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PDB: 1457 件
8UEJ
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BU of 8uej by Molmil
ssRNA phage PhiCb5 virion
分子名称: CALCIUM ION, Coat protein, Maturation protein
著者Wang, Y, Zhang, J.
登録日2023-10-01
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural mechanisms of Tad pilus assembly and its interaction with an RNA virus.
Sci Adv, 10, 2024
8HXA
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BU of 8hxa by Molmil
Cryo-EM structure of MPXV M2 in complex with human B7.1
分子名称: NFkB inhibitor, T-lymphocyte activation antigen CD80
著者Wang, Y, Yang, S, Zhao, H, Deng, Z.
登録日2023-01-04
公開日2023-08-30
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural and functional insights into the modulation of T cell costimulation by monkeypox virus protein M2.
Nat Commun, 14, 2023
7E4Z
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BU of 7e4z by Molmil
Crystal structure of tubulin in complex with Maytansinol
分子名称: (1R,2S,3S,5S,6S,16E,18E,20R,21S)-11-chloro-6,21-dihydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaene-8,23-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Li, W.
登録日2021-02-16
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献C3 ester side chain plays a pivotal role in the antitumor activity of Maytansinoids.
Biochem.Biophys.Res.Commun., 566, 2021
7E4Q
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BU of 7e4q by Molmil
Crystal structure of tubulin in complex with L-DM1-SMe
分子名称: (1S,2R,3R,5R,6R,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl (2S)-2-{methyl[3-(methyldisulfanyl)propanoyl]amino}propanoate (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Li, W.
登録日2021-02-14
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献C3 ester side chain plays a pivotal role in the antitumor activity of Maytansinoids.
Biochem.Biophys.Res.Commun., 566, 2021
7E4R
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BU of 7e4r by Molmil
Crystal structure of tubulin in complex with D-DM1-SMe
分子名称: (10E,12E)-86-chloro-14-hydroxy-85,14-dimethoxy-33,2,7,10-tetramethyl-12,6-dioxo-7-aza-1(6,4)-oxazinana-3(2,3)-oxirana-8(1,3)-benzenacyclotetradecaphane-10,12-dien-4-yl N-methyl-N-(3-(methylsulfinothioyl)propanoyl)-D-alaninate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Li, W.
登録日2021-02-15
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.597 Å)
主引用文献C3 ester side chain plays a pivotal role in the antitumor activity of Maytansinoids.
Biochem.Biophys.Res.Commun., 566, 2021
7EN3
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BU of 7en3 by Molmil
Crystal structure of tubulin in complex with Tubulysin analogue TGL
分子名称: (2S,4R)-5-(4-fluorophenyl)-2-methyl-4-[[2-[(1R,3R)-4-methyl-3-[5-methylhexyl-[(2S,3S)-3-methyl-2-[[(2R)-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-1-oxidanyl-pentyl]-1,3-thiazol-4-yl]carbonylamino]pentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Li, W.
登録日2021-04-15
公開日2022-04-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.643 Å)
主引用文献The X-ray structure of tubulysin analogue TGL in complex with tubulin and three possible routes for the development of next-generation tubulysin analogues.
Biochem.Biophys.Res.Commun., 565, 2021
5ZQ4
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BU of 5zq4 by Molmil
PDE-Ubi-ADPr
分子名称: ADENOSINE MONOPHOSPHATE, SidE, ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.217 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
5ZQ3
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PDE-Ubiquitin
分子名称: SidE, Ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.182 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
5ZQ2
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BU of 5zq2 by Molmil
SidE apo form
分子名称: SidE
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
5ZQ7
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BU of 5zq7 by Molmil
SidE-Ubi-NAD
分子名称: ADENOSINE MONOPHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SidE, ...
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.847 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
5ZQ6
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BU of 5zq6 by Molmil
SidE-Ubi-ADPr
分子名称: ADENOSINE-5'-DIPHOSPHATE, SidE, Ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.009 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
7WO3
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BU of 7wo3 by Molmil
SARS-CoV-2 3CLpro
分子名称: (2S)-2-[[(2S)-2-[[(E)-3-(4-methoxyphenyl)prop-2-enoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]pentanamide, 3C-like proteinase
著者Wang, Y, Ye, S.
登録日2022-01-20
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
5ZQ5
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BU of 5zq5 by Molmil
SidE-Ubi
分子名称: SidE, Ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2018-05-30
実験手法X-RAY DIFFRACTION (2.487 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
7WO2
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BU of 7wo2 by Molmil
SARS-CoV-2 3CLPro Peptidomimetic Inhibitor TPM5
分子名称: 3C-like proteinase, N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S}-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]furan-2-carboxamide
著者Wang, Y, Ye, S.
登録日2022-01-20
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Discovery of SARS-CoV-2 3CL Pro Peptidomimetic Inhibitors through the Catalytic Dyad Histidine-Specific Protein-Ligand Interactions.
Int J Mol Sci, 23, 2022
8IOG
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BU of 8iog by Molmil
Cryo-EM structure of porcine bc1 complex in isolated state
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Complex III subunit 9, ...
著者Wang, Y.X, Dong, J.Q, Yang, G.F.
登録日2023-03-11
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Cryo-EM structure of porcine bc1 complex in isolated state
To Be Published
7W5E
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BU of 7w5e by Molmil
Oxidase ChaP D49L mutant
分子名称: ChaP, FE (III) ION
著者Wang, Y, Zheng, W, Meng, Z, Jin, Y, Zhu, J, Tan, R.
登録日2021-11-30
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Alteration of the Catalytic Reaction Trajectory of a Vicinal Oxygen Chelate Enzyme by Directed Evolution.
Angew.Chem.Int.Ed.Engl., 61, 2022
8K3B
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BU of 8k3b by Molmil
The Pseudomonas aeruginosa RccR protein complexed with KDPG
分子名称: 2-keto 3 deoxy 6 phospho gluconate, MurR/RpiR family transcriptional regulator
著者Wang, Y.J, Wu, Z.W, Ji, Q.J.
登録日2023-07-14
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A KDPG sensor RccR governs Pseudomonas aeruginosa carbon metabolism and aminoglycoside antibiotic tolerance
To Be Published
3SPK
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BU of 3spk by Molmil
Tipranavir in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant
分子名称: HIV-1 protease, N-(3-{(1R)-1-[(6R)-4-HYDROXY-2-OXO-6-PHENETHYL-6-PROPYL-5,6-DIHYDRO-2H-PYRAN-3-YL]PROPYL}PHENYL)-5-(TRIFLUOROMETHYL)-2-PYRIDINESULFONAMIDE
著者Wang, Y, Liu, Z, Brunzelle, J.S, Kovari, I.A, Kovari, L.C.
登録日2011-07-01
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献The higher barrier of darunavir and tipranavir resistance for HIV-1 protease.
Biochem.Biophys.Res.Commun., 412, 2011
8HUH
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BU of 8huh by Molmil
Crystal structure of T2R-TTL-3a complex
分子名称: 2-(1-methylindol-4-yl)-4-(3,4,5-trimethoxyphenyl)-1~{H}-imidazo[4,5-c]pyridine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y.X, Chen, J.J.
登録日2022-12-23
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of T2R-TTL-3a complex
To Be Published
6ISO
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BU of 6iso by Molmil
Human SIRT3 Recognizing H3K4cr
分子名称: (2E)-BUT-2-ENAL, ARG-THR-LYS-GLN-THR-ALA-ARG, GLYCEROL, ...
著者Wang, Y, Hao, Q.
登録日2018-11-17
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Identification of 'erasers' for lysine crotonylated histone marks using a chemical proteomics approach.
Elife, 3, 2014
7E4P
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BU of 7e4p by Molmil
Crystal structure of tubulin in complex with Ansamitocin P3
分子名称: (1S,2S,3S,5S,6S,16Z,18Z,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Li, W.
登録日2021-02-14
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献C3 Ester Side Chain Plays a Pivotal Role in the Antitumor Activity of Maytansinoids
To Be Published
7E4Y
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BU of 7e4y by Molmil
Crystal structure of tubulin in complex with L-DM4-SMe
分子名称: (1S,2S,3S,5R,6S,16E,18E,20S,21R)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl (2S)-2-{methyl[3-methyl-3-(methyldisulfanyl)butanoyl]amino}propanoate (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Li, W.
登録日2021-02-16
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.708 Å)
主引用文献C3 Ester Side Chain Plays a Pivotal Role in the Antitumor Activity of Maytansinoids
To Be Published
8ITR
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BU of 8itr by Molmil
Crystal structure of lysophosphatidylcholine in complex with human serum albumin
分子名称: Albumin, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
著者Wang, Y, Jiang, L.G, Huang, M.D.
登録日2023-03-22
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Crystal structures of human serum albumin in complex with lysophosphatidylcholine.
Biophys.J., 122, 2023
8ITT
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BU of 8itt by Molmil
Crystal structure of lysophosphatidylcholine in complex with human serum albumin and myristate
分子名称: Albumin, MYRISTIC ACID, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
著者Wang, Y, Jiang, L.G, Huang, M.D.
登録日2023-03-22
公開日2024-01-31
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Crystal structures of human serum albumin in complex with lysophosphatidylcholine.
Biophys.J., 122, 2023
8K1O
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BU of 8k1o by Molmil
mycobacterial efflux pump, AMPPNP bound state
分子名称: CARDIOLIPIN, MAGNESIUM ION, Multidrug efflux system ATP-binding protein Rv1218c, ...
著者Wang, Y, Wu, F, Zhang, L, Rao, Z.
登録日2023-07-11
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献mycobacterial efflux pump, AMPPNP bound state
To Be Published

224201

件を2024-08-28に公開中

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