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PDB: 650 results

3U4O
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BU of 3u4o by Molmil
Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
Descriptor: 1-[(2-aminopyridin-4-yl)methyl]-5-chloro-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
Authors:Anilkumar, G.N, Selyutin, O, Rosenblum, S.B, Zeng, Q, Jiang, Y, Chan, T.-Y, Pu, H, Wang, L, Bennett, F, Chen, K.X, Lesburg, C.A, Duca, J.S, Gavalas, S, Huang, Y, Pinto, P, Sannigrahi, M, Velazquez, F, Venkataraman, S, Vilbubhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Huang, H.-C, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2011-10-10
Release date:2011-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:II. Novel HCV NS5B polymerase inhibitors: Discovery of indole C2 acyl sulfonamides.
Bioorg.Med.Chem.Lett., 22, 2012
4JST
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BU of 4jst by Molmil
Structure of Clostridium thermocellum polynucleotide kinase bound to UTP
Descriptor: MAGNESIUM ION, Metallophosphoesterase, SODIUM ION, ...
Authors:Das, U, Wang, L.K, Smith, P, Shuman, S.
Deposit date:2013-03-22
Release date:2013-08-28
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system.
Biochemistry, 52, 2013
2J9I
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BU of 2j9i by Molmil
Lengsin is a survivor of an ancient family of class I glutamine synthetases in eukaryotes that has undergone evolutionary re- engineering for a tissue-specific role in the vertebrate eye lens.
Descriptor: GLUTAMATE-AMMONIA LIGASE DOMAIN-CONTAINING PROTEIN 1
Authors:Wyatt, K, White, H.E, Wang, L, Bateman, O.A, Slingsby, C, Orlova, E.V, Wistow, G.
Deposit date:2006-11-09
Release date:2006-12-13
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Lengsin is a Survivor of an Ancient Family of Class I Glutamine Synthetases Re-Engineered by Evolution for a Role in the Vertebrate Lens.
Structure, 14, 2006
8J1K
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BU of 8j1k by Molmil
co-crystal structure of non-carboxylic acid inhibitor with PHD2
Descriptor: Egl nine homolog 1, MANGANESE (II) ION, N-[(6-cyanopyridin-3-yl)methyl]-5-oxidanyl-2-[(3R)-3-oxidanylpyrrolidin-1-yl]-1,7-naphthyridine-6-carboxamide
Authors:Xu, J, Fu, Y, Ding, X, Meng, Q, Wang, L, Zhang, M, Ding, X, Ren, F, Zhavoronkov, A.
Deposit date:2023-04-13
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:co-crystal structure of non-carboxylic acid inhibitor with PHD2
To Be Published
7CYF
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BU of 7cyf by Molmil
Cryo-EM structure of bicarbonate transporter SbtA in complex with PII-like signaling protein SbtB from Synechocystis sp. PCC 6803
Descriptor: ADENOSINE MONOPHOSPHATE, Membrane-associated protein slr1513, SODIUM ION, ...
Authors:Liu, X.Y, Jiang, Y.L, Wang, L, Hou, W.T, Chen, Y, Zhou, C.Z.
Deposit date:2020-09-03
Release date:2021-06-23
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structures of cyanobacterial bicarbonate transporter SbtA and its complex with PII-like SbtB.
Cell Discov, 7, 2021
7CYE
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BU of 7cye by Molmil
Cryo-EM structure of sodium-dependent bicarbonate transporter SbtA from Synechocystis sp. PCC 6803
Descriptor: Slr1512 protein
Authors:Liu, X.Y, Jiang, Y.L, Wang, L, Hou, W.T, Chen, Y, Zhou, C.Z.
Deposit date:2020-09-03
Release date:2021-06-23
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Structures of cyanobacterial bicarbonate transporter SbtA and its complex with PII-like SbtB.
Cell Discov, 7, 2021
2JAS
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BU of 2jas by Molmil
Structure of deoxyadenosine kinase from M.mycoides with bound dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DEOXYGUANOSINE KINASE, MAGNESIUM ION
Authors:Welin, M, Wang, L, Eriksson, S, Eklund, H.
Deposit date:2006-11-30
Release date:2007-01-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-Function Analysis of a Bacterial Deoxyadenosine Kinase Reveals the Basis for Substrate Specificity.
J.Mol.Biol., 366, 2007
2I89
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BU of 2i89 by Molmil
Structure of septuple mutant of Rat Outer Mitochondrial Membrane Cytochrome B5
Descriptor: Cytochrome b5 type B, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Terzyan, S, Zhang, X.C, Benson, D.R, Wang, L, Sun, N.
Deposit date:2006-09-01
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A histidine/tryptophan pi-stacking interaction stabilizes the heme-independent folding core of microsomal apocytochrome b5 relative to that of mitochondrial apocytochrome b5.
Biochemistry, 45, 2006
2H50
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BU of 2h50 by Molmil
Multiple distinct assemblies reveal conformational flexibility in the small heat shock protein Hsp26
Descriptor: small heat shock protein Hsp26
Authors:White, H.E, Orlova, E.V, Chen, S, Wang, L, Ignatiou, A, Gowen, B, Stromer, T, Franzmann, T.M, Haslbeck, M, Buchner, J, Saibil, H.R.
Deposit date:2006-05-25
Release date:2006-08-01
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Multiple distinct assemblies reveal conformational flexibility in the small heat shock protein hsp26
Structure, 14, 2006
2H53
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BU of 2h53 by Molmil
Multiple distinct assemblies reveal conformational flexibility in the small heat shock protein Hsp26
Descriptor: small heat shock protein Hsp26
Authors:White, H.E, Orlova, E.V, Chen, S, Wang, L, Ignatiou, A, Gowen, B, Stromer, T, Franzmann, T.M, Haslbeck, M, Buchner, J, Saibil, H.R.
Deposit date:2006-05-25
Release date:2006-08-01
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Multiple distinct assemblies reveal conformational flexibility in the small heat shock protein hsp26
Structure, 14, 2006
5XM5
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BU of 5xm5 by Molmil
Crystal structure of Zinc binding protein ZinT at 1.49 Angstrom from E. coli
Descriptor: Metal-binding protein ZinT, SODIUM ION, ZINC ION
Authors:Chen, J, Wang, L, Guo, J, Xu, Y.
Deposit date:2017-05-12
Release date:2017-05-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:Crystal structure of Zinc binding protein ZinT at 1.49 Angstrom from E. coli
To Be Published
2I74
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BU of 2i74 by Molmil
Crystal structure of mouse Peptide N-Glycanase C-terminal domain in complex with mannopentaose
Descriptor: ACETATE ION, GLYCEROL, PNGase, ...
Authors:Zhou, X, Zhao, G, Wang, L, Li, G, Lennarz, W.J, Schindelin, H.
Deposit date:2006-08-30
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical studies of the C-terminal domain of mouse peptide-N-glycanase identify it as a mannose-binding module.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5Z7H
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BU of 5z7h by Molmil
Crystal structure of CcpE regulatory domain in citrate-bound form from Staphyloccocus aureus
Descriptor: CITRATE ANION, LysR family transcriptional regulator
Authors:Chen, J, Wang, L, Shang, F, Xu, Y.
Deposit date:2018-01-28
Release date:2018-02-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Citrate-responsive mechanism of catabolite control protein E from Staphyloccocus aureus
To Be Published
2M5N
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BU of 2m5n by Molmil
Atomic-resolution structure of a cross-beta protofilament
Descriptor: Transthyretin
Authors:Fitzpatrick, A.W.P, Debelouchina, G.T, Bayro, M.J, Clare, D.K, Caporini, M.A, Bajaj, V.S, Jaroniec, C.P, Wang, L, Ladizhansky, V, Muller, S, MacPhee, C.E, Waudby, C.A, Mott, H.R, de Simone, A, Knowles, T.P.J, Saibil, H.R, Vendruscolo, M, Orlova, E.V, Griffin, R.G, Dobson, C.M.
Deposit date:2013-02-27
Release date:2013-07-17
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic structure and hierarchical assembly of a cross-{beta} amyloid fibril.
Proc.Natl.Acad.Sci.USA, 110, 2013
7BTZ
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BU of 7btz by Molmil
Crystal structure of TrmO
Descriptor: Putative tRNA (Adenine(37)-N6)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Fan, C.P, Wang, L, Hu, W.H, Yang, C.W.
Deposit date:2020-04-03
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of TrmO from Pseudomonas aeruginosa
To Be Published
7EXX
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BU of 7exx by Molmil
The structure of DndG
Descriptor: DNA phosphorothioation-dependent restriction protein DptG, SODIUM ION
Authors:Wu, D, Wang, L.
Deposit date:2021-05-28
Release date:2022-06-01
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The functional coupling between restriction and DNA phosphorothioate modification systems underlying the DndFGH restriction complex
Nat Catal, 2022
7FJG
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BU of 7fjg by Molmil
Crystal structure of butanol dehydrogenase A (YqdH) in complex with partial NADH from Fusobacterium nucleatum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FE (III) ION, NADH-dependent butanol dehydrogenase A
Authors:Bai, X, Lan, J, Wang, L, Bu, T, Xu, Y.
Deposit date:2021-08-03
Release date:2022-06-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure of butanol dehydrogenase A (YqdH) in complex with partial NADH from Fusobacterium nucleatum
To Be Published
8IT0
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BU of 8it0 by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-2)
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
7FDV
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BU of 7fdv by Molmil
Cryo-EM structure of the human cholesterol transporter ABCG1 in complex with cholesterol
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family G member 1, CHOLESTEROL, ...
Authors:Xu, D, Li, Y.Y, Yang, F.R, Sun, C.R, Pan, J.H, Wang, L, Chen, Z.P, Fang, S.C, Yao, X.B, Hou, W.T, Zhou, C.Z, Chen, Y.
Deposit date:2021-07-18
Release date:2022-06-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structure and transport mechanism of the human cholesterol transporter ABCG1.
Cell Rep, 38, 2022
8ISZ
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BU of 8isz by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA monomer
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8ISY
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BU of 8isy by Molmil
Cryo-EM structure of free-state Crt-SPARTA
Descriptor: Piwi domain-containing protein, TIR domain-containing protein
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-03-21
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8K4Y
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BU of 8k4y by Molmil
Structure of a triple-helix region of human ReCol 3 from Trautec
Descriptor: SULFATE ION, triple-helix region of human ReCol 3
Authors:Chu, Y, Zhai, Y, Fan, X, Li, J, Wang, L, Fu, S, Feng, P, Qian, S.
Deposit date:2023-07-20
Release date:2023-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a triple-helix region of human ReCol 3 from Trautec.
To Be Published
8K9G
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BU of 8k9g by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-1)
Descriptor: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
Authors:Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
Deposit date:2023-08-01
Release date:2023-10-18
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8I4B
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BU of 8i4b by Molmil
Cryo-EM structure of apo-form ABCC4
Descriptor: ATP-binding cassette sub-family C member 4
Authors:Chen, Y, Wang, L, Hou, W.T, Zhou, C.Z, Chen, Y, Li, Q.
Deposit date:2023-01-19
Release date:2023-05-24
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Cryo-EM structure ofABCC4
Nat Cardiovasc Res, 2023
8I4A
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BU of 8i4a by Molmil
Cryo-EM structure of dipyridamole-bound ABCC4
Descriptor: 2-[[2-[bis(2-hydroxyethyl)amino]-4,8-di(piperidin-1-yl)pyrimido[5,4-d]pyrimidin-6-yl]-(2-hydroxyethyl)amino]ethanol, ATP-binding cassette sub-family C member 4
Authors:Chen, Y, Wang, L, Hou, W.T, Zhou, C.Z, Chen, Y, Li, Q.
Deposit date:2023-01-19
Release date:2023-05-24
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure ofABCC4
Nat Cardiovasc Res, 2023

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