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PDB: 42 results

8V1S
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BU of 8v1s by Molmil
Herpes simplex virus 1 polymerase holoenzyme bound to mismatched DNA in editing conformation
Descriptor: DNA polymerase, DNA polymerase processivity factor, MAGNESIUM ION, ...
Authors:Pan, J, Abraham, J, Coen, D.M, Shankar, S, Yang, P, Hogle, J.
Deposit date:2023-11-21
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance.
Cell, 187, 2024
8HLT
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BU of 8hlt by Molmil
The co-crystal structure of DYRK2 with YK-2-99B
Descriptor: (6-{[(4P)-4-(1,3-benzothiazol-5-yl)-5-fluoropyrimidin-2-yl]amino}pyridin-3-yl)(piperazin-1-yl)methanone, Dual specificity tyrosine-phosphorylation-regulated kinase 2
Authors:Shen, H.T, Xiao, Y.B, Yuan, K, Yang, P, Li, Q.N.
Deposit date:2022-12-01
Release date:2023-12-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of Potent DYRK2 Inhibitors with High Selectivity, Great Solubility, and Excellent Safety Properties for the Treatment of Prostate Cancer.
J.Med.Chem., 66, 2023
7SN2
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BU of 7sn2 by Molmil
Structure of human SARS-CoV-2 neutralizing antibody C1C-A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pan, J, Abraham, J, Yang, P, Shankar, S.
Deposit date:2021-10-27
Release date:2021-12-08
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis for continued antibody evasion by the SARS-CoV-2 receptor binding domain.
Science, 375, 2022
6JHR
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BU of 6jhr by Molmil
The cryo-EM structure of HAV bound to a neutralizing antibody-F6
Descriptor: FAB Heavy Chain, FAB Light Chain, VP1, ...
Authors:Cao, L, Liu, P, Yang, P, Gao, Q, Li, H, Sun, Y, Zhu, L, Lin, J, Su, D, Rao, Z, Wang, X.
Deposit date:2019-02-18
Release date:2020-03-18
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Structural basis for neutralization of hepatitis A virus informs a rational design of highly potent inhibitors.
Plos Biol., 17, 2019
6JHQ
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BU of 6jhq by Molmil
The cryo-EM structure of HAV bound to a neutralizing antibody-F4
Descriptor: FAB Heavy Chain, FAB Light Chain, VP1, ...
Authors:Cao, L, Liu, P, Yang, P, Gao, Q, Li, H, Sun, Y, Zhu, L, Lin, J, Su, D, Rao, Z, Wang, X.
Deposit date:2019-02-18
Release date:2020-03-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for neutralization of hepatitis A virus informs a rational design of highly potent inhibitors.
Plos Biol., 17, 2019
6JHS
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BU of 6jhs by Molmil
The cryo-EM structure of HAV bound to a neutralizing antibody-F7
Descriptor: FAB Heavy Chain, FAB Light Chain, VP1, ...
Authors:Cao, L, Liu, P, Yang, P, Gao, Q, Li, H, Sun, Y, Zhu, L, Lin, J, Su, D, Rao, Z, Wang, X.
Deposit date:2019-02-19
Release date:2020-03-18
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural basis for neutralization of hepatitis A virus informs a rational design of highly potent inhibitors.
Plos Biol., 17, 2019
6JHT
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BU of 6jht by Molmil
The cryo-EM structure of HAV bound to a neutralizing antibody-F9
Descriptor: FAB Heavy Chain, FAB Light Chain, VP1, ...
Authors:Cao, L, Liu, P, Yang, P, Gao, Q, Li, H, Sun, Y, Zhu, L, Lin, J, Su, D, Rao, Z, Wang, X.
Deposit date:2019-02-19
Release date:2020-03-18
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Structural basis for neutralization of hepatitis A virus informs a rational design of highly potent inhibitors.
Plos Biol., 17, 2019
7YUY
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BU of 7yuy by Molmil
Structure of a mutated membrane-bound glycosyltransferase
Descriptor: (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate, 1,3-beta-glucan synthase component FKS1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hu, X.L, Yang, P, Zhang, M, Liu, X.T, Yu, H.J.
Deposit date:2022-08-18
Release date:2023-03-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and mechanistic insights into fungal beta-1,3-glucan synthase FKS1.
Nature, 616, 2023
5YWO
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BU of 5ywo by Molmil
Structure of JEV-2F2 Fab complex
Descriptor: 2F2 heavy chain, 2F2 light chain, JEV E protein, ...
Authors:Qiu, X, Lei, Y.F, Yang, P, Gao, Q, Wang, N, Cao, L, Yuan, S, Wang, X, Xu, Z.K, Rao, Z.
Deposit date:2017-11-29
Release date:2018-03-21
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
5YWF
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BU of 5ywf by Molmil
Crystal structure of 2H4 Fab
Descriptor: 2H4 heavy chain, 2H4 light chain
Authors:Qiu, X, Lei, Y, Yang, P, Gao, Q, Wang, N, Cao, L, Wang, X, Xu, Z.K, Rao, Z.
Deposit date:2017-11-29
Release date:2018-03-21
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
5YWP
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BU of 5ywp by Molmil
JEV-2H4 Fab complex
Descriptor: 2H4 heavy chain, 2H4 light chain, JEV E protein, ...
Authors:Qiu, X.D, Lei, Y.F, Yang, P, Gao, Q, WANG, N, Cao, L, Yuan, S, Wang, X.X, Xu, Z.K, Rao, Z.H.
Deposit date:2017-11-29
Release date:2018-05-02
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
5XBM
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BU of 5xbm by Molmil
Structure of SCARB2-JL2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosome membrane protein 2, ...
Authors:Zhang, X, Yang, P, Wang, N, Zhang, J, Li, J, Guo, H, Yin, X, Rao, Z, Wang, X, Zhang, L.
Deposit date:2017-03-20
Release date:2018-06-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:The binding of a monoclonal antibody to the apical region of SCARB2 blocks EV71 infection.
Protein Cell, 8, 2017
5X45
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BU of 5x45 by Molmil
Crystal structure of 2A protease from Human rhinovirus C15
Descriptor: ZINC ION, protease 2A
Authors:Ling, H, Yang, P, Shaw, N, Sun, Y, Wang, X.
Deposit date:2017-02-10
Release date:2018-02-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structural view of the 2A protease from human rhinovirus C15.
Acta Crystallogr.,Sect.F, 74, 2018
7EJV
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BU of 7ejv by Molmil
The co-crystal structure of DYRK2 with YK-2-69
Descriptor: Dual specificity tyrosine-phosphorylation-regulated kinase 2, [6-[[4-[2-(dimethylamino)-1,3-benzothiazol-6-yl]-5-fluoranyl-pyrimidin-2-yl]amino]pyridin-3-yl]-(4-ethylpiperazin-1-yl)methanone
Authors:Li, Z, Xiao, Y, Yuan, K, Kuang, W, Xiuquan, Y, Yang, P.
Deposit date:2021-04-02
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Targeting dual-specificity tyrosine phosphorylation-regulated kinase 2 with a highly selective inhibitor for the treatment of prostate cancer.
Nat Commun, 13, 2022
7VUN
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BU of 7vun by Molmil
Design, modification, evaluation and cocrystal studies of novel phthalimides regulating PD-1/PD-L1 interaction
Descriptor: (2~{S},3~{S})-2-[[6-[(3-cyanophenyl)methoxy]-2-(2-methyl-3-phenyl-phenyl)-1,3-bis(oxidanylidene)isoindol-5-yl]methylamino]-3-oxidanyl-butanoic acid, Programmed cell death 1 ligand 1
Authors:Cheng, Y, Sun, C.L, Chen, M.R, Yang, P, Xiao, Y.B.
Deposit date:2021-11-03
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Novel phthalimides regulating PD-1/PD-L1 interaction as potential immunotherapy agents.
Acta Pharm Sin B, 12, 2022
4ZL1
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BU of 4zl1 by Molmil
Crystal structure of human dihydroorotate dehydrogenase (DHODH) with 18X at 1.86 A resolution
Descriptor: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
Authors:Huang, J, Wu, D, Ouyang, P, Lu, W, Pu, J.
Deposit date:2015-05-01
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of human dihydroorotate dehydrogenase (DHODH) with 18XYW at 1.86 A resolution
To Be Published
4YLW
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BU of 4ylw by Molmil
Crystal structure of human dihydroorotate dehydrogenase (DHODH) with No.33 compound
Descriptor: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
Authors:Wu, D, Ouyang, P, Lu, W, Huang, J.
Deposit date:2015-03-06
Release date:2016-03-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of human dihydroorotate dehydrogenase (DHODH) with No.33 compound
To Be Published
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PDB entries from 2024-10-30

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