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PDB: 811 results

6EED
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BU of 6eed by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6p) and catalytic zinc ion
Descriptor: (2R)-2-[(cyclohexylacetyl)amino]-N-hydroxy-2-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)acetamide, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EA2
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BU of 6ea2 by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6h) and catalytic zinc ion
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-02
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EE2
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BU of 6ee2 by Molmil
X-ray crystal structure of Pf-M17 in complex with inhibitor 6i and regulatory zinc ion
Descriptor: 1,2-ETHANEDIOL, CARBONATE ION, DIMETHYL SULFOXIDE, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
8E5R
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BU of 8e5r by Molmil
Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0150610 Complex
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase oxamniquine resistance protein, [4-({[(3R)-1-[(1H-indol-3-yl)methyl]-3-{[4-(trifluoromethyl)phenyl]methyl}pyrrolidin-3-yl]methyl}amino)-3-nitrophenyl]methanol
Authors:Taylor, A.B, Alwan, S.N.
Deposit date:2022-08-22
Release date:2023-07-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Oxamniquine derivatives overcome Praziquantel treatment limitations for Schistosomiasis.
Plos Pathog., 19, 2023
8E5Q
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BU of 8e5q by Molmil
Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0150303 Complex
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase oxamniquine resistance protein, [2-(dihydroxyamino)-4-({[(3R)-1-[(1H-indol-3-yl)methyl]-3-{[3-(trifluoromethyl)phenyl]methyl}pyrrolidin-3-yl]methyl}amino)phenyl]methanol
Authors:Taylor, A.B, Alwan, S.N.
Deposit date:2022-08-22
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Oxamniquine derivatives overcome Praziquantel treatment limitations for Schistosomiasis.
Plos Pathog., 19, 2023
6B73
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BU of 6b73 by Molmil
Crystal Structure of a nanobody-stabilized active state of the kappa-opioid receptor
Descriptor: CHOLESTEROL, N-[(5alpha,6beta)-17-(cyclopropylmethyl)-3-hydroxy-7,8-didehydro-4,5-epoxymorphinan-6-yl]-3-iodobenzamide, Nanobody, ...
Authors:Che, T, Majumdar, S, Zaidi, S.A, Kormos, C, McCorvy, J.D, Wang, S, Mosier, P.D, Uprety, R, Vardy, E, Krumm, B.E, Han, G.W, Lee, M.Y, Pardon, E, Steyaert, J, Huang, X.P, Strachan, R.T, Tribo, A.R, Pasternak, G.W, Carroll, I.F, Stevens, R.C, Cherezov, V, Katritch, V, Wacker, D, Roth, B.L.
Deposit date:2017-10-03
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the Nanobody-Stabilized Active State of the Kappa Opioid Receptor.
Cell, 172, 2018
8FCJ
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BU of 8fcj by Molmil
Cryo-EM structure of Cascade-DNA (P23) complex in type I-B CAST system
Descriptor: Non-target DNA strand, RNA, Target DNA strand, ...
Authors:Chang, L, Wang, S.
Deposit date:2022-12-01
Release date:2023-08-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
Cell, 186, 2023
8FD3
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BU of 8fd3 by Molmil
Cryo-EM structure of Cascade-PAM complex in type I-B CAST system
Descriptor: Non-target DNA strand, RNA, Target DNA strand, ...
Authors:Chang, L, Wang, S.
Deposit date:2022-12-01
Release date:2023-08-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
Cell, 186, 2023
8FF5
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BU of 8ff5 by Molmil
Cryo-EM structure of Cascade-DNA-fullRloop in type I-B CAST system
Descriptor: Non-target DNA strand, Nostoc sp. 'Peltigera membranacea cyanobiont' 210A, RNA, ...
Authors:Chang, L, Wang, S.
Deposit date:2022-12-07
Release date:2023-08-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector.
Cell, 186, 2023
5WIV
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BU of 5wiv by Molmil
Structure of the sodium-bound human D4 Dopamine receptor in complex with Nemonapride
Descriptor: D(4) dopamine receptor, soluble cytochrome b562 chimera, DI(HYDROXYETHYL)ETHER, ...
Authors:Wacker, D, Wang, S, Levit, A, Che, T, Betz, R.M, McCorvy, J.D, Venkatakrishnan, A.J, Huang, X.-P, Dror, R.O, Shoichet, B.K, Roth, B.L.
Deposit date:2017-07-20
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.143 Å)
Cite:D4 dopamine receptor high-resolution structures enable the discovery of selective agonists.
Science, 358, 2017
6NVB
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BU of 6nvb by Molmil
Crystal structure of the inhibitor-free form of the serine protease kallikrein-4
Descriptor: GLYCEROL, Kallikrein-4, SULFATE ION
Authors:Riley, B.T, Buckle, A.M, McGowan, S.
Deposit date:2019-02-04
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Crystal structure of the inhibitor-free form of the serine protease kallikrein-4.
Acta Crystallogr.,Sect.F, 75, 2019
2GGT
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BU of 2ggt by Molmil
Crystal structure of human SCO1 complexed with nickel.
Descriptor: CHLORIDE ION, NICKEL (II) ION, SCO1 protein homolog, ...
Authors:Banci, L, Bertini, I, Calderone, V, Ciofi-Baffoni, S, Mangani, S, Martinelli, M, Palumaa, P, Wang, S.
Deposit date:2006-03-24
Release date:2006-05-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A hint for the function of human Sco1 from different structures.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3QYC
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BU of 3qyc by Molmil
Structure of a dimeric anti-HER2 single domain antibody
Descriptor: VH domain of IgG molecule
Authors:Baral, T.N, Chao, S, Li, S, Tanha, J, Arbabai, M, Wang, S, Zhang, J.
Deposit date:2011-03-03
Release date:2012-02-08
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of a Human Single Domain Antibody Dimer Formed through V(H)-V(H) Non-Covalent Interactions.
Plos One, 7, 2012
6EEE
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BU of 6eee by Molmil
X-ray crystal structure of Pf-M17 in complex with inhibitor (6k) and regulatory zinc ion
Descriptor: (1R,2r,3S,5R,7R)-N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]tricyclo[3.3.1.1~3,7~]decane-2-carboxamide, 1,2-ETHANEDIOL, CARBONATE ION, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
5KCC
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BU of 5kcc by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with Oxabicyclic Heptene Sulfonamide (OBHS-N)
Descriptor: (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-N-phenyl-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor, NCOA2
Authors:Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
Deposit date:2016-06-06
Release date:2016-11-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.386 Å)
Cite:Full antagonism of the estrogen receptor without a prototypical ligand side chain.
Nat. Chem. Biol., 13, 2017
7KWW
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BU of 7kww by Molmil
X-ray Crystal Structure of PlyCB Mutant K59H
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PlyCB
Authors:Williams, D.E, Broendum, S.S, Hayes, B.K, Drinkwater, N, McGowan, S.
Deposit date:2020-12-02
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High avidity drives the interaction between the streptococcal C1 phage endolysin, PlyC, with the cell surface carbohydrates of Group A Streptococcus.
Mol.Microbiol., 116, 2021
7KWY
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BU of 7kwy by Molmil
X-ray Crystal Structure of PlyCB Mutant R66K
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PlyCB
Authors:Williams, D.E, Broendum, S.S, Hayes, B.K, Drinkwater, N, McGowan, S.
Deposit date:2020-12-02
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High avidity drives the interaction between the streptococcal C1 phage endolysin, PlyC, with the cell surface carbohydrates of Group A Streptococcus.
Mol.Microbiol., 116, 2021
7KWT
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BU of 7kwt by Molmil
X-ray Crystal Structure of PlyCB Mutant Y28H
Descriptor: PlyCB
Authors:Williams, D.E, Broendum, S.S, Hayes, B.K, Drinkwater, N, McGowan, S.
Deposit date:2020-12-02
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:High avidity drives the interaction between the streptococcal C1 phage endolysin, PlyC, with the cell surface carbohydrates of Group A Streptococcus.
Mol.Microbiol., 116, 2021
3OH6
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BU of 3oh6 by Molmil
AlkA Undamaged DNA Complex: Interrogation of a C:G base pair
Descriptor: 5'-D(*GP*AP*CP*AP*(BRU)P*GP*AP*AP*(BRU)P*GP*CP*C)-3', 5'-D(*GP*CP*AP*TP*TP*CP*AP*TP*GP*TP*C)-3', DNA-3-methyladenine glycosylase 2
Authors:Bowman, B.R, Lee, S, Wang, S, Verdine, G.L.
Deposit date:2010-08-17
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.894 Å)
Cite:Structure of Escherichia coli AlkA in Complex with Undamaged DNA.
J.Biol.Chem., 285, 2010
6JIC
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BU of 6jic by Molmil
Identification and Characterization of a carboxypeptidase inhibitor from Lycium barbarum
Descriptor: WCI
Authors:Tan, W.L, Wong, K.H, Huang, J.Y, Tay, S.V, Wang, S.J.
Deposit date:2019-02-20
Release date:2020-02-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification and characterization of a wolfberry carboxypeptidase inhibitor from Lycium barbarum.
Food Chem, 351, 2021
5KYO
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BU of 5kyo by Molmil
Crystal Structure of CYP101J2
Descriptor: CYP101J2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Unterweger, B, Drinkwater, N, Dumsday, G.J, McGowan, S.
Deposit date:2016-07-22
Release date:2017-01-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of cytochrome P450 monooxygenase CYP101J2 from Sphingobium yanoikuyae strain B2.
Proteins, 85, 2017
3OSG
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BU of 3osg by Molmil
The structure of protozoan parasite Trichomonas vaginalis Myb2 in complex with MRE-1-12 DNA
Descriptor: 5'-D(*AP*AP*AP*TP*AP*TP*CP*GP*TP*TP*AP*T)-3', 5'-D(*AP*TP*AP*AP*CP*GP*AP*TP*AP*TP*TP*T)-3', MYB21
Authors:Jiang, I, Tsai, C.K, Chen, S.C, Wang, S.H, Amiraslanov, I, Chang, C.F, Wu, W.J, Tai, J.H, Liaw, Y.C, Huang, T.H.
Deposit date:2010-09-09
Release date:2011-08-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Molecular basis of the recognition of the ap65-1 gene transcription promoter elements by a Myb protein from the protozoan parasite Trichomonas vaginalis.
Nucleic Acids Res., 39, 2011
6KWN
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BU of 6kwn by Molmil
Crystal structure of pSLA-1*1301(F99Y) complex with S-OIV-derived epitope NSDTVGWSW
Descriptor: Beta-2-microglobulin, MHC class I antigen, peptide
Authors:Wei, X.H, Wang, S, Zhang, N.Z, Xia, C.
Deposit date:2019-09-07
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Peptidomes and Structures Illustrate Two Distinguishing Mechanisms of Alternating the Peptide Plasticity Caused by Swine MHC Class I Micropolymorphism.
Front Immunol, 12, 2021
6EE3
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BU of 6ee3 by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6k) and catalytic zinc ion
Descriptor: (1R,2r,3S,5R,7R)-N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]tricyclo[3.3.1.1~3,7~]decane-2-carboxamide, GLYCEROL, M1 family aminopeptidase, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EAB
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BU of 6eab by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6j) and catalytic zinc ion
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-02
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019

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