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PDB: 1442 results

7XBU
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Crystal structure of the adenylation domain of CmnG in complex with capreomycidine
Descriptor: (2S)-amino[(4R)-2-amino-1,4,5,6-tetrahydropyrimidin-4-yl]ethanoic acid, CmnG
Authors:Chen, I.H, Wang, Y.L, Chang, C.Y.
Deposit date:2022-03-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Characterization and Structural Determination of CmnG-A, the Adenylation Domain That Activates the Nonproteinogenic Amino Acid Capreomycidine in Capreomycin Biosynthesis.
Chembiochem, 23, 2022
7XBV
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BU of 7xbv by Molmil
Crystal structure of the adenylation domain of CmnG in complex with AMPCPP
Descriptor: CmnG, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, PHOSPHATE ION
Authors:Chen, I.H, Wang, Y.L, Chang, C.Y.
Deposit date:2022-03-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Characterization and Structural Determination of CmnG-A, the Adenylation Domain That Activates the Nonproteinogenic Amino Acid Capreomycidine in Capreomycin Biosynthesis.
Chembiochem, 23, 2022
7XBT
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BU of 7xbt by Molmil
Crystal structure of the adenylation domain of CmnG in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CmnG, MAGNESIUM ION
Authors:Chen, I.H, Wang, Y.L, Chang, C.Y.
Deposit date:2022-03-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Characterization and Structural Determination of CmnG-A, the Adenylation Domain That Activates the Nonproteinogenic Amino Acid Capreomycidine in Capreomycin Biosynthesis.
Chembiochem, 23, 2022
6K4Q
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BU of 6k4q by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (CGG PAM)
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA (28-MER), DNA (5'-D(*AP*AP*AP*CP*GP*GP*TP*AP*TP*TP*G)-3'), ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-26
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
7D73
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BU of 7d73 by Molmil
Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (State I)
Descriptor: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, GUANOSINE-5'-TRIPHOSPHATE, Mannose-1-phosphate guanyltransferase alpha, ...
Authors:Zheng, L, Liu, Z, Wang, Y, Yang, F, Wang, J, Qing, J, Cai, X, Mo, X, Gao, N, Jia, D.
Deposit date:2020-10-02
Release date:2021-05-05
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of human GMPPA-GMPPB complex reveal how cells maintain GDP-mannose homeostasis.
Nat.Struct.Mol.Biol., 28, 2021
7D74
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Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (state II)
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Mannose-1-phosphate guanyltransferase alpha, Mannose-1-phosphate guanyltransferase beta
Authors:Zheng, L, Liu, Z, Wang, Y, Yang, F, Wang, J, Qing, J, cai, X, Mo, X, Gao, N, Jia, D.
Deposit date:2020-10-02
Release date:2021-05-19
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human GMPPA-GMPPB complex reveal how cells maintain GDP-mannose homeostasis.
Nat.Struct.Mol.Biol., 28, 2021
3V6Y
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BU of 3v6y by Molmil
crystal structure of FBF-2 in complex with a mutant gld-1 FBEa13 RNA
Descriptor: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*AP*CP*UP*GP*UP*GP*CP*CP*AP*UP*AP*C)-3')
Authors:Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
Deposit date:2011-12-20
Release date:2012-01-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
6LKQ
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The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Zhang, L, Wang, Y.H, Lancaster, L, Zhou, J, Noller, H.F.
Deposit date:2019-12-20
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structural basis for inhibition of ribosomal translocation by viomycin.
Proc.Natl.Acad.Sci.USA, 117, 2020
7D4O
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BU of 7d4o by Molmil
cyclic trinucleotide synthase CdnD in complex with ATP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase, ...
Authors:Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
Deposit date:2020-09-24
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
7BXG
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BU of 7bxg by Molmil
MavC-UBE2N-Ub complex
Descriptor: MavC, Polyubiquitin-C, Ubiquitin-conjugating enzyme E2 N
Authors:Gao, P, Wang, Y.
Deposit date:2020-04-19
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Insights into catalysis and regulation of non-canonical ubiquitination and deubiquitination by bacterial deamidase effectors.
Nat Commun, 11, 2020
7BXH
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BU of 7bxh by Molmil
MavC-Lpg2149 complex
Descriptor: Lpg2149, MavC
Authors:Gao, P, Wang, Y.
Deposit date:2020-04-19
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into catalysis and regulation of non-canonical ubiquitination and deubiquitination by bacterial deamidase effectors.
Nat Commun, 11, 2020
2LK3
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BU of 2lk3 by Molmil
U2/U6 Helix I
Descriptor: RNA (5'-R(*GP*GP*CP*UP*UP*AP*GP*AP*UP*CP*AP*GP*AP*AP*AP*UP*GP*AP*UP*CP*AP*GP*CP*C)-3')
Authors:Burke, J.E, Sashital, D.G, Zuo, X.E, Wang, Y, Butcher, S.E.
Deposit date:2011-10-03
Release date:2012-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the yeast U2/U6 snRNA complex.
Rna, 18, 2012
6K4S
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BU of 6k4s by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGC PAM)
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, non-targeted DNA, sgRNA, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-26
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
3V71
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BU of 3v71 by Molmil
Crystal structure of PUF-6 in complex with 5BE13 RNA
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Puf (Pumilio/fbf) domain-containing protein 7, confirmed by transcript evidence, ...
Authors:Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
Deposit date:2011-12-20
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
2LKR
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BU of 2lkr by Molmil
Yeast U2/U6 complex
Descriptor: RNA (111-MER)
Authors:Burke, J.E, Sashital, D.G, Zuo, X, Wang, Y, Butcher, S.E.
Deposit date:2011-10-19
Release date:2012-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the yeast U2/U6 snRNA complex.
Rna, 18, 2012
6BSY
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BU of 6bsy by Molmil
HIV-1 Rev assembly domain (residues 1-69)
Descriptor: PHOSPHATE ION, Protein Rev
Authors:Watts, N.R, Eren, E, Zhuang, X, Wang, Y.X, Steven, A.C, Wingfield, P.T.
Deposit date:2017-12-04
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A new HIV-1 Rev structure optimizes interaction with target RNA (RRE) for nuclear export.
J. Struct. Biol., 203, 2018
7YA2
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BU of 7ya2 by Molmil
Crystal structure of capsular polysaccharide synthesis enzyme CapG from Staphylococcus aureus
Descriptor: Capsular polysaccharide synthesis enzyme CapG
Authors:Chen, Y, Wang, Y.C.
Deposit date:2022-06-27
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the capsular polysaccharide-synthesis enzyme CapG from Staphylococcus aureus.
Acta Crystallogr.,Sect.F, 78, 2022
7WDL
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BU of 7wdl by Molmil
Fungal immunomodulatory protein FIP-nha
Descriptor: Fungal immunomodulatory protein
Authors:Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
Deposit date:2021-12-22
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties.
Int.J.Biol.Macromol., 213, 2022
6K57
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BU of 6k57 by Molmil
Crystal structure of dCas9 in complex with sgRNA and DNA (CGA PAM)
Descriptor: CRISPR-associated endonuclease Cas9, non-target DNA, sgRNA, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-28
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6JXR
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BU of 6jxr by Molmil
Structure of human T cell receptor-CD3 complex
Descriptor: T cell receptor alpha variable 12-3,Possible J 11 gene segment,T cell receptor alpha constant, T cell receptor beta variable 6-5,M1-specific T cell receptor beta chain,T cell receptor beta constant 2, T-cell surface glycoprotein CD3 delta chain, ...
Authors:Dong, D, Zheng, L, Lin, J, Zhu, Y, Li, N, Zhang, B, Xie, S, Zheng, J, Wang, Y, Gao, N, Huang, Z.
Deposit date:2019-04-24
Release date:2019-09-11
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of assembly of the human T cell receptor-CD3 complex.
Nature, 573, 2019
6KL6
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BU of 6kl6 by Molmil
Crystal structure of MERS-CoV N-NTD complexed with 5-Benzyloxygramine
Descriptor: N,N-dimethyl-1-(5-phenylmethoxy-1H-indol-3-yl)methanamine, Nucleoprotein
Authors:Hou, M.H, Lin, S.M, Wang, Y.S, Hsu, J.N.
Deposit date:2019-07-29
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design.
J.Med.Chem., 63, 2020
7X4T
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BU of 7x4t by Molmil
LpCdnE UMPNPP Mg complex
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, Cyclic dipyrimidine nucleotide synthase, GLYCEROL, ...
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-03
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X4F
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BU of 7x4f by Molmil
Native CD-NTase LpCdnE
Descriptor: Cyclic dipyrimidine nucleotide synthase, SULFATE ION
Authors:Chen, Y, Ko, T.P, Yang, C.S, Wang, Y.C, Hou, M.H.
Deposit date:2022-03-02
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
7X66
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BU of 7x66 by Molmil
SARS-CoV-2-Omicron-RBD and BD-236-GWP/P-VK antibody complex
Descriptor: BD-236 Fab heavy chain, BD-236 Fab light chain, Spike protein S1
Authors:Shi, R, Wang, Y, Wu, Z, Han, X, Yan, J.
Deposit date:2022-03-06
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:SARS-CoV-2-Omicron-RBD and BD-236-GWP/P-VK antibody complex
To Be Published
6KL2
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BU of 6kl2 by Molmil
Structure of the N-terminal domain of Middle East respiratory syndrome coronavirus nucleocapsid protein
Descriptor: Nucleoprotein
Authors:Hou, M.H, Wang, Y.S, Lin, S.M, Hsu, J.N.
Deposit date:2019-07-29
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design.
J.Med.Chem., 63, 2020

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數據於2024-07-24公開中

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