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PDB: 166 results

6KNZ
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BU of 6knz by Molmil
Crystal structure of T2R-TTL-KXO1 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[5-[4-(2-morpholin-4-ylethoxy)phenyl]pyridin-2-yl]-~{N}-(phenylmethyl)ethanamide, CALCIUM ION, ...
Authors:Chen, Q, Yu, Y.
Deposit date:2019-08-07
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.475 Å)
Cite:Reversible binding of the anticancer drug KXO1 (tirbanibulin) to the colchicine-binding site of beta-tubulin explains KXO1's low clinical toxicity.
J.Biol.Chem., 294, 2019
8H18
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BU of 8h18 by Molmil
Crystal structure of DnaQ domain of Streptococcus thermophilus strain DGCC 7710
Descriptor: DnaQ, GLYCEROL, MAGNESIUM ION
Authors:Chen, Q, Yu, Y.
Deposit date:2022-10-01
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:DnaQ mediates directional spacer acquisition in the CRISPR-Cas system by a time-dependent mechanism.
Innovation (N Y), 4, 2023
8WCF
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BU of 8wcf by Molmil
Crystal structure of EcThsB
Descriptor: Molecular chaperone Tir, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Chen, Q, Yu, Y.
Deposit date:2023-09-12
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Self-association activates ThsB NAD+ hydrolase for defense against phage infection
To Be Published
8WC0
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BU of 8wc0 by Molmil
Crystal structure of EcThsA
Descriptor: GLYCEROL, NAD(+) hydrolase ThsA, SODIUM ION, ...
Authors:Chen, Q, Yu, Y.
Deposit date:2023-09-11
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Self-association activates ThsB NAD+ hydrolase for defense against phage infection
To Be Published
8H2F
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BU of 8h2f by Molmil
Crystal structure of DnaQ domain in complex witn TMP of Streptococcus thermophilus strain DGCC 7710
Descriptor: DnaQ, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE
Authors:Chen, Q, Yu, Y.
Deposit date:2022-10-05
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.448 Å)
Cite:DnaQ mediates directional spacer acquisition in the CRISPR-Cas system by a time-dependent mechanism.
Innovation (N Y), 4, 2023
7D7E
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BU of 7d7e by Molmil
Structure of PKD1L3-CTD/PKD2L1 in apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Polycystic kidney disease 2-like 1 protein, ...
Authors:Su, Q, Chen, M, Li, B, Wang, Y, Jing, D, Zhan, X, Yu, Y, Shi, Y.
Deposit date:2020-10-03
Release date:2021-08-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for Ca 2+ activation of the heteromeric PKD1L3/PKD2L1 channel.
Nat Commun, 12, 2021
7CDA
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BU of 7cda by Molmil
Crystal structure of T2R-TTL-PAC complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
Deposit date:2020-06-19
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.659 Å)
Cite:Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond.
J.Med.Chem., 65, 2022
7CEK
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BU of 7cek by Molmil
Crystal structure of T2R-TTL-BML-284 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
Deposit date:2020-06-23
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.696 Å)
Cite:Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond.
J.Med.Chem., 65, 2022
7CE6
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BU of 7ce6 by Molmil
Crystal structure of T2R-TTL-Compound9 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
Deposit date:2020-06-22
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond.
J.Med.Chem., 65, 2022
7CLD
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BU of 7cld by Molmil
Crystal structure of T2R-TTL-Cevipabulin complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-[2,6-bis(fluoranyl)-4-[3-(methylamino)propoxy]phenyl]-5-chloranyl-N-[(2S)-1,1,1-tris(fluoranyl)propan-2-yl]-[1,2,4]triazolo[1,5-a]pyrimidin-7-amine, CALCIUM ION, ...
Authors:Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
Deposit date:2020-07-20
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:Cevipabulin-tubulin complex reveals a novel agent binding site on alpha-tubulin with tubulin degradation effect.
Sci Adv, 7, 2021
7DP8
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BU of 7dp8 by Molmil
Crystal structure of T2R-TTL-Cevipabulin-eribulin complex
Descriptor: (1S,3S,6S,9S,12S,14R,16R,18S,20R,21R,22S,26R,29S,31R,32S,33R,35R,36S)-20-[(2S)-3-amino-2-hydroxypropyl]-21-methoxy-14-methyl-8,15-dimethylidene-2,19,30,34,37,39,40,41-octaoxanonacyclo[24.9.2.1~3,32~.1~3,33~.1~6,9~.1~12,16~.0~18,22~.0~29,36~.0~31,35~]hentetracontan-24-one (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-[2,6-bis(fluoranyl)-4-[3-(methylamino)propoxy]phenyl]-5-chloranyl-N-[(2S)-1,1,1-tris(fluoranyl)propan-2-yl]-[1,2,4]triazolo[1,5-a]pyrimidin-7-amine, ...
Authors:Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
Deposit date:2020-12-18
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.446 Å)
Cite:Cevipabulin-tubulin complex reveals a novel agent binding site on alpha-tubulin with tubulin degradation effect.
Sci Adv, 7, 2021
5YT7
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BU of 5yt7 by Molmil
crystal structure of circularly permutated Azurin 3
Descriptor: Azurin, CALCIUM ION, CHLORIDE ION, ...
Authors:Chen, H.H, Liu, H.P, Yu, Y.
Deposit date:2017-11-17
Release date:2018-08-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Engineering the Metal-binding Loop of a Blue Copper Protein by Circular Permutation
Rsc Adv, 2017
6KV2
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BU of 6kv2 by Molmil
Crystal structure of trypsin inhibitor 1 from Senna obtusifolia
Descriptor: Trypsin inhibitor 1
Authors:Liao, H, Yu, Y.
Deposit date:2019-09-03
Release date:2020-02-19
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural and functional relationship of Cassia obtusifolia trypsin inhibitor to understand its digestive resistance against Pieris rapae.
Int.J.Biol.Macromol., 148, 2020
7WM7
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BU of 7wm7 by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[5-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)pentyl]-3-oxidanyl-N-[[3-(1-oxidanylidene-2,3-dihydroisoindol-5-yl)phenyl]methyl]butanamide, Threonine--tRNA ligase, ZINC ION
Authors:Cai, Z, Chen, B, Yu, Y, Zhou, H.
Deposit date:2022-01-14
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design, Synthesis, and Proof-of-Concept of Triple-Site Inhibitors against Aminoacyl-tRNA Synthetases.
J.Med.Chem., 65, 2022
7WMI
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BU of 7wmi by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[(1R)-2-[3-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)propanoylamino]-1-(3-phenylphenyl)ethyl]-3-oxidanyl-butanamide, 1,2-ETHANEDIOL, Threonine--tRNA ligase, ...
Authors:Cai, Z, Chen, B, Yu, Y, Zhou, H.
Deposit date:2022-01-14
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, Synthesis, and Proof-of-Concept of Triple-Site Inhibitors against Aminoacyl-tRNA Synthetases.
J.Med.Chem., 65, 2022
7WMF
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BU of 7wmf by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[(1R)-2-[3-[6,7-bis(chloranyl)-4-oxidanylidene-quinazolin-3-yl]propanoylamino]-1-[3-[4-(trifluoromethyl)phenyl]phenyl]ethyl]-3-oxidanyl-butanamide, 1,2-ETHANEDIOL, Threonine--tRNA ligase, ...
Authors:Cai, Z, Chen, B, Yu, Y, Zhou, H.
Deposit date:2022-01-14
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Design, Synthesis, and Proof-of-Concept of Triple-Site Inhibitors against Aminoacyl-tRNA Synthetases.
J.Med.Chem., 65, 2022

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