-length TRPV1 in C2 state
Descriptor: SODIUM ION, Transient receptor potential cation channel subfamily V member 1, resiniferatoxin
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZ6
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BU of 7mz6 by Molmil
Cryo-EM structure of minimal TRPV1 with 1 perturbed PI
Descriptor: (10R,13S)-16-amino-13-hydroxy-7,13-dioxo-8,12,14-trioxa-13lambda~5~-phosphahexadecan-10-yl hexadecanoate, (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate, SODIUM ION, ...
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZE
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BU of 7mze by Molmil
Cryo-EM structure of minimal TRPV1 with 2 bound RTX in opposite pockets
Descriptor: (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1, ...
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZ9
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BU of 7mz9 by Molmil
Cryo-EM structure of minimal TRPV1 with 1 partially bound RTX
Descriptor: (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1, ...
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZB
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BU of 7mzb by Molmil
Cryo-EM structure of minimal TRPV1 with 3 bound RTX and 1 perturbed PI
Descriptor: (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1, ...
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZC
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BU of 7mzc by Molmil
Cryo-EM structure of minimal TRPV1 with RTX bound in C1 state
Descriptor: SODIUM ION, Transient receptor potential cation channel subfamily V member 1, resiniferatoxin
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZA
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BU of 7mza by Molmil
Cryo-EM structure of minimal TRPV1 with 2 bound RTX in adjacent pockets
Descriptor: (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1, ...
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZ7
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BU of 7mz7 by Molmil
Cryo-EM structure of minimal TRPV1 with 4 partially bound RTX
Descriptor: SODIUM ION, Transient receptor potential cation channel subfamily V member 1, resiniferatoxin
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZD
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BU of 7mzd by Molmil
Cryo-EM structure of minimal TRPV1 with RTX bound in C2 state
Descriptor: SODIUM ION, Transient receptor potential cation channel subfamily V member 1, resiniferatoxin
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
6VQV
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BU of 6vqv by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF9
Descriptor: AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQW
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BU of 6vqw by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF8
Descriptor: AcrF8, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQX
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BU of 6vqx by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF6
Descriptor: AcrF6, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6N34
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BU of 6n34 by Molmil
Crystal structure of the BTB domain of Human NS1-BP
Descriptor: Influenza virus NS1A-binding protein
Authors:Zhang, K, Shang, G, Padavannil, A, Fontoura, B, Chook, Y.M.
Deposit date:2018-11-14
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6N3H
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BU of 6n3h by Molmil
Crystal structure of Kelch domain of the human NS1 binding protein
Descriptor: Influenza virus NS1A-binding protein
Authors:Zhang, K, Shang, G, Padavannil, A, Fontoura, B.M.A, Chook, Y.M.
Deposit date:2018-11-15
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3EPU
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BU of 3epu by Molmil
Crystal Structure of STM2138, a novel virulence chaperone in Salmonella
Descriptor: STM2138 Virulence Chaperone
Authors:Zhang, K, Andres, S.N, Hannemann, M, Coombes, B, Junop, M.
Deposit date:2008-09-30
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis and quantitative proteomic interactome of a novel virulence chaperone in Salmonella
To be Published
6NUD
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BU of 6nud by Molmil
Small conformation of ssRNA-bound CRISPR_Csm complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
Authors:Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
Deposit date:2019-01-31
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Cell Res., 29, 2019
6NUE
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BU of 6nue by Molmil
Small conformation of apo CRISPR_Csm complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
Authors:Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
Deposit date:2019-01-31
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Cell Res., 29, 2019
2GMW
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BU of 2gmw by Molmil
Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli.
Descriptor: D,D-heptose 1,7-bisphosphate phosphatase, ZINC ION
Authors:Zhang, K, DeLeon, G, Wright, G.D, Junop, M.S.
Deposit date:2006-04-07
Release date:2007-04-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and kinetic characterization of the LPS biosynthetic enzyme D-alpha,beta-D-heptose-1,7-bisphosphate phosphatase (GmhB) from Escherichia coli.
Biochemistry, 49, 2010
5FGL
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BU of 5fgl by Molmil
Co-crystal Structure of NicR2_Hsp
Descriptor: 4-oxidanylidene-4-(6-oxidanylidene-1~{H}-pyridin-3-yl)butanoic acid, NicR
Authors:Zhang, K, Tang, H, Wu, G, Wang, W, Hu, H, Xu, P.
Deposit date:2015-12-21
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Co-crystal Structure of NicR2_Hsp
To Be Published
7DOP
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BU of 7dop by Molmil
Structural insights into viral RNA capping and plasma membrane targeting by Chikungunya virus nonstructural protein 1
Descriptor: Nonstructural Protein 1, ZINC ION
Authors:Zhang, K, Law, Y.S, Law, M.C.Y, Tan, Y.B, Wirawan, M, Luo, D.H.
Deposit date:2020-12-15
Release date:2021-03-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Structural insights into viral RNA capping and plasma membrane targeting by Chikungunya virus nonstructural protein 1.
Cell Host Microbe, 29, 2021
7FGG
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BU of 7fgg by Molmil
Cryo-EM Structure of Chikungunya Virus Nonstructural Protein 1 with m7GTP
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zhang, K, Law, M.C.Y, Nguyen, T.M, Tan, Y.B, Wirawan, M, Law, Y.S, Luo, D.H.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.19 Å)
Cite:Molecular basis of specific viral RNA recognition and 5'-end capping by the Chikungunya virus nsP1.
Cell Rep, 40, 2022
7FGH
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BU of 7fgh by Molmil
Cryo-EM Structure of Chikungunya Virus Nonstructural Protein 1 with m7GMP
Descriptor: N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, ...
Authors:Zhang, K, Law, M.C.Y, Nguyen, T.M, Tan, Y.B, Wirawan, M, Law, Y.S, Luo, D.H.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (2.18 Å)
Cite:Molecular basis of specific viral RNA recognition and 5'-end capping by the Chikungunya virus nsP1.
Cell Rep, 40, 2022
7FGI
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BU of 7fgi by Molmil
Cryo-EM Structure of Chikungunya Virus Nonstructural Protein 1 with m7Gppp-AU
Descriptor: MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, ...
Authors:Zhang, K, Law, M.C.Y, Nguyen, T.M, Tan, Y.B, Wirawan, M, Law, Y.S, Luo, D.H.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Molecular basis of specific viral RNA recognition and 5'-end capping by the Chikungunya virus nsP1.
Cell Rep, 40, 2022
3KH8
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BU of 3kh8 by Molmil
Crystal structure of MaoC-like dehydratase from Phytophthora Capsici
Descriptor: MaoC-like dehydratase
Authors:Wang, H, Zhang, K, Guo, J, Zhou, Q, Zheng, X, Sun, F, Pang, H, Zhang, X.
Deposit date:2009-10-30
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of MaoC-like dehydratase from Phytophthora Capsici
To be Published

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