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PDB: 76 results

1P2F
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BU of 1p2f by Molmil
Crystal Structure Analysis of Response Regulator DrrB, a Thermotoga maritima OmpR/PhoB Homolog
Descriptor: Response Regulator
Authors:Robinson, V.L, Wu, T, Stock, A.M.
Deposit date:2003-04-15
Release date:2003-04-29
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the domain interface in DrrB, a response regulator of the OmpR/PhoB subfamily
J.Bacteriol., 185, 2003
4H86
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BU of 4h86 by Molmil
Crystal structure of Ahp1 from Saccharomyces cerevisiae in reduced form
Descriptor: Peroxiredoxin type-2
Authors:Liu, M, Wang, F, Qiu, R, Wu, T, Gu, S, Tang, R, Ji, C.
Deposit date:2012-09-21
Release date:2012-10-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal structure of Ahp1 from Saccharomyces cerevisiae in reduced form
To be Published
4GXP
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BU of 4gxp by Molmil
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA
Descriptor: Beta-glucosidase Chimeric protein
Authors:Smith, M.A, Romero, P.A, Wu, T, Brustad, E.M, Arnold, F.H.
Deposit date:2012-09-04
Release date:2013-01-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Chimeragenesis of distantly-related proteins by noncontiguous recombination.
Protein Sci., 22, 2013
8GYT
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BU of 8gyt by Molmil
Cryo-EM structure of human Pannexin-3 R36S/F40R variant in pre-open state.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pannexin-3
Authors:Cong, Y, Jin, X, Kong, F, Wu, T, Yan, C.
Deposit date:2022-09-23
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
2PK4
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BU of 2pk4 by Molmil
THE REFINED STRUCTURE OF THE EPSILON-AMINOCAPROIC ACID COMPLEX OF HUMAN PLASMINOGEN KRINGLE
Descriptor: 6-AMINOHEXANOIC ACID, HUMAN PLASMINOGEN KRINGLE 4
Authors:Tulinsky, A, Wu, T.-P.
Deposit date:1991-07-18
Release date:1993-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The refined structure of the epsilon-aminocaproic acid complex of human plasminogen kringle 4.
Biochemistry, 30, 1991
8I78
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BU of 8i78 by Molmil
Meso-Diaminopimelate dehydrogenase
Descriptor: Meso-diaminopimelate D-dehydrogenase
Authors:Wei, S, Wu, T.F.
Deposit date:2023-01-31
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Analysis of the catalytic mechanism of meso-DAPDH and extension of D-aromatic amino acid substrate scope
To Be Published
5V9U
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BU of 5v9u by Molmil
Crystal Structure of small molecule ARS-1620 covalently bound to K-Ras G12C
Descriptor: (S)-1-{4-[6-chloro-8-fluoro-7-(2-fluoro-6-hydroxyphenyl)quinazolin-4-yl] piperazin-1-yl}propan-1-one, CALCIUM ION, GLYCEROL, ...
Authors:Janes, M.R, Zhang, J, Li, L.-S, Hansen, R, Peters, U, Guo, X, Chen, Y, Babbar, A, Firdaus, S.J, Feng, J, Chen, J.H, Li, S, Brehmer, D, Darjania, L, Li, S, Long, Y.O, Thach, C, Liu, Y, Zarieh, A, Ely, T, Kucharski, J.M, Kessler, L.V, Wu, T, Wang, Y, Yao, Y, Deng, X, Zarrinkar, P, Dashyant, D, Lorenzi, M.V, Hu-Lowe, D, Patricelli, M.P, Ren, P, Liu, Y.
Deposit date:2017-03-23
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor.
Cell, 172, 2018
3BS1
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BU of 3bs1 by Molmil
Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with a Novel Mode of Binding
Descriptor: Accessory gene regulator protein A, DNA (5'-D(*DAP*DAP*(BRU)P*DAP*DCP*DTP*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DTP*DAP*DA)-3'), DNA (5'-D(*DTP*DTP*DTP*DAP*DAP*DCP*DAP*DGP*DTP*DTP*DAP*DAP*DGP*(BRU)P*DAP*DT)-3'), ...
Authors:Sidote, D.J, Barbieri, C, Wu, T, Stock, A.M.
Deposit date:2007-12-21
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with an Unusual Mode of Binding.
Structure, 16, 2008
1C72
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TYR115, GLN165 AND TRP209 CONTRIBUTE TO THE 1,2-EPOXY-3-(P-NITROPHENOXY)PROPANE CONJUGATING ACTIVITIES OF GLUTATHIONE S-TRANSFERASE CGSTM1-1
Descriptor: 1-HYDROXY-2-S-GLUTATHIONYL-3-PARA-NITROPHENOXY-PROPANE, PROTEIN (GLUTATHIONE S-TRANSFERASE)
Authors:Chern, M.K, Wu, T.C, Hsieh, C.H, Chou, C.C, Liu, L.F, Kuan, I.C, Yeh, Y.H, Hsiao, C.D, Tam, M.F.
Deposit date:2000-02-02
Release date:2000-08-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Tyr115, gln165 and trp209 contribute to the 1, 2-epoxy-3-(p-nitrophenoxy)propane-conjugating activity of glutathione S-transferase cGSTM1-1.
J.Mol.Biol., 300, 2000
3WP5
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BU of 3wp5 by Molmil
The crystal structure of mutant CDBFV E109A from Neocallimastix patriciarum
Descriptor: CDBFV
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
3WP4
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The crystal structure of native CDBFV from Neocallimastix patriciarum
Descriptor: CDBFV, SULFATE ION
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
3WP6
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BU of 3wp6 by Molmil
The complex structure of CDBFV E109A with xylotriose
Descriptor: CDBFV, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
7EVJ
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BU of 7evj by Molmil
Crystal structure of CBP bromodomain liganded with 9c
Descriptor: 3-acetyl-1-((3-(1-cyclopropyl-1H-pyrazol-4-yl)-2-fluoro-5-(hydroxymethyl)phenyl)carbamoyl)indolizin-7-yl dimethylcarbamate, CREB-binding protein, GLYCEROL, ...
Authors:Xiang, Q, Wang, C, Wu, T, Zhang, Y, Zhang, C, Luo, G, Wu, X, Shen, H, Xu, Y.
Deposit date:2021-05-21
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Design, Synthesis, and Biological Evaluation of 1-(Indolizin-3-yl)ethan-1-ones as CBP Bromodomain Inhibitors for the Treatment of Prostate Cancer.
J.Med.Chem., 65, 2022
4JKD
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BU of 4jkd by Molmil
Open and closed forms of I1790Y human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKE
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BU of 4jke by Molmil
Open and closed forms of T1789P human PRP8 RNase H-like domain with bound Mg ion
Descriptor: MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKA
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BU of 4jka by Molmil
Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Co ion
Descriptor: CHLORIDE ION, COBALT (II) ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
7XIJ
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BU of 7xij by Molmil
Crystal structure of CBP bromodomain liganded with Y08175
Descriptor: 3-[(1-ethanoyl-5-methoxy-indol-3-yl)carbonylamino]-4-fluoranyl-5-(1-methylpyrazol-4-yl)benzoic acid, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Xiang, Q, Wang, C, Wu, T, Zhang, Y, Zhang, C, Luo, G, Wu, X, Shen, H, Xu, Y.
Deposit date:2022-04-13
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of CBP bromodomain liganded with Y08175
To Be Published
7XNE
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Crystal structure of CBP bromodomain liganded with Y08284
Descriptor: CREB-binding protein, GLYCEROL, N-[3-(1-cyclopropylpyrazol-4-yl)-2-fluoranyl-5-[(1S)-1-oxidanylethyl]phenyl]-3-ethanoyl-7-methoxy-indolizine-1-carboxamide
Authors:Xiang, Q, Wang, C, Wu, T, Zhang, C, Hu, Q, Luo, G, Hu, J, Zhuang, X, Zou, L, Shen, H, Wu, X, Zhang, Y, Kong, X, Xu, Y.
Deposit date:2022-04-28
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Design, Synthesis, and Biological Evaluation of 1-(Indolizin-3-yl)ethan-1-ones as CBP Bromodomain Inhibitors for the Treatment of Prostate Cancer.
J.Med.Chem., 65, 2022
4JKG
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BU of 4jkg by Molmil
Open and closed forms of mixed T1789P+R1865A and R1865A human PRP8 RNase H-like domain with bound Mg ion
Descriptor: MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKC
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BU of 4jkc by Molmil
Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JK7
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BU of 4jk7 by Molmil
Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKB
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BU of 4jkb by Molmil
Open and closed forms of V1788D human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JK9
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BU of 4jk9 by Molmil
Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Co ion
Descriptor: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKH
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BU of 4jkh by Molmil
Open and closed forms of D1781E human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JK8
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BU of 4jk8 by Molmil
Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013

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