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PDB: 352 results

3R4L
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Human very long half life Plasminogen Activator Inhibitor type-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plasminogen activator inhibitor 1, beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yang, J, Zheng, H, Han, Q, Skrzypczak-Jankun, E, Jankun, J.
Deposit date:2011-03-17
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Remarkable extension of PAI-1 half-life surprisingly brings no changes to its structure.
Int.J.Mol.Med., 29, 2012
1RE5
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BU of 1re5 by Molmil
Crystal structure of 3-carboxy-cis,cis-muconate lactonizing enzyme from Pseudomonas putida
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-carboxy-cis,cis-muconate cycloisomerase, CITRIC ACID
Authors:Yang, J, Wang, Y, Woolridge, E.M, Petsko, G.A, Kozarich, J.W, Ringe, D.
Deposit date:2003-11-06
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of 3-Carboxy-cis,cis-muconate Lactonizing Enzyme from Pseudomonas putida, a Fumarase Class II Type Cycloisomerase: Enzyme Evolution in Parallel Pathways.
Biochemistry, 43, 2004
3QAL
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Crystal Structure of Arg280Ala mutant of Catalytic subunit of cAMP-dependent Protein Kinase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein kinase inhibitor, ...
Authors:Yang, J, Wu, J, Steichen, J, Taylor, S.S.
Deposit date:2011-01-11
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A conserved Glu-Arg salt bridge connects coevolved motifs that define the eukaryotic protein kinase fold.
J.Mol.Biol., 415, 2012
1O6L
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BU of 1o6l by Molmil
Crystal structure of an activated Akt/protein kinase B (PKB-PIF chimera) ternary complex with AMP-PNP and GSK3 peptide
Descriptor: GLYCOGEN SYNTHASE KINASE-3 BETA, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Yang, J, Cron, P, Good, V.M, Thompson, V, Hemmings, B.A, Barford, D.
Deposit date:2002-10-08
Release date:2002-11-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of an Activated Akt/Protein Kinase B Ternary Complex with Gsk-3 Peptide and AMP-Pnp
Nat.Struct.Biol., 9, 2002
1O6K
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BU of 1o6k by Molmil
Structure of activated form of PKB kinase domain S474D with GSK3 peptide and AMP-PNP
Descriptor: GLYCOGEN SYNTHASE KINASE-3 BETA, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Yang, J, Cron, P, Good, V.M, Thompson, V, Hemmings, B.A, Barford, D.
Deposit date:2002-10-08
Release date:2002-11-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of an Activated Akt/Protein Kinase B Ternary Complex with Gsk-3 Peptide and AMP-Pnp
Nat.Struct.Biol., 9, 2002
8XRI
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BU of 8xri by Molmil
The crystal structure of AsfvTopII in complex with both G-DNA and T-DNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (56-MER), DNA topoisomerase 2, ...
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:The crystal structure of AsfvTopII in complex with both G-DNA and T-DNA
Nat Commun, 2024
8XRF
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The crystal structure of AsfvTopII in complex with G-DNA
Descriptor: DNA (52-MER), DNA topoisomerase 2, MAGNESIUM ION
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:The crystal structure of AsfvTopII in complex with G-DNA
Nat Commun, 2024
8XRG
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The crystal structure of AsfvTopII ATPase domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2, MAGNESIUM ION, ...
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The crystal structure of AsfvTopII ATPase domain in complex with ADP
Nat Commun, 2024
8XRH
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The crystal structure of AsfvTopII ATPase domain in complex with AMPPNP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA topoisomerase 2, MAGNESIUM ION, ...
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The crystal structure of AsfvTopII ATPase domain in complex with AMPPNP
Nat Commun, 2024
5YOX
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BU of 5yox by Molmil
HD domain-containing protein YGK1(YGL101W)
Descriptor: HD domain-containing protein YGL101W, ZINC ION
Authors:Yang, J, Wang, F, Gao, Z, Zhou, K, Liu, Q.
Deposit date:2017-10-31
Release date:2018-11-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:HD domain-containing protein YGK1(YGL101W)
To Be Published
4NNI
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Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Descriptor: 30S ribosomal protein S1, PYRAZINE-2-CARBOXYLIC ACID
Authors:Yang, J, Liu, Y, Cai, Q, Lin, D.
Deposit date:2013-11-18
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.
Mol.Microbiol., 95, 2015
4NNK
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Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Descriptor: 30S ribosomal protein S1
Authors:Yang, J, Liu, Y, Cai, Q, Lin, D.
Deposit date:2013-11-18
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.
Mol.Microbiol., 95, 2015
4NNG
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BU of 4nng by Molmil
Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Descriptor: 30S ribosomal protein S1
Authors:Yang, J, Liu, Y, Cai, Q, Lin, D.
Deposit date:2013-11-18
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.
Mol.Microbiol., 95, 2015
4NNH
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BU of 4nnh by Molmil
Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Descriptor: 30S ribosomal protein S1
Authors:Yang, J, Liu, Y, Cai, Q, Lin, D.
Deposit date:2013-11-18
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.
Mol.Microbiol., 95, 2015
8IOM
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BU of 8iom by Molmil
Crystal structure of the carboxy-terminal channel-forming domain of Colicin Ib
Descriptor: Colicin 1B
Authors:Yang, J, Hu, N.J.
Deposit date:2023-03-12
Release date:2023-04-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of colicin Ib Channel domain at 3.0 Angstroms resolution
To Be Published
5HM2
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BU of 5hm2 by Molmil
Crystal structure of the 3C protease from South African Territories type 2 foot-and-mouth disease virus
Descriptor: 3C proteinase
Authors:Yang, J, Leen, E.N, Curry, S.
Deposit date:2016-01-15
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the 3C protease from Southern African Territories type 2 foot-and-mouth disease virus.
Peerj, 4, 2016
6LPX
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BU of 6lpx by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with 2-oxoglutarate (2-OG)
Descriptor: 2-OXOGLUTARIC ACID, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LPP
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BU of 6lpp by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with D-2-hydroxyglutarate (D-2-HG)
Descriptor: (2R)-2-hydroxypentanedioic acid, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LPU
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BU of 6lpu by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with L-2-hydroxyglutarate (L-2-HG)
Descriptor: (2S)-2-HYDROXYPENTANEDIOIC ACID, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.923 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LPQ
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BU of 6lpq by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with D-malate (D-MAL)
Descriptor: D-2-hydroxyglutarate dehydrogenase, mitochondrial, D-MALATE, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LPN
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BU of 6lpn by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in apo form
Descriptor: D-2-hydroxyglutarate dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LPT
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Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with D-lactate (D-LAC)
Descriptor: D-2-hydroxyglutarate dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
2JM1
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BU of 2jm1 by Molmil
Structures and chemical shift assignments for the ADD domain of the ATRX protein
Descriptor: Transcriptional regulator ATRX, ZINC ION
Authors:Yang, J, Neuhaus, D.
Deposit date:2006-09-13
Release date:2007-06-26
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural consequences of disease-causing mutations in the ATRX-DNMT3-DNMT3L (ADD) domain of the chromatin-associated protein ATRX.
Proc.Natl.Acad.Sci.USA, 104, 2007
2MWN
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BU of 2mwn by Molmil
Talin-F3 / RIAM N-terminal Peptide complex
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1-interacting protein, Talin-1
Authors:Yang, J, Zhu, L, Zhang, H, Hirbawi, J, Fukuda, K, Dwivedi, P, Liu, J, Byzova, T, Plow, E.F, Wu, J, Qin, J.
Deposit date:2014-11-13
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformational activation of talin by RIAM triggers integrin-mediated cell adhesion.
Nat Commun, 5, 2014
6M6P
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BU of 6m6p by Molmil
Structure of Marine bacterial laminarinase mutant E135A in complex with 1,3-beta-cellotriosyl-glucose
Descriptor: CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose, laminarinase
Authors:Yang, J, Xu, Y, Tanokura, M, Long, L, Miyakawa, T.
Deposit date:2020-03-16
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020

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