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PDB: 142 件

7Q4N
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transcription factor CDX2 bound to hydroxymethylated DNA
分子名称: DNA (18-MER), Homeobox protein CDX-2
著者Morgunova, E, Yin, Y, Popov, A, Taipale, J.
登録日2021-11-01
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献transcription factor CDX2 bound to hydroxymethylated DNA
To Be Published
5I9F
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BU of 5i9f by Molmil
Crystal structure of designed pentatricopeptide repeat protein dPPR-U10 in complex with its target RNA U10
分子名称: RNA (5'-R(*GP*GP*GP*GP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*CP*CP*CP*C)-3'), pentatricopeptide repeat protein dPPR-U10
著者Shen, C, Zhang, D, Guan, Z, Zou, T, Yin, Y.
登録日2016-02-20
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Structural basis for specific single-stranded RNA recognition by designer pentatricopeptide repeat proteins.
Nat Commun, 7, 2016
8EW6
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Anti-human CD8 VHH complex with CD8 alpha
分子名称: Anti-CD8 alpha VHH, T-cell surface glycoprotein CD8 alpha chain
著者Kiefer, J.R, Williams, S, Davies, C.W, Koerber, J.T, Sriraman, S.K, Yin, Y.P.
登録日2022-10-21
公開日2022-11-23
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.904 Å)
主引用文献Development of an 18 F-labeled anti-human CD8 VHH for same-day immunoPET imaging.
Eur J Nucl Med Mol Imaging, 50, 2023
5NO6
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TEAD4-HOXB13 complex bound to DNA
分子名称: DNA, Homeobox protein Hox-B13, Transcriptional enhancer factor TEF-3
著者Morgunova, E, Jolma, A, Yin, Y, Popov, A, Taipale, J.
登録日2017-04-11
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献TEAD4-HOXB13 complex bound to DNA
To Be Published
8UDL
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Human Mitochondrial DNA Polymerase Gamma Binary Complex
分子名称: DNA (5'-D(P*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*TP*AP*C)-3'), DNA (5'-D(P*AP*GP*GP*TP*AP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*T)-3'), DNA polymerase subunit gamma-1, ...
著者Park, J, Yin, Y.W.
登録日2023-09-28
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献An interaction network in the polymerase active site is a prerequisite for Watson-Crick base pairing in Pol gamma.
Sci Adv, 10, 2024
8PN4
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transcription factor BARHL2 bound to DNA sequences
分子名称: ACETATE ION, BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Yin, Y, Popov, A, Taipale, J.
登録日2023-06-29
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
8PM5
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BU of 8pm5 by Molmil
transcription factor BARHL2 bound to TAAAT DNA sequence
分子名称: BarH-like 2 homeobox protein, DNA (5'-D(*AP*AP*CP*CP*AP*TP*TP*TP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*AP*AP*AP*TP*GP*GP*TP*T)-3')
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-28
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
5TDH
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BU of 5tdh by Molmil
The crystal structure of the dominant negative mutant G protein alpha(i)-1-beta-1-gamma-2 G203A/A326S
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Liu, P, Jia, M.-Z, Zhou, X.E, de Waal, P.W, Dickson, B.M, Liu, B, Hou, L, Yin, Y.-T, Kang, Y.-Y, Shi, Y, Melcher, K, Xu, H.E, Jiang, Y.
登録日2016-09-19
公開日2016-11-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structural basis of the dominant negative phenotype of the G alpha i1 beta 1 gamma 2 G203A/A326S heterotrimer
Acta Pharmacol.Sin., 37, 2016
7Z5I
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Transcription factor MYF5 bound to symmetrical site
分子名称: DNA (5'-D(P*AP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*T)-3'), Myogenic factor 5
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2022-03-09
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Transcription factor MYF5 bound to symmetrical site
To Be Published
7Z5K
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Transcription factor MYF5 bound to non-symmetrical site
分子名称: DNA (5'-D(P*AP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*TP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*AP*AP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*T)-3'), Myogenic factor 5
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2022-03-09
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Transcription factor MYF5 bound to non-symmetrical site
To Be Published
1O8T
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BU of 1o8t by Molmil
Global Structure and Dynamics of Human Apolipoprotein CII in Complex with Micelles: Evidence for increased mobility of the helix involved in the activation of lipoprotein lipase
分子名称: APOLIPOPROTEIN C-II
著者Zdunek, J, Martinez, G.V, Schleucher, J, Lycksell, P.O, Yin, Y, Nilsson, S, Shen, Y, Olivecrona, G, Wijmenga, S.
登録日2002-11-29
公開日2003-02-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Global Structure and Dynamics of Human Apolipoprotein Cii in Complex with Micelles: Evidence for Increased Mobility of the Helix Involved in the Activation of Lipoprotein Lipase
Biochemistry, 42, 2003
8EQB
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BU of 8eqb by Molmil
FAM46C/BCCIPalpha/Nanobody complex
分子名称: Isoform 2 of BRCA2 and CDKN1A-interacting protein, Synthetic nanobody 1, Terminal nucleotidyltransferase 5C
著者Liu, S, Chen, H, Yin, Y, Bai, X, Zhang, X.
登録日2022-10-07
公開日2023-03-15
最終更新日2023-04-26
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Inhibition of FAM46/TENT5 activity by BCCIP alpha adopting a unique fold.
Sci Adv, 9, 2023
8PE9
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BU of 8pe9 by Molmil
Complex between DDR1 DS-like domain and PRTH-101 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Liu, J, Chiang, H, Xiong, W, Laurent, V, Griffiths, S.C, Duelfer, J, Deng, H, Sun, X, Yin, Y.W, Li, W, Audoly, L.P, An, Z, Schuerpf, T, Li, R, Zhang, N.
登録日2023-06-13
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.152 Å)
主引用文献A highly selective humanized DDR1 mAb reverses immune exclusion by disrupting collagen fiber alignment in breast cancer.
J Immunother Cancer, 11, 2023
8PMF
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BU of 8pmf by Molmil
transcription factor BARHL2 bound to DNA sequences
分子名称: BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-28
公開日2024-07-10
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
8PMN
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BU of 8pmn by Molmil
transcription factor BARHL2 bound to DNA sequences
分子名称: BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-29
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
8PM7
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BU of 8pm7 by Molmil
transcription factor BARHL2 bound to TAATC DNA sequence
分子名称: BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-28
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
8PNA
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BU of 8pna by Molmil
transcription factor BARHL2 bound to TAATG DNA sequence
分子名称: ACETATE ION, BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献transcription factor BARHL2 bound to different DNA sequences
To Be Published
8PMC
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BU of 8pmc by Molmil
transcription factor BARHL2 bound to TAATT DNA sequence
分子名称: BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-28
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
8PNC
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BU of 8pnc by Molmil
Transcription factor BARHL2 bound to TAAGT DNA sequence
分子名称: BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Transcription factor BARHL2 bound to different DNA sequences
To Be Published
8PMV
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BU of 8pmv by Molmil
transcription factor BARHL2 bound to TAAGC DNA sequence
分子名称: BarH-like 2 homeobox protein, DNA
著者Morgunova, E, Popov, A, Yin, Y, Taipale, J.
登録日2023-06-29
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献transcription factor BARHL2 bound to DNA sequences
To Be Published
5GWN
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BU of 5gwn by Molmil
Crystal structure of human RCC2
分子名称: Protein RCC2, SULFATE ION
著者Liang, L, Yun, C.H, Yin, Y.X.
登録日2016-09-12
公開日2017-09-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.309 Å)
主引用文献RCC2 is a novel p53 target in suppressing metastasis.
Oncogene, 37, 2018
8SWK
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Cryo-EM structure of NLRP3 closed hexamer
分子名称: 1-[4-(2-oxidanylpropan-2-yl)furan-2-yl]sulfonyl-3-(1,2,3,5-tetrahydro-s-indacen-4-yl)urea, ADENOSINE-5'-TRIPHOSPHATE, NACHT, ...
著者Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
登録日2023-05-18
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.32 Å)
主引用文献Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
8SXN
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Structure of NLRP3 and NEK7 complex
分子名称: 1-[4-(2-oxidanylpropan-2-yl)furan-2-yl]sulfonyl-3-(1,2,3,5-tetrahydro-s-indacen-4-yl)urea, ADENOSINE-5'-TRIPHOSPHATE, NACHT, ...
著者Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
登録日2023-05-22
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
8SWF
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Cryo-EM structure of NLRP3 open octamer
分子名称: NACHT, LRR and PYD domains-containing protein 3
著者Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
登録日2023-05-18
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
3IKL
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BU of 3ikl by Molmil
Crystal structure of Pol gB delta-I4.
分子名称: DNA polymerase subunit gamma-2, mitochondrial
著者Lee, Y.S, Kennedy, W.D, Yin, Y.W.
登録日2009-08-06
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural insight into processive human mitochondrial DNA synthesis and disease-related polymerase mutations.
Cell(Cambridge,Mass.), 139, 2009

224004

件を2024-08-21に公開中

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