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PDB: 901 results

5E2Y
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Crystal structure of H5 hemagglutinin Q226L mutant from the influenza virus A/duck/Egypt/10185SS/2010 (H5N1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, beta-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2015-10-01
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for a Switch in Receptor Binding Specificity of Two H5N1 Hemagglutinin Mutants.
Cell Rep, 13, 2015
5E99
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BU of 5e99 by Molmil
Bovine Fab fragment F08_B11
Descriptor: Fab F08_B11 heavy chain, Fab F08_B11 light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2015-10-14
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Conservation and diversity in the ultralong third heavy-chain complementarity-determining region of bovine antibodies.
Sci Immunol, 1, 2016
2KL4
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BU of 2kl4 by Molmil
NMR structure of the protein NB7804A
Descriptor: BH2032 protein
Authors:Mohanty, B, Geralt, M, Augustyniak, W, Serrano, P, Horst, R, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-30
Release date:2009-07-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the protein NB7804A from Bacillus Halodurans
To be Published
2KA0
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BU of 2ka0 by Molmil
NMR structure of the protein TM1367
Descriptor: uncharacterized protein TM1367
Authors:Mohanty, B, Pedrini, B, Serrano, P, Geralt, M, Horst, R, Herrmann, T, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-27
Release date:2009-01-13
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Comparison of NMR and crystal structures for the proteins TM1112 and TM1367.
Acta Crystallogr.,Sect.F, 66, 2010
2O5Y
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BU of 2o5y by Molmil
Crystal structure of the 1E9 LeuH47Trp/ArgH100Trp Fab progesterone complex
Descriptor: PROGESTERONE, SULFATE ION, chimeric antibody Fab 1E9-DB3
Authors:Verdino, P, Wilson, I.A.
Deposit date:2006-12-06
Release date:2007-12-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Closely related antibody receptors exploit fundamentally different strategies for steroid recognition.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2NTF
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Crystal Structure of a Quorum-Quenching Antibody in Complex with an N-Acyl-L-Homoserine Lactone Analog
Descriptor: 3-OXO-N-[(3S)-2-OXOPYRROLIDIN-3-YL]DODECANAMIDE, Murine Antibody Fab RS2-1G9 IGG1 Heavy Chain, Murine Antibody Fab RS2-1G9 Lambda Light Chain
Authors:Debler, E.W, Wilson, I.A.
Deposit date:2006-11-07
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Crystal Structures of a Quorum-quenching Antibody.
J.Mol.Biol., 368, 2007
2OJZ
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BU of 2ojz by Molmil
Anti-DNA antibody ED10
Descriptor: Fab ED10 heavy chain, Fab ED10 light chain
Authors:Stanfield, R.L, Sanguineti, S, Wilson, I.A, de Prat-Gay, G.
Deposit date:2007-01-15
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Specific recognition of a DNA immunogen by its elicited antibody
J.Mol.Biol., 370, 2007
2O5X
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BU of 2o5x by Molmil
Crystal structure of 1E9 LeuH47Trp/ArgH100Trp, an engineered Diels-Alderase Fab with nM steroid-binding affinity
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, chimeric antibody Fab 1E9-DB3
Authors:Verdino, P, Wilson, I.A.
Deposit date:2006-12-06
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Closely related antibody receptors exploit fundamentally different strategies for steroid recognition.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2KYZ
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BU of 2kyz by Molmil
NMR structure of heavy metal binding protein TM0320 from Thermotoga maritima
Descriptor: Heavy metal binding protein
Authors:Jaudzems, K, Wahab, A, Serrano, P, Geralt, M, Wuthrich, K, Wilson, I.A, Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-09
Release date:2010-07-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of heavy metal binding protein TM0320 from Thermotoga maritima
To be Published
2KZC
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BU of 2kzc by Molmil
Solution NMR structure of the protein YP_510488.1
Descriptor: Uncharacterized protein
Authors:Mohanty, B, Serrano, P, Geralt, M, Horst, R, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-15
Release date:2010-07-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of the protein YP_510488.1
To be Published
2KZF
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BU of 2kzf by Molmil
Solution NMR structure of the thermotoga maritima protein TM0855 a putative ribosome binding factor A
Descriptor: Ribosome-binding factor A
Authors:Serrano, P, Jaudzems, K, Horst, R, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-16
Release date:2010-08-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of the thermotoga maritima protein TM0855
To be Published
3OAZ
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BU of 3oaz by Molmil
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
Descriptor: CHLORIDE ION, Fab 2G12, heavy chain, ...
Authors:Doores, K.J, Fulton, Z, Hong, V, Patel, M.K, Scanlan, C.N, Wormald, M.R, Finn, M.G, Burton, D.R, Wilson, I.A, Davis, B.G.
Deposit date:2010-08-06
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A nonself sugar mimic of the HIV glycan shield shows enhanced antigenicity.
Proc.Natl.Acad.Sci.USA, 107, 2010
3O2V
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BU of 3o2v by Molmil
Crystal structure of 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe, an engineered Diels-Alderase Fab with modified specificity and catalytic activity
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CITRATE ANION, Chimeric antibody Fab 1E9, ...
Authors:Verdino, P, Wilson, I.A.
Deposit date:2010-07-22
Release date:2011-07-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe, an engineered Diels-Alderase Fab with modified specificity and catalytic activity
To be Published
3OAY
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BU of 3oay by Molmil
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
Descriptor: Fab 2G12, heavy chain, light chain, ...
Authors:Doores, K.J, Fulton, Z, Hong, V, Patel, M.K, Scanlan, C.N, Wormald, M.R, Finn, M.G, Burton, D.R, Wilson, I.A, Davis, B.G.
Deposit date:2010-08-05
Release date:2011-01-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A nonself sugar mimic of the HIV glycan shield shows enhanced antigenicity.
Proc.Natl.Acad.Sci.USA, 107, 2010
3OAU
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BU of 3oau by Molmil
Antibody 2G12 Recognizes Di-Mannose Equivalently in Domain- and Non-Domain-Exchanged Forms, but only binds the HIV-1 Glycan Shield if Domain-Exchanged
Descriptor: Fab 2G12, heavy chain, light chain, ...
Authors:Doores, K.J, Fulton, Z, Huber, M, Wilson, I.A, Burton, D.R.
Deposit date:2010-08-05
Release date:2011-01-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Antibody 2G12 recognizes di-mannose equivalently in domain- and nondomain-exchanged forms but only binds the HIV-1 glycan shield if domain exchanged.
J.Virol., 84, 2010
7JN5
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BU of 7jn5 by Molmil
Crystal structure of SARS-CoV receptor binding domain in complex with human antibody CR3022
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CR3022 heavy chain, ...
Authors:Wu, N.C, Yuan, M, Zhu, X, Wilson, I.A.
Deposit date:2020-08-03
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:A natural mutation between SARS-CoV-2 and SARS-CoV determines neutralization by a cross-reactive antibody.
Plos Pathog., 16, 2020
7JTF
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BU of 7jtf by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM2-01
Descriptor: Envelope glycoprotein E2, RM2-01 Fab heavy chain, RM2-01 Fab light chain
Authors:Tzarum, N, Wilson, I.A, Law, M.
Deposit date:2020-08-17
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:HCV Env immunization elicits a rapid VH1-69-like broadly neutralizing antibody response in rhesus macaques
Immunity, 2021
7JTG
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BU of 7jtg by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM11-43
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
Authors:Tzarum, N, Wilson, I.A, Law, M.
Deposit date:2020-08-17
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:HCV Env immunization elicits a rapid VH1-69-like broadly neutralizing antibody response in rhesus macaques
Immunity, 2021
7JPI
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BU of 7jpi by Molmil
Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
Authors:Chaudhary, A, Stanfield, R.L, Wilson, I.A, Zhu, J.
Deposit date:2020-08-08
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines.
Nat Commun, 12, 2021
7JPH
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BU of 7jph by Molmil
Crystal structure of EBOV glycoprotein with modified HR1c and HR2 stalk at 3.2 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
Authors:Chaudhary, A, Stanfield, R.L, Wilson, I.A, Zhu, J.
Deposit date:2020-08-08
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.195 Å)
Cite:Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines.
Nat Commun, 12, 2021
7K75
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BU of 7k75 by Molmil
Crystal structure of MAD2-6 IgA Fab in complex with PfCSP N-terminal peptide.
Descriptor: Heavy chain of MAD2-6 IgA Fab, Light chain of MAD2-6 IgA Fab, PfCSP N-terminal peptide P17
Authors:Pholcharee, T, Wilson, I.A.
Deposit date:2020-09-22
Release date:2021-06-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional human IgA targets a conserved site on malaria sporozoites.
Sci Transl Med, 13, 2021
7K76
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BU of 7k76 by Molmil
Crystal structure of MAD2-6 IgG Fab in complex with PfCSP N-terminal peptide.
Descriptor: Heavy chain of MAD2-6 IgG Fab, Light chain of MAD2-6 IgG Fab, PfCSP N-terminal peptide P17
Authors:Pholcharee, T, Wilson, I.A.
Deposit date:2020-09-22
Release date:2021-06-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Functional human IgA targets a conserved site on malaria sporozoites.
Sci Transl Med, 13, 2021
7KN5
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Crystal structure of SARS-CoV-2 receptor binding domain complexed with nanobodies VHH E and U
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, H, Yuan, M, Zhu, X, Wu, N.C, Wilson, I.A.
Deposit date:2020-11-04
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape.
Science, 371, 2021
3OZ9
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BU of 3oz9 by Molmil
Crystal Structure of anti-gp41 Fab NC-1
Descriptor: Fab NC-1 IgG2a heavy chain, Fab NC-1 kappa light chain, GLYCEROL
Authors:Stanfield, R.L, Calarese, D.A, Jiang, S, Wilson, I.A.
Deposit date:2010-09-24
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of anti-gp41 Fab NC-1
TO BE PUBLISHED
7JMP
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Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody COVA2-39
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COVA2-39 heavy chain, COVA2-39 light chain, ...
Authors:Wu, N.C, Yuan, M, Liu, H, Zhu, X, Wilson, I.A.
Deposit date:2020-08-02
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:An Alternative Binding Mode of IGHV3-53 Antibodies to the SARS-CoV-2 Receptor Binding Domain.
Cell Rep, 33, 2020

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PDB entries from 2024-09-11

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