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PDB: 12895 results

6JJ4
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BU of 6jj4 by Molmil
Crystal structure of OsHXK6-apo form
Descriptor: Hexokinase-6
Authors:He, C, Wei, P, Chen, J, Wang, H, Wan, Y, Zhou, J, Zhu, Y, Huang, W, Yin, L.
Deposit date:2019-02-25
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of OsHXK6-apo
To Be Published
5Z6B
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BU of 5z6b by Molmil
Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide
Descriptor: 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-[beta-D-galactopyranose-(1-4)]alpha-L-rhamnopyranose, Putative ABC transporter substrate-binding protein YesO
Authors:Sugiura, H, Oiki, S, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2018-01-22
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.582 Å)
Cite:Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide
To Be Published
5ZHK
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BU of 5zhk by Molmil
Crystal structure of TrmD from Mycobacterium tuberculosis in complex with active-site inhibitor
Descriptor: N-[(4-{[cyclohexyl(ethyl)amino]methyl}phenyl)methyl]-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5WRG
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BU of 5wrg by Molmil
SARS-CoV spike glycoprotein
Descriptor: Spike glycoprotein
Authors:Gui, M, Song, W, Xiang, Y, Wang, X.
Deposit date:2016-12-01
Release date:2017-01-11
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-electron microscopy structures of the SARS-CoV spike glycoprotein reveal a prerequisite conformational state for receptor binding.
Cell Res., 27, 2017
5WSA
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BU of 5wsa by Molmil
Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate and allosteric activator Glucose 6-Phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, OXALATE ION, ...
Authors:Zhong, W, Cai, Q, El Sahili, A, Lescar, J, Dedon, P.C.
Deposit date:2016-12-06
Release date:2017-11-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Allosteric pyruvate kinase-based "logic gate" synergistically senses energy and sugar levels in Mycobacterium tuberculosis.
Nat Commun, 8, 2017
1CLK
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BU of 1clk by Molmil
CRYSTAL STRUCTURE OF STREPTOMYCES DIASTATICUS NO.7 STRAIN M1033 XYLOSE ISOMERASE AT 1.9 A RESOLUTION WITH PSEUDO-I222 SPACE GROUP
Descriptor: COBALT (II) ION, MAGNESIUM ION, XYLOSE ISOMERASE
Authors:Niu, L, Teng, M, Zhu, X, Gong, W.
Deposit date:1999-04-29
Release date:2000-05-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of xylose isomerase from Streptomyces diastaticus no. 7 strain M1033 at 1.85 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
6HE5
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BU of 6he5 by Molmil
20S core particle of PAN-proteasomes
Descriptor: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-activating nucleotidase
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5WPX
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BU of 5wpx by Molmil
Solution Structure of KstB-PCP loaded with nicotinic acid in kosinostatin biosynthesis
Descriptor: Peptidyl carrier protein, ~{S}-[2-[3-[[(2~{S})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] pyridine-3-carbothioate
Authors:Zhao, B, Lan, W, Tang, G, Cao, C.
Deposit date:2016-11-21
Release date:2018-02-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of KstB-PCP loaded with nicotinic acid in kosinostatin biosynthesis
To Be Published
6HCD
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BU of 6hcd by Molmil
Structure of universal stress protein from Archaeoglobus fulgidus
Descriptor: ACETATE ION, CHLORIDE ION, UNIVERSAL STRESS PROTEIN, ...
Authors:Shumilin, I.A, Loch, J.I, Cymborowski, M, Xu, X, Edwards, A, Di Leo, R, Shabalin, I.G, Joachimiak, A, Savchenko, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2018-08-14
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
6HCY
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BU of 6hcy by Molmil
human STEAP4 bound to NADP, FAD, heme and Fe(III)-NTA.
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Oosterheert, W, van Bezouwen, L.S, Rodenburg, R.N.P, Forster, F, Mattevi, A, Gros, P.
Deposit date:2018-08-17
Release date:2018-10-24
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human STEAP4 reveal mechanism of iron(III) reduction.
Nat Commun, 9, 2018
6HNU
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BU of 6hnu by Molmil
Crystal structure of the aminotransferase Aro8 from C. Albicans with ligands
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Aromatic amino acid aminotransferase I, ...
Authors:Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
Deposit date:2018-09-17
Release date:2019-02-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
5WHS
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BU of 5whs by Molmil
Crystal structure of the catalase-peroxidase from Neurospora crassa at 2.6 A
Descriptor: Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Diaz-Vilchis, A, Vega-Garcia, V, Rudino-Pinera, E, Hansberg, W.
Deposit date:2017-07-18
Release date:2018-01-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure, kinetics, molecular and redox properties of a cytosolic and developmentally regulated fungal catalase-peroxidase.
Arch. Biochem. Biophys., 640, 2018
5W1E
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BU of 5w1e by Molmil
PobR in complex with PHB
Descriptor: GLYCEROL, P-HYDROXYBENZOIC ACID, Putative transcriptional regulator, ...
Authors:Page, R, Peti, W, Lord, D.M, Bajaj, R, Zhang, R.
Deposit date:2017-06-02
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:A peculiar IclR family transcription factor regulates para-hydroxybenzoate catabolism in Streptomyces coelicolor.
Nucleic Acids Res., 46, 2018
5W1J
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BU of 5w1j by Molmil
Echinococcus granulosus thioredoxin glutathione reductas (egTGR)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Gao, W, Wang, Y, Dai, S.
Deposit date:2017-06-03
Release date:2017-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Enzymatic and Structural Basis for Inhibition of Echinococcus granulosus Thioredoxin Glutathione Reductase by Gold(I).
Antioxid. Redox Signal., 27, 2017
5VNJ
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BU of 5vnj by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal FF sorting motif (ERGIC-53)
Descriptor: C-terminal FF Ergic-53, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.806 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
6JJ9
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BU of 6jj9 by Molmil
Crystal structure of OsHXK6-Glc-ATP-Mg2+ complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Hexokinase-6, MAGNESIUM ION, ...
Authors:He, C, Wei, P, Chen, J, Wang, H, Wan, Y, Zhou, J, Zhu, Y, Huang, W, Yin, L.
Deposit date:2019-02-25
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of OsHXK6-Glc-ATP-Mg2+ complex
To Be Published
7FDZ
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BU of 7fdz by Molmil
Levansucrase from Brenneria sp. EniD 312 with sucrose
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Xu, W, Hou, X.D, Rao, Y.J, Pijning, T, Guskov, A, Mu, W.M.
Deposit date:2021-07-19
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structure of Levansucrase from the Gram-Negative Bacterium Brenneria Provides Insights into Its Product Size Specificity.
J.Agric.Food Chem., 70, 2022
6K05
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BU of 6k05 by Molmil
Crystal structure of BRD2(BD1)with ligand BY27 bound
Descriptor: (6~{R})-~{N}-(4-chlorophenyl)-1-methyl-8-(1-methylpyrazol-4-yl)-5,6-dihydro-4~{H}-[1,2,4]triazolo[4,3-a][1]benzazepin-6-amine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
Authors:Lu, T, Lu, W, Chen, D, Zhao, Y, Luo, C.
Deposit date:2019-05-05
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.935 Å)
Cite:Discovery, structural insight, and bioactivities of BY27 as a selective inhibitor of the second bromodomains of BET proteins.
Eur.J.Med.Chem., 182, 2019
6K0M
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BU of 6k0m by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11
Descriptor: Alpha-1,3-glucanase, CALCIUM ION, GLYCEROL, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
6K28
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BU of 6k28 by Molmil
Crystal structure of the 5-(Hydroxyethyl)-methylthiazole Kinase ThiM from Klebsiella pneumonia in complex with TZE
Descriptor: 2-(4-METHYL-THIAZOL-5-YL)-ETHANOL, Hydroxyethylthiazole kinase, MAGNESIUM ION
Authors:Chen, Y, Wang, L, Shang, F, Lan, J, Liu, W, Xu, Y.
Deposit date:2019-05-13
Release date:2019-07-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural insight of the 5-(Hydroxyethyl)-methylthiazole kinase ThiM involving vitamin B1 biosynthetic pathway from the Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 518, 2019
5ZO1
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BU of 5zo1 by Molmil
Crystal structure of mouse nectin-like molecule 4 (mNecl-4) full ectodomain (Ig1-Ig3), 2.2A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Cell adhesion molecule 4, GLYCEROL
Authors:Liu, X, An, T, Li, D, Fan, Z, Xiang, P, Li, C, Ju, W, Li, J, Hu, G, Qin, B, Yin, B, Wojdyla, J.A, Wang, M, Yuan, J, Qiang, B, Shu, P, Cui, S, Peng, X.
Deposit date:2018-04-12
Release date:2019-01-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structure of the heterophilic interaction between the nectin-like 4 and nectin-like 1 molecules.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6K0U
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BU of 6k0u by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase D1068A in complex with tetrasaccharides
Descriptor: Alpha-1,3-glucanase, CALCIUM ION, SULFATE ION, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
7F3B
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BU of 7f3b by Molmil
cocrystallization of Escherichia coli dihydrofolate reductase (DHFR) and its pyrrolo[3,2-f]quinazoline inhibitor.
Descriptor: 7-[(2-fluorophenyl)methyl]pyrrolo[3,2-f]quinazoline-1,3-diamine, Dihydrofolate reductase, GLYCEROL
Authors:Wang, H, You, X.F, Yang, X.Y, Li, Y, Hong, W.
Deposit date:2021-06-16
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The discovery of 1, 3-diamino-7H-pyrrol[3, 2-f]quinazoline compounds as potent antimicrobial antifolates.
Eur.J.Med.Chem., 228, 2022
6JTB
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BU of 6jtb by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) with citrate from Porphyromonas gingivalis (Space)
Descriptor: Asp/Glu-specific dipeptidyl-peptidase, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Roppongi, S, Kushibiki, C, Nakamura, A, Ogasawara, W, Tanaka, N.
Deposit date:2019-04-10
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase.
Sci Rep, 9, 2019
5ZBR
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BU of 5zbr by Molmil
Crystal Structure of Kinesin-3 KIF13B motor domain in AMPPNP form
Descriptor: Kinesin family member 13B, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ren, J.Q, Wang, S, Feng, W.
Deposit date:2018-02-12
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Delineation of the Neck Linker of Kinesin-3 for Processive Movement.
J. Mol. Biol., 430, 2018

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数据于2024-07-10公开中

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