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PDB: 126 results

6XXV
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BU of 6xxv by Molmil
Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57
Descriptor: Antibody C57, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Correia, B.E, Pojer, F.
Deposit date:2020-01-28
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.20116425 Å)
Cite:De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
6YWC
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BU of 6ywc by Molmil
De novo designed protein 4E1H_95 in complex with 101F antibody
Descriptor: Antibody 101F, Heavy Chain, light chain, ...
Authors:Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
Deposit date:2020-04-29
Release date:2020-10-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6YWD
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BU of 6ywd by Molmil
De novo designed protein 4H_01 in complex with Mota antibody
Descriptor: Antibody Mota, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
Deposit date:2020-04-29
Release date:2020-10-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
3J17
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BU of 3j17 by Molmil
Structure of a transcribing cypovirus by cryo-electron microscopy
Descriptor: Structural protein VP3, Structural protein VP5, VP1
Authors:Yang, C, Ji, G, Liu, H, Zhang, K, Liu, G, Sun, F, Zhu, P, Cheng, L.
Deposit date:2011-12-25
Release date:2012-04-04
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of a transcribing cypovirus.
Proc.Natl.Acad.Sci.USA, 109, 2012
1TFZ
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BU of 1tfz by Molmil
Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
Descriptor: (1-TERT-BUTYL-5-HYDROXY-1H-PYRAZOL-4-YL)[6-(METHYLSULFONYL)-4'-METHOXY-2-METHYL-1,1'-BIPHENYL-3-YL]METHANONE, 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
Authors:Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
Deposit date:2004-05-27
Release date:2004-08-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
1SQD
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BU of 1sqd by Molmil
Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
Authors:Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
Deposit date:2004-03-18
Release date:2004-08-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
1SQI
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BU of 1sqi by Molmil
Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
Descriptor: (1-TERT-BUTYL-5-HYDROXY-1H-PYRAZOL-4-YL)[6-(METHYLSULFONYL)-4'-METHOXY-2-METHYL-1,1'-BIPHENYL-3-YL]METHANONE, 4-hydroxyphenylpyruvic acid dioxygenase, FE (III) ION
Authors:Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
Deposit date:2004-03-18
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
1TG5
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BU of 1tg5 by Molmil
Crystal structures of plant 4-hydroxyphenylpyruvate dioxygenases complexed with DAS645
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, FE (II) ION, [1-TERT-BUTYL-3-(2,4-DICHLOROPHENYL)-5-HYDROXY-1H-PYRAZOL-4-YL][2-CHLORO-4-(METHYLSULFONYL)PHENYL]METHANONE
Authors:Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
Deposit date:2004-05-28
Release date:2004-08-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
3ULL
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BU of 3ull by Molmil
HUMAN MITOCHONDRIAL SINGLE-STRANDED DNA BINDING PROTEIN
Descriptor: DNA BINDING PROTEIN
Authors:Yang, C, Curth, U, Urbanke, C, Kang, C.
Deposit date:1996-12-11
Release date:1997-10-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution.
Nat.Struct.Biol., 4, 1997
4FKZ
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BU of 4fkz by Molmil
Crystal structure of Bacillus subtilis UDP-GlcNAc 2-epimerase in complex with UDP-GlcNAc and UDP
Descriptor: UDP-N-acetylglucosamine 2-epimerase, URIDINE-5'-DIPHOSPHATE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Yang, C.S, Chen, S.C, Kuan, S.M, Chen, Y.R, Liu, Y.H, Chen, Y.
Deposit date:2012-06-14
Release date:2013-05-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of Bacillus subtilis UDP-GlcNAc 2-epimerase in complex with UDP-GlcNAc and UDP
To be Published
4JOX
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BU of 4jox by Molmil
Crystal structure of cry34Ab1 protein at 2.15 A resolution
Descriptor: 13.6 kDa insecticidal crystal protein
Authors:Yang, C, Pflugrath, J.W, Kelker, M.S, Evan, S.L, Narva, K.E.
Deposit date:2013-03-19
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and biophysical characterization of Cry34Ab1 and Cry35Ab1.
To be Published
4JP0
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BU of 4jp0 by Molmil
Crystal structure of Cry35Ab1
Descriptor: 43.8 kDa insecticidal crystal protein
Authors:Yang, C, Pflugrath, J.W, Kelker, M.S, Evan, S.L, Narva, K.E.
Deposit date:2013-03-19
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biophysical characterization of Cry34Ab1 and Cry35Ab1
To be Published
5Z4Y
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BU of 5z4y by Molmil
Crystal structure of PaCysB NTD domain with space group P4
Descriptor: Cys regulon transcriptional activator, GLYCEROL
Authors:Yang, C, Liang, H, Gan, J.
Deposit date:2018-01-18
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Molecular insights into the master regulator CysB-mediated bacterial virulence in Pseudomonas aeruginosa.
Mol.Microbiol., 111, 2019
4JIS
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BU of 4jis by Molmil
Crystal structure of ribitol 5-phosphate cytidylyltransferase (TarI) from Bacillus subtilis
Descriptor: ribitol-5-phosphate cytidylyltransferase
Authors:Yang, C.S, Chen, S.C, Chen, Y.R, Kuan, S.M, Liu, Y.H, Chen, Y.
Deposit date:2013-03-06
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.772 Å)
Cite:Crystal structure of ribitol 5-phosphate cytidylyltransferase (TarI) from Bacillus subtilis
To be Published
5Z4Z
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BU of 5z4z by Molmil
Crystal structure of PaCysB NTD domain with space group C2
Descriptor: SULFATE ION, Transcriptional regulator CysB
Authors:Yang, C, Liang, H, Gan, J.
Deposit date:2018-01-15
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:Molecular insights into the master regulator CysB-mediated bacterial virulence in Pseudomonas aeruginosa.
Mol.Microbiol., 111, 2019
5Z50
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BU of 5z50 by Molmil
Crystal structure of PaCysB regulatory domain
Descriptor: Cys regulon transcriptional activator, GLYCEROL, SULFATE ION
Authors:Yang, C, Liang, H, Gan, J.
Deposit date:2018-01-15
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Molecular insights into the master regulator CysB-mediated bacterial virulence in Pseudomonas aeruginosa.
Mol.Microbiol., 111, 2019
1YWX
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BU of 1ywx by Molmil
Solution Structure of Methanococcus maripaludis Protein MMP0443: The Northeast Structural Genomics Consortium Target MrR16
Descriptor: 30S ribosomal protein S24e
Authors:Yang, C.S, Acton, T, Shen, Y, Ma, L, Liu, G, Xiao, R, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-02-18
Release date:2005-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of Methanococcus maripaludis Protein MMP0443: The Northeast Structural Genomics Consortium Target MrR16
To be Published
5ZF2
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BU of 5zf2 by Molmil
Crystal structure of Trxlp from Edwardsiella tarda EIB202
Descriptor: SULFATE ION, Thioredoxin (H-type,TRX-H)
Authors:Yang, C, Quan, S.
Deposit date:2018-03-02
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The Edwardsiella piscicida thioredoxin-like protein inhibits ASK1-MAPKs signaling cascades to promote pathogenesis during infection.
Plos Pathog., 15, 2019
7AYE
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BU of 7aye by Molmil
Crystal structure of the computationally designed chemically disruptable heterodimer LD6-MDM2
Descriptor: Isoform 11 of E3 ubiquitin-protein ligase Mdm2, Thiol:disulfide interchange protein DsbD
Authors:Yang, C, Lau, K, Pojer, F, Correia, B.E.
Deposit date:2020-11-12
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A rational blueprint for the design of chemically-controlled protein switches.
Nat Commun, 12, 2021
7CKK
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BU of 7ckk by Molmil
Structural complex of FTO bound with Dac51
Descriptor: 2-{[2,6-dichloro-4-(3,5-dimethyl-1H-pyrazol-4-yl)phenyl]amino}-N-hydroxybenzamide, Alpha-ketoglutarate-dependent dioxygenase FTO, N-OXALYLGLYCINE
Authors:Yang, C, Gan, J.
Deposit date:2020-07-17
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Tumors exploit FTO-mediated regulation of glycolytic metabolism to evade immune surveillance.
Cell Metab., 33, 2021
5WYO
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BU of 5wyo by Molmil
Solution structure of E.coli HdeA
Descriptor: Acid stress chaperone HdeA
Authors:Yang, C, Hu, Y, Jin, C.
Deposit date:2017-01-14
Release date:2017-11-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress
Biochemistry, 56, 2017
5ZYT
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BU of 5zyt by Molmil
Crystal structure of human MGME1 with 3' overhang double strand DNA3
Descriptor: DNA (5'-D(P*CP*TP*TP*CP*TP*TP*CP*C)-3'), Mitochondrial genome maintenance exonuclease 1
Authors:Yang, C, Gan, J.
Deposit date:2018-05-28
Release date:2018-09-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Structural insights into DNA degradation by human mitochondrial nuclease MGME1
Nucleic Acids Res., 46, 2018
5ZYU
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BU of 5zyu by Molmil
The crystal structure of humanMGME1 with single strand DNA2
Descriptor: DNA (5'-D(P*CP*AP*AP*CP*AP*AP*CP*A)-3'), GLYCEROL, Mitochondrial genome maintenance exonuclease 1
Authors:Yang, C, Gan, J.
Deposit date:2018-05-28
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structural insights into DNA degradation by human mitochondrial nuclease MGME1
Nucleic Acids Res., 46, 2018
5ZYV
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BU of 5zyv by Molmil
Crystal structure of human MGME1 with single strand DNA2 and Ca2+
Descriptor: ACETATE ION, CALCIUM ION, DNA (5'-D(P*CP*AP*AP*CP*AP*AP*T)-3'), ...
Authors:Yang, C, Gan, J.
Deposit date:2018-05-28
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structural insights into DNA degradation by human mitochondrial nuclease MGME1
Nucleic Acids Res., 46, 2018
5ZYW
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BU of 5zyw by Molmil
The crystal structure of apo-HsMGME1 with Mn2+
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, MANGANESE (II) ION, ...
Authors:Yang, C, Gan, J.
Deposit date:2018-05-28
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into DNA degradation by human mitochondrial nuclease MGME1
Nucleic Acids Res., 46, 2018

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数据于2024-07-17公开中

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