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PDB: 374 results

1WHI
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RIBOSOMAL PROTEIN L14
Descriptor: RIBOSOMAL PROTEIN L14
Authors:Davies, C, White, S.W, Ramakrishnan, V.
Deposit date:1996-01-10
Release date:1996-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.
Structure, 4, 1996
1G5X
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BU of 1g5x by Molmil
The Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase I
Descriptor: BETA-KETOACYL ACYL CARRIER PROTEIN SYNTHASE I
Authors:Zhang, Y.M, Rao, M.S, Heath, R.J, Price, A.C, Olson, A.J, Rock, C.O, White, S.W.
Deposit date:2000-11-02
Release date:2000-11-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Identification and analysis of the acyl carrier protein (ACP) docking site on beta-ketoacyl-ACP synthase III.
J.Biol.Chem., 276, 2001
7NB9
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E. coli NfsA with nitrofurantoin
Descriptor: 1-[(~{E})-(5-nitrofuran-2-yl)methylideneamino]imidazolidine-2,4-dione, DIMETHYL SULFOXIDE, FLAVIN MONONUCLEOTIDE, ...
Authors:Day, M.D, Jarrom, D, Grainger, A.I, Parr, R.J, Hyde, E.I, White, S.A.
Deposit date:2021-01-25
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
7NNX
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E. coli NfsA with 1,4-benzoquinone
Descriptor: 1,2-ETHANEDIOL, 1,4-benzoquinone, CHLORIDE ION, ...
Authors:Day, M.D, Jarrom, D, Hyde, E.I, White, S.A.
Deposit date:2021-02-25
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
7NMP
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BU of 7nmp by Molmil
E. coli NfsA with hydroquinone
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Day, M.D, Jarrom, D, Parr, R.J, Hyde, E.I, White, S.A.
Deposit date:2021-02-23
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
1YKI
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BU of 1yki by Molmil
The structure of E. coli nitroreductase bound with the antibiotic nitrofurazone
Descriptor: CITRIC ACID, DIMETHYL SULFOXIDE, FLAVIN MONONUCLEOTIDE, ...
Authors:Race, P.R, Lovering, A.L, Green, R.M, Ossor, A, White, S.A, Searle, P.F, Wrighton, C.J, Hyde, E.I.
Deposit date:2005-01-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and mechanistic studies of Escherichia coli nitroreductase with the antibiotic nitrofurazone. Reversed binding orientations in different redox states of the enzyme.
J.Biol.Chem., 280, 2005
1F8G
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BU of 1f8g by Molmil
THE X-RAY STRUCTURE OF NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE FROM RHODOSPIRILLUM RUBRUM COMPLEXED WITH NAD+
Descriptor: NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Buckley, P.A, Baz Jackson, J, Schneider, T, White, S.A, Rice, D.W, Baker, P.J.
Deposit date:2000-06-30
Release date:2001-06-30
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein-protein recognition, hydride transfer and proton pumping in the transhydrogenase complex.
Structure Fold.Des., 8, 2000
4YWO
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Mercuric reductase from Metallosphaera sedula
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Mercuric reductase
Authors:Artz, J.H, Zadvornyy, O.A, White, S, Peters, J.W.
Deposit date:2015-03-20
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Biochemical and Structural Properties of a Thermostable Mercuric Ion Reductase from Metallosphaera sedula.
Front Bioeng Biotechnol, 3, 2015
7NIY
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BU of 7niy by Molmil
E. coli NfsA with FMN
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Day, M.D, Jarrom, D, Hyde, E.I, White, S.A.
Deposit date:2021-02-14
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
6W6B
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BU of 6w6b by Molmil
The X-ray crystal structure of the C-terminus domain of Staphylococcus aureus Fatty Acid Kinase A (FakA, residues 328-548) protein to 1.40 Angstrom resolution
Descriptor: SULFATE ION, SaFakA-Cterminus domain
Authors:Cuypers, M.G, Subramanian, C, Rock, C.O, White, S.W.
Deposit date:2020-03-16
Release date:2021-03-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The X-ray crystal structure of the C-terminus domain of Staphylococcus aureus Fatty Acid Kinase A (FakA, residues 328-548) protein to 1.40 Angstrom resolution
To Be Published
6W7A
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BU of 6w7a by Molmil
The crystal structure of the 2009/H1N1/California PA endonuclease mutant E119D bound to DNA oligomer TAGCAT (uncleaved, 5mM overnight DNA soak)
Descriptor: DNA (5'-D(P*TP*AP*GP*CP*AP*T)-3'), GLYCEROL, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Kumar, G, Webb, T, White, S.W.
Deposit date:2020-03-18
Release date:2021-02-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural insights into the substrate specificity of the endonuclease activity of the influenza virus cap-snatching mechanism.
Nucleic Acids Res., 49, 2021
6WHM
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BU of 6whm by Molmil
The crystal structure of the 2009/H1N1/California PA endonuclease wild type bound to DNA oligomer TAGC (cleaved TTAGCATT, 5mM overnight DNA soak)
Descriptor: DNA (5'-D(P*TP*AP*GP*C)-3'), GLYCEROL, MAGNESIUM ION, ...
Authors:Cuypers, M.G, Kumar, G, Webb, T, White, S.W.
Deposit date:2020-04-08
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural insights into the substrate specificity of the endonuclease activity of the influenza virus cap-snatching mechanism.
Nucleic Acids Res., 49, 2021
6WS3
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BU of 6ws3 by Molmil
The crystal structure of the 2009/H1N1/California PA endonuclease wild type bound to DNA oligomers TG and AGCA (from cleaved GTGAGCAGTG)
Descriptor: DNA (5'-D(P*TP*G)-3'), GLYCEROL, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Kumar, G, Webb, T, White, S.W.
Deposit date:2020-04-30
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the substrate specificity of the endonuclease activity of the influenza virus cap-snatching mechanism.
Nucleic Acids Res., 49, 2021
6PC4
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BU of 6pc4 by Molmil
Tubulin-RB3_SLD-TTL in complex with compound ABI-274
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-06-15
Release date:2020-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structure-Activity Relationship Study of Novel 6-Aryl-2-benzoyl-pyridines as Tubulin Polymerization Inhibitors with Potent Antiproliferative Properties.
J.Med.Chem., 63, 2020
5KYM
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BU of 5kym by Molmil
Crystal Structure of the 1-acyl-sn-glycerophosphate (LPA) acyltransferase, PlsC, from Thermotoga maritima
Descriptor: 1-HEPTADECANOYL-2-TRIDECANOYL-3-GLYCEROL-PHOSPHONYL CHOLINE, 1-acyl-sn-glycerol-3-phosphate acyltransferase, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Robertson, R.M, Yao, J, Gajewski, S, Kumar, G, Martin, E.W, Rock, C.O, White, S.W.
Deposit date:2016-07-21
Release date:2017-07-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A two-helix motif positions the lysophosphatidic acid acyltransferase active site for catalysis within the membrane bilayer.
Nat. Struct. Mol. Biol., 24, 2017
6NYU
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BU of 6nyu by Molmil
The X-ray crystal structure of Staphylococcus aureus Fatty Acid Kinase (Fak) B1 F263T mutant protein to 2.18 Angstrom resolution
Descriptor: DegV domain-containing protein, GLYCEROL, MYRISTIC ACID, ...
Authors:Cuypers, M.G, Gullett, J.M, Subramanian, C, White, S.W, Rock, C.O.
Deposit date:2019-02-12
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.183 Å)
Cite:The X-ray crystal structure of STAPHYLOCOCCUS AUREUS Fatty Acid Kinase (Fak) B1 protein F263T mutant to 2.18 Angstrom resolution
To Be Published
6NR1
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BU of 6nr1 by Molmil
The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with Vaccenic acid (C18:1 delta11) to 2.1 Angstrom resolution
Descriptor: Fatty Acid Kinase (Fak) B2 protein (SPR1019), GLYCEROL, VACCENIC ACID
Authors:Cuypers, M.G, Gullett, J.M, Subramanian, C, White, S.W, Rock, C.O.
Deposit date:2019-01-22
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with Vaccenic acid (C18:1 delta11) to 2.1 Angstrom resolution
To Be Published
4HNJ
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BU of 4hnj by Molmil
Crystallographic structure of BCL-xL domain-swapped dimer in complex with PUMA BH3 peptide at 2.9A resolution
Descriptor: Bcl-2-binding component 3, Bcl-2-like protein 1
Authors:Fisher, J.C, Yun, M.K, White, S.W.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:PUMA binding induces partial unfolding within BCL-xL to disrupt p53 binding and promote apoptosis.
Nat.Chem.Biol., 9, 2013
5W9G
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BU of 5w9g by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9k (SRI-30023)
Descriptor: 2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-(2-phenoxyethyl)-1,6-dihydropyrimidine-4 -carboxamide, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Kumar, G, White, S.
Deposit date:2017-06-23
Release date:2017-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease.
Sci Rep, 7, 2017
5CGV
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BU of 5cgv by Molmil
2009 H1N1 PA endonuclease in complex with L-742,001
Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, GLYCEROL, MANGANESE (II) ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2015-07-09
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
1YLU
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BU of 1ylu by Molmil
The structure of E. coli nitroreductase with bound acetate, crystal form 2
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Race, P.R, Lovering, A.L, Green, R.M, Ossor, A, White, S.A, Searle, P.F, Wrighton, C.J, Hyde, E.I.
Deposit date:2005-01-19
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mechanistic studies of Escherichia coli nitroreductase with the antibiotic nitrofurazone. Reversed binding orientations in different redox states of the enzyme.
J.Biol.Chem., 280, 2005
1YLR
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BU of 1ylr by Molmil
The structure of E.coli nitroreductase with bound acetate, crystal form 1
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Race, P.R, Lovering, A.L, Green, R.M, Ossor, A, White, S.A, Searle, P.F, Wrighton, C.J, Hyde, E.I.
Deposit date:2005-01-19
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and mechanistic studies of Escherichia coli nitroreductase with the antibiotic nitrofurazone. Reversed binding orientations in different redox states of the enzyme.
J.Biol.Chem., 280, 2005
6BR1
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BU of 6br1 by Molmil
Tubulin-RB3_SLD-TTL in complex with heterocyclic pyrimidine compound 4a
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-chloro-4-(6-methoxy-3,4-dihydroquinolin-1(2H)-yl)pyrido[2,3-d]pyrimidine, CALCIUM ION, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2017-11-29
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Heterocyclic-Fused Pyrimidines as Novel Tubulin Polymerization Inhibitors Targeting the Colchicine Binding Site: Structural Basis and Antitumor Efficacy.
J. Med. Chem., 61, 2018
5D4G
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BU of 5d4g by Molmil
2009 H1N1 PA endonuclease mutant F105S in complex with rUMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, URIDINE-5'-MONOPHOSPHATE
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-07
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5DBS
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BU of 5dbs by Molmil
2009 H1N1 PA endonuclease mutant E119D in complex with dTMP
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2015-08-21
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016

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