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PDB: 659 results

2RIF
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BU of 2rif by Molmil
CBS domain protein PAE2072 from Pyrobaculum aerophilum complexed with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CESIUM ION, Conserved protein with 2 CBS domains
Authors:Lee, T.M, King, N.P, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2007-10-10
Release date:2008-06-17
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures and Functional Implications of an AMP-Binding Cystathionine beta-Synthase Domain Protein from a Hyperthermophilic Archaeon.
J.Mol.Biol., 380, 2008
3CIM
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BU of 3cim by Molmil
Carboxysome shell protein, CcmK2 C-terminal deletion mutant
Descriptor: Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2008-03-11
Release date:2009-02-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Insights from multiple structures of the shell proteins from the beta-carboxysome.
Protein Sci., 18, 2009
5W50
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BU of 5w50 by Molmil
Crystal structure of the segment, LIIKGI, from the RRM2 of TDP-43, residues 248-253
Descriptor: TAR DNA-binding protein 43
Authors:Guenther, E.L, Trinh, H, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2017-06-13
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.
Nat. Struct. Mol. Biol., 25, 2018
5W52
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BU of 5w52 by Molmil
MicroED structure of the segment, DLIIKGISVHI, from the RRM2 of TDP-43, residues 247-257
Descriptor: TAR DNA-binding protein 43
Authors:Guenther, E.L, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
Deposit date:2017-06-13
Release date:2018-02-21
Last modified:2024-04-03
Method:ELECTRON CRYSTALLOGRAPHY (1.4 Å)
Cite:Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.
Nat. Struct. Mol. Biol., 25, 2018
3UE5
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BU of 3ue5 by Molmil
ECP-cleaved Actin in complex with Spir domain D
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chen, C, Phillips, M, Sawaya, M.R, Ralston, C.Y, Quinlan, M.E.
Deposit date:2011-10-28
Release date:2012-02-15
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Multiple Forms of Spire-Actin Complexes and their Functional Consequences.
J.Biol.Chem., 287, 2012
3IA0
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BU of 3ia0 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutS-G39V mutant
Descriptor: Ethanolamine utilization protein eutS
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-13
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3MLG
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BU of 3mlg by Molmil
2ouf-2x, a designed knotted protein
Descriptor: 2X chimera of Helicobacter pylori protein HP0242
Authors:King, N.P, Sawaya, M.R, Jacobitz, A.W, Yeates, T.O.
Deposit date:2010-04-16
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure and folding of a designed knotted protein.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MLI
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BU of 3mli by Molmil
2ouf-ds, a disulfide-linked dimer of Helicobacter pylori protein HP0242
Descriptor: CALCIUM ION, Putative uncharacterized protein
Authors:King, N.P, Sawaya, M.R, Jacobitz, A.W, Yeates, T.O.
Deposit date:2010-04-16
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and folding of a designed knotted protein.
Proc.Natl.Acad.Sci.USA, 107, 2010
6C3S
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BU of 6c3s by Molmil
AMYLOID FORMING PEPTIDE YTIAAL FROM TRANSTHYRETIN
Descriptor: TYR-THR-ILE-ALA-ALA-LEU
Authors:Sievers, S.A, Sawaya, M.R, Saelices, L, Eisenberg, D.S.
Deposit date:2018-01-10
Release date:2018-04-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Crystal structures of amyloidogenic segments of human transthyretin.
Protein Sci., 27, 2018
6C4O
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BU of 6c4o by Molmil
AMYLOID FORMING PEPTIDE TIAALLS FROM TRANSTHYRETIN
Descriptor: THR-ILE-ALA-ALA-LEU-LEU-SER
Authors:Sievers, S.A, Sawaya, M.R, Saelices, L, Eisenberg, D.S.
Deposit date:2018-01-12
Release date:2018-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structures of amyloidogenic segments of human transthyretin.
Protein Sci., 27, 2018
3DNC
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BU of 3dnc by Molmil
Carboxysome shell protein, CcmK2 C-terminal deletion mutant, with a closer spacing between hexamers
Descriptor: Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2008-07-01
Release date:2009-01-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Insights from multiple structures of the shell proteins from the beta-carboxysome.
Protein Sci., 18, 2009
1Z9W
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BU of 1z9w by Molmil
Tetrameric structure of apo-7,8-Dihydroneopterin Aldolase from Mycobacterium tuberculosis
Descriptor: Dihydroneopterin aldolase
Authors:Goulding, C.W, Apostol, M.I, Sawaya, M.R, Philips, M, Parseghian, A, Eisenberg, D, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
Deposit date:2005-04-05
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Regulation by oligomerization in a mycobacterial folate biosynthetic enzyme.
J.Mol.Biol., 349, 2005
3SEW
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BU of 3sew by Molmil
Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form I)
Descriptor: CHLORIDE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SEU
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BU of 3seu by Molmil
Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form III)
Descriptor: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SGP
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BU of 3sgp by Molmil
Amyloid-related segment of alphaB-crystallin residues 90-100 mutant V91L
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4016 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
3SEX
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BU of 3sex by Molmil
Ni-mediated Dimer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)
Descriptor: IODIDE ION, Maltose-binding periplasmic protein, NICKEL (II) ION, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SEY
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BU of 3sey by Molmil
Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)
Descriptor: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3Q25
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BU of 3q25 by Molmil
Crystal structure of human alpha-synuclein (1-19) fused to maltose binding protein (MBP)
Descriptor: GLYCEROL, Maltose-binding periplasmic protein/alpha-synuclein chimeric protein, SULFATE ION, ...
Authors:Zhao, M, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2010-12-19
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation
Protein Sci., 20, 2011
3PZZ
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BU of 3pzz by Molmil
Structure of an amyloid forming peptide GAIIGL (29-34) from amyloid beta
Descriptor: Amyloid beta A4 protein
Authors:Soriaga, A.B, Laganowsky, A.L, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-14
Release date:2011-10-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Molecular basis for amyloid-beta polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
3G7W
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BU of 3g7w by Molmil
Islet Amyloid Polypeptide (IAPP or Amylin) Residues 1 to 22 fused to Maltose Binding Protein
Descriptor: GLYCEROL, Maltose-binding periplasmic protein, Islet amyloid polypeptide fusion protein, ...
Authors:Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
Deposit date:2009-02-11
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Atomic structures of IAPP (amylin) fusions suggest a mechanism for fibrillation and the role of insulin in the process
Protein Sci., 18, 2009
3G7V
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BU of 3g7v by Molmil
Islet Amyloid Polypeptide (IAPP or Amylin) fused to Maltose Binding Protein
Descriptor: GLYCEROL, Maltose-binding periplasmic protein, Islet amyloid polypeptide fusion protein, ...
Authors:Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
Deposit date:2009-02-10
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Atomic structures of IAPP (amylin) fusions suggest a mechanism for fibrillation and the role of insulin in the process
Protein Sci., 18, 2009
3SGO
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BU of 3sgo by Molmil
Amyloid-related segment of alphaB-crystallin residues 90-100
Descriptor: Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.557 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
3SB5
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BU of 3sb5 by Molmil
Zn-mediated Trimer of T4 Lysozyme R125C/E128C by Synthetic Symmetrization
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme, ...
Authors:Laganowsky, A, Soriaga, A.B, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-03
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SGS
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BU of 3sgs by Molmil
Amyloid-related segment of alphaB-crystallin residues 95-100
Descriptor: Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
3Q29
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BU of 3q29 by Molmil
Cyrstal structure of human alpha-synuclein (1-19) fused to maltose binding protein (MBP)
Descriptor: GLYCEROL, Maltose-binding periplasmic protein/alpha-synuclein chimeric protein, SULFATE ION, ...
Authors:Zhao, M, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2010-12-19
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation
Protein Sci., 20, 2011

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