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PDB: 603 results

5XBZ
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BU of 5xbz by Molmil
Crystal structure of GH family 81 beta-1,3-glucanase from Rhizomucr miehei complexed with laminaripentaose
Descriptor: Endo-beta-1,3-glucanase, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, ...
Authors:Yang, S, Qin, Z, Zhou, P, Yan, Q, Jiang, Z.
Deposit date:2017-03-21
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic mechanism of glycoside hydrolase family 81 beta-1,3-glucanase
To Be Published
5Z9S
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BU of 5z9s by Molmil
Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria
Descriptor: Glycosyl hydrolase family 3 protein, beta-D-glucopyranose
Authors:Yan, S, Wei, P.C, Li, J.R.
Deposit date:2018-02-05
Release date:2018-03-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria.
Biochem. Biophys. Res. Commun., 496, 2018
2MPX
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BU of 2mpx by Molmil
Three-dimensional structure of CAP-GLY DOMAIN ASSEMBLED ON MICROTUBULES DETERMINED BY MAS NMR SPECTROSCOPY
Descriptor: Dynactin subunit 1
Authors:Yan, S, Hou, G, Zhang, H, Polenova, T, Williams, J.C.
Deposit date:2014-06-08
Release date:2015-11-11
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:THREE-DIMENSIONAL STRUCTURE of CAP-GLY DOMAIN ASSEMBLED ON MICROTUBULES DETERMINED BY MAS NMR SPECTROSCOPY
To be Published
2IJN
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BU of 2ijn by Molmil
Isothiazoles as active-site inhibitors of HCV NS5B polymerase
Descriptor: (2R,3R)-3-{[3,5-BIS(TRIFLUOROMETHYL)PHENYL]AMINO}-2-CYANO-3-THIOXOPROPANAMIDE, RNA polymerase NS5B
Authors:Yan, S, Yao, N.
Deposit date:2006-09-29
Release date:2006-11-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isothiazoles as active-site inhibitors of HCV NS5B polymerase
Bioorg.Med.Chem.Lett., 17, 2007
2M02
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BU of 2m02 by Molmil
3D structure of cap-gly domain of mammalian dynactin determined by magic angle spinning NMR spectroscopy
Descriptor: Dynactin subunit 1
Authors:Yan, S, Hou, G, Schwieters, C.D, Ahmed, S, Williams, J.C, Polenova, T.
Deposit date:2012-10-15
Release date:2013-05-08
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Three-Dimensional Structure of CAP-Gly Domain of Mammalian Dynactin Determined by Magic Angle Spinning NMR Spectroscopy: Conformational Plasticity and Interactions with End-Binding Protein EB1.
J.Mol.Biol., 425, 2013
3E8N
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BU of 3e8n by Molmil
X-ray structure of the human mitogen-activated protein kinase kinase 1 (MEK1) complexed with a potent inhibitor RDEA119 and MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, ...
Authors:Yan, S, Wang, Z.M.
Deposit date:2008-08-20
Release date:2009-09-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:RDEA119/BAY 869766: a potent, selective, allosteric inhibitor of MEK1/2 for the treatment of cancer.
Cancer Res., 69, 2009
6LIG
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BU of 6lig by Molmil
Crystal structure of human Glutamate oxaloacetate transaminase 1 (GOT1) in complex with AH
Descriptor: 3-[3-(3-methylbut-2-enyl)-4-oxidanyl-phenyl]-5-[[3-(3-methylbut-2-enyl)-4-oxidanyl-phenyl]methylidene]-4-oxidanyl-furan-2-one, Glutamate oxaloacetate transaminase 1, PYRIDOXAL-5'-PHOSPHATE
Authors:Yan, S, Sun, W.G, Zhang, Y.H.
Deposit date:2019-12-10
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of human Glutamate oxaloacetate transaminase 1 (GOT1) in complex with AH
To Be Published
4JL3
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BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
Descriptor: DNA (31-MER), Transcriptional regulator, TetR family
Authors:Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
Deposit date:2013-03-12
Release date:2013-06-26
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
2KAP
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BU of 2kap by Molmil
Solution structure of DLC1-SAM
Descriptor: Rho GTPase-activating protein 7
Authors:Yang, S, Yang, D.
Deposit date:2008-11-12
Release date:2009-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Characterization of DLC1-SAM equilibrium unfolding at the amino acid residue level
Biochemistry, 48, 2009
2GYT
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BU of 2gyt by Molmil
Solution structure of the SAM (sterile alpha motif) domain of DLC1 (deleted in liver cancer 1)
Descriptor: Deleted in liver cancer 1 protein, isoform 2
Authors:Yang, S.
Deposit date:2006-05-10
Release date:2007-04-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The SAM domain of the RhoGAP DLC1 binds EF1A1 to regulate cell migration
J.Cell.Sci., 122, 2009
4JKZ
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BU of 4jkz by Molmil
Crystal structure of ms6564 from mycobacterium smegmatis
Descriptor: Transcriptional regulator, TetR family
Authors:Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
Deposit date:2013-03-12
Release date:2013-06-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
2KET
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BU of 2ket by Molmil
solution structure of BMAP-27
Descriptor: Cathelicidin-6
Authors:Yang, S, Jung, H, Kim, J.
Deposit date:2009-02-03
Release date:2009-08-04
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:solution structure of BMAP-27
To be Published
6VNW
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BU of 6vnw by Molmil
Cryo-EM structure of apo-BBSome
Descriptor: BBS1 domain-containing protein, Bardet-Biedl syndrome 18 protein, Bardet-Biedl syndrome 2 protein homolog, ...
Authors:Yang, S, Walz, T, Nachury, M, Chou, H.
Deposit date:2020-01-29
Release date:2020-07-01
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Near-atomic structures of the BBSome reveal the basis for BBSome activation and binding to GPCR cargoes.
Elife, 9, 2020
6VOA
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BU of 6voa by Molmil
Cryo-EM structure of the BBSome-ARL6 complex
Descriptor: ADP-ribosylation factor-like protein 6, BBS1 domain-containing protein, Bardet-Biedl syndrome 18 protein, ...
Authors:Yang, S, Walz, T, Nachury, M.V.
Deposit date:2020-01-30
Release date:2020-06-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Near-atomic structures of the BBSome reveal the basis for BBSome activation and binding to GPCR cargoes.
Elife, 9, 2020
3UI7
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BU of 3ui7 by Molmil
Discovery of orally active pyrazoloquinoline as a potent PDE10 inhibitor for the management of schizophrenia
Descriptor: 6-methoxy-3,8-dimethyl-4-(morpholin-4-ylmethyl)-1H-pyrazolo[3,4-b]quinoline, MAGNESIUM ION, ZINC ION, ...
Authors:Yang, S, Smotryski, J, Mcelroy, W, Ho, G, Tulshian, D, Greenlee, W.J, Hodgson, R, Xiao, L, Hruza, A.
Deposit date:2011-11-04
Release date:2011-12-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Discovery of orally active pyrazoloquinolines as potent PDE10 inhibitors for the management of schizophrenia.
Bioorg.Med.Chem.Lett., 22, 2012
5XTY
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BU of 5xty by Molmil
Crystal Structure of 11S allergen from Cocos nucifera L.
Descriptor: 11S globulin isoform 1
Authors:Vajravijayan, S, Nandhagopal, N, Gunasekaran, K.
Deposit date:2017-06-21
Release date:2018-06-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure determination and analysis of 11S coconut allergen: Cocosin
Mol. Immunol., 92, 2017
5JJY
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BU of 5jjy by Molmil
Crystal structure of SETD2 bound to histone H3.3 K36M peptide
Descriptor: Histone H3.3, Histone-lysine N-methyltransferase SETD2, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Yang, S, Zheng, X, Li, H.
Deposit date:2016-04-25
Release date:2016-11-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:Molecular basis for oncohistone H3 recognition by SETD2 methyltransferase
Genes Dev., 30, 2016
3L43
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BU of 3l43 by Molmil
Crystal structure of the dynamin 3 GTPase domain bound with GDP
Descriptor: Dynamin-3, GUANOSINE-5'-DIPHOSPHATE, UNKNOWN ATOM OR ION
Authors:Yang, S, Tempel, W, Tong, Y, Nedyalkova, L, Guan, X, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-12-18
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of the dynamin 3 GTPase domain bound with GDP
to be published
4EF4
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BU of 4ef4 by Molmil
Crystal structure of STING CTD complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, Transmembrane protein 173
Authors:Ouyang, S, Ru, H, Shaw, N, Jiang, Y, Niu, F, Zhu, Y, Qiu, W, Li, Y, Liu, Z.-J.
Deposit date:2012-03-29
Release date:2012-05-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structural analysis of the STING adaptor protein reveals a hydrophobic dimer interface and mode of cyclic di-GMP binding
Immunity, 36, 2012
7SD3
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BU of 7sd3 by Molmil
Cytoplasmic tail deleted HIV-1 Env bound with three 4E10 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4E10 Fab heavy chain, ...
Authors:Yang, S, Walz, T.
Deposit date:2021-09-29
Release date:2022-11-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Dynamic HIV-1 spike motion creates vulnerability for its membrane-bound tripod to antibody attack.
Nat Commun, 13, 2022
4GOV
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BU of 4gov by Molmil
The crystal structure of human fascin 1 S39D mutant
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BROMIDE ION, CHLORIDE ION, ...
Authors:Yang, S.Y, Huang, F.K, Huang, J, Chen, S, Jakoncic, J, Leo-Macias, A, Diaz-Avalos, R, Chen, L, Zhang, J.J, Huang, X.Y.
Deposit date:2012-08-20
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular mechanism of fascin function in filopodial formation.
J.Biol.Chem., 288, 2013
1I92
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BU of 1i92 by Molmil
STRUCTURAL BASIS OF THE NHERF PDZ1-CFTR INTERACTION
Descriptor: CHLORIDE ION, NA+/H+ EXCHANGE REGULATORY CO-FACTOR
Authors:Karthikeyan, S, Leung, T, Ladias, J.A.A.
Deposit date:2001-03-16
Release date:2001-06-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of the Na+/H+ exchanger regulatory factor PDZ1 interaction with the carboxyl-terminal region of the cystic fibrosis transmembrane conductance regulator.
J.Biol.Chem., 276, 2001
7SC5
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BU of 7sc5 by Molmil
Cytoplasmic tail deleted HIV Env trimer in nanodisc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Yang, S, Walz, T.
Deposit date:2021-09-27
Release date:2022-11-09
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Dynamic HIV-1 spike motion creates vulnerability for its membrane-bound tripod to antibody attack.
Nat Commun, 13, 2022
4GOY
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BU of 4goy by Molmil
The crystal structure of human fascin 1 K41A mutant
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BROMIDE ION, CHLORIDE ION, ...
Authors:Yang, S.Y, Huang, F.K, Huang, J, Chen, S, Jakoncic, J, Leo-Macias, A, Diaz-Avalos, R, Chen, L, Zhang, J.J, Huang, X.Y.
Deposit date:2012-08-20
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular mechanism of fascin function in filopodial formation.
J.Biol.Chem., 288, 2013
4GP0
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BU of 4gp0 by Molmil
The crystal structure of human fascin 1 R149A K150A R151A mutant
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BROMIDE ION, ...
Authors:Yang, S.Y, Huang, F.K, Huang, J, Chen, S, Jakoncic, J, Leo-Macias, A, Diaz-Avalos, R, Chen, L, Zhang, J.J, Huang, X.Y.
Deposit date:2012-08-20
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism of fascin function in filopodial formation.
J.Biol.Chem., 288, 2013

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