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PDB: 12895 results

5ZG0
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BU of 5zg0 by Molmil
Crystal structure of the GluA2o LBD in complex with glutamate and Compound-1
Descriptor: 9-{4-[(propan-2-yl)oxy]phenyl}-3,4-dihydro-2H-2lambda~6~-pyrido[2,1-c][1,2,4]thiadiazine-2,2-dione, ACETATE ION, GLUTAMIC ACID, ...
Authors:Sogabe, S, Igaki, S, Hirokawa, A, Zama, Y, Lane, W, Snell, G.
Deposit date:2018-03-07
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:TAK-137, an AMPA-R potentiator with little agonistic effect, has a wide therapeutic window.
Neuropsychopharmacology, 44, 2019
1LIH
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BU of 1lih by Molmil
THREE-DIMENSIONAL STRUCTURES OF THE LIGAND-BINDING DOMAIN OF THE BACTERIAL ASPARTATE RECEPTOR WITH AND WITHOUT A LIGAND
Descriptor: 1,10-PHENANTHROLINE, ASPARTATE RECEPTOR
Authors:Kim, S.-H, Scott, W, Yeh, J.I, Prive, G.G, Milburn, M.
Deposit date:1995-04-18
Release date:1995-09-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand.
Science, 254, 1991
1MC0
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BU of 1mc0 by Molmil
Regulatory Segment of Mouse 3',5'-Cyclic Nucleotide Phosphodiesterase 2A, Containing the GAF A and GAF B Domains
Descriptor: 3',5'-cyclic nucleotide phosphodiesterase 2A, CYCLIC GUANOSINE MONOPHOSPHATE
Authors:Martinez, S, Wu, A, Glavas, N, Tang, X, Turley, S, Hol, W, Beavo, J.
Deposit date:2002-08-04
Release date:2002-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:The two GAF domains in phosphodiesterase 2A have distinct roles in dimerization and in cGMP binding.
Proc.Natl.Acad.Sci.USA, 99, 2002
4JOT
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BU of 4jot by Molmil
Crystal structure of enoyl-CoA hydrotase from Deinococcus radiodurans R1
Descriptor: Enoyl-CoA hydratase, putative, GLYCEROL
Authors:Eswaramoorthy, S, Chamala, S, Evans, B, Foti, F, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-03-18
Release date:2013-04-17
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of enoyl-CoA hydrotase from Deinococcus radiodurans R1
To be Published
4JRH
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BU of 4jrh by Molmil
Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio Cholerae (space group P43) at 2.2 Angstrom
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, ACETATE ION
Authors:Hou, J, Chruszcz, M, Shabalin, I.G, Zheng, H, Cooper, D.R, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-03-21
Release date:2013-04-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:

4G9Q
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BU of 4g9q by Molmil
Crystal structure of a 4-carboxymuconolactone decarboxylase
Descriptor: 4-carboxymuconolactone decarboxylase
Authors:Hickey, H.D, Mcgillick, B.E, Eswaramoorthy, S, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-07-24
Release date:2012-08-15
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of a 4-carboxymuconolactone decarboxylase
To be Published
4KN8
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BU of 4kn8 by Molmil
Crystal structure of Bs-TpNPPase
Descriptor: Thermostable NPPase
Authors:Guo, Z, Wang, F, Huang, J, Gong, W, Ji, C.
Deposit date:2013-05-09
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Crystal Structure of Thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase)
PROTEIN PEPT.LETT., 21, 2014
8TO0
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BU of 8to0 by Molmil
48-nm repeating structure of doublets from mouse sperm flagella
Descriptor: Cilia- and flagella- associated protein 210, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ...
Authors:Chen, Z, Shiozak, M, Hass, K.M, Skinner, W, Zhao, S, Guo, C, Polacco, B.J, Yu, Z, Krogan, N.J, Kaake, R.M, Vale, R.D, Agard, D.A.
Deposit date:2023-08-02
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking.
Cell, 186, 2023
4K2N
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BU of 4k2n by Molmil
Crystal structure of an enoyl-CoA hydratase/ carnithine racemase from Magnetospirillum magneticum
Descriptor: Enoyl-CoA hydratase/carnithine racemase
Authors:Eswaramoorthy, S, Chamala, S, Evans, B, Foti, F, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-09
Release date:2013-04-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an enoyl-CoA hydratase/ carnithine racemase from Magnetospirillum magneticum
To be Published
4K4D
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BU of 4k4d by Molmil
X-ray crystal structure of E. coli YbdB complexed with 2,4-dihydroxyphenacyl-CoA
Descriptor: 2,4-dihydroxyphenacyl coenzyme A, ACETATE ION, MALONATE ION, ...
Authors:Ru, W, Farelli, J.D, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2013-04-12
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure and Catalysis in the Escherichia coli Hotdog-fold Thioesterase Paralogs YdiI and YbdB.
Biochemistry, 53, 2014
4DLL
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BU of 4dll by Molmil
Crystal structure of a 2-hydroxy-3-oxopropionate reductase from Polaromonas sp. JS666
Descriptor: 2-hydroxy-3-oxopropionate reductase, SULFATE ION
Authors:Agarwal, R, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-02-06
Release date:2012-02-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of a 2-hydroxy-3-oxopropionate reductase from Polaromonas sp. JS666
To be Published
4KPK
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BU of 4kpk by Molmil
Crystal structure of a enoyl-CoA hydratase from Shewanella pealeana ATCC 700345
Descriptor: 1,2-ETHANEDIOL, Enoyl-CoA hydratase/isomerase
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-05-13
Release date:2013-05-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of a enoyl-CoA hydratase from Shewanella pealeana ATCC 700345
To be Published
4K4C
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BU of 4k4c by Molmil
X-ray crystal structure of E. coli YbdB complexed with phenacyl-CoA
Descriptor: Proofreading thioesterase EntH, phenacyl coenzyme A
Authors:Ru, W, Farelli, J.D, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2013-04-12
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Catalysis in the Escherichia coli Hotdog-fold Thioesterase Paralogs YdiI and YbdB.
Biochemistry, 53, 2014
4DVJ
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BU of 4dvj by Molmil
Crystal structure of a putative zinc-dependent alcohol dehydrogenase protein from Rhizobium etli CFN 42
Descriptor: Putative zinc-dependent alcohol dehydrogenase protein
Authors:Agarwal, R, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hellerich, B, Kar, A, Lafleur, J, Siedel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-02-23
Release date:2012-03-07
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal structure of a putative zinc-dependent alcohol dehydrogenase protein from Rhizobium etli CFN 42
To be Published
4DUP
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BU of 4dup by Molmil
Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
Descriptor: quinone oxidoreductase
Authors:Kumaran, D, Rice, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-02-22
Release date:2012-03-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
To be Published
4KD6
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BU of 4kd6 by Molmil
Crystal structure of a Enoyl-CoA hydratase/isomerase from Burkholderia graminis C4D1M
Descriptor: Enoyl-CoA hydratase/isomerase
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-24
Release date:2013-07-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of a Enoyl-CoA hydratase/isomerase from Burkholderia graminis C4D1M
To be Published
4KZM
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BU of 4kzm by Molmil
Crystal Structure of TR3 LBD S553A Mutant
Descriptor: GLYCEROL, Nuclear receptor subfamily 4 group A member 1
Authors:Li, F, Zhang, Q, Li, A, Tian, X, Cai, Q, Wang, W, Wang, Y, Chen, H, Xing, Y, Wu, Q, Lin, T.
Deposit date:2013-05-30
Release date:2013-12-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Orphan nuclear receptor TR3 acts in autophagic cell death via mitochondrial signaling pathway.
Nat.Chem.Biol., 10, 2014
4LZC
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BU of 4lzc by Molmil
W325F Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate
Descriptor: Epi-isozizaene synthase, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
Deposit date:2013-07-31
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.457 Å)
Cite:Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
4LTV
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BU of 4ltv by Molmil
Crystal structure of epi-isozizaene synthase from Streptomyces coelicolor A3(2)
Descriptor: Epi-isozizaene synthase, SULFATE ION
Authors:Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
Deposit date:2013-07-24
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
8SUE
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BU of 8sue by Molmil
Human asparagine synthetase (apo-ASNS)
Descriptor: Asparagine synthetase [glutamine-hydrolyzing]
Authors:Coricello, A, Zhu, W, Lupia, A, Gratteri, C, Vos, M, Chaptal, V, Alcaro, S, Takagi, Y, Richards, N.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Human asparagine synthetase (apo-ASNS)
To Be Published
4ASE
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BU of 4ase by Molmil
CRYSTAL STRUCTURE OF VEGFR2 (JUXTAMEMBRANE AND KINASE DOMAINS) IN COMPLEX WITH TIVOZANIB (AV-951)
Descriptor: TIVOZANIB, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2
Authors:McTigue, M, Deng, Y, Ryan, K, Brooun, A, Diehl, W, Stewart, A.
Deposit date:2012-04-30
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Molecular Conformations, Interactions, and Properties Associated with Drug Efficiency and Clinical Performance Among Vegfr Tk Inhibitors.
Proc.Natl.Acad.Sci.USA, 109, 2012
4KZS
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BU of 4kzs by Molmil
Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori
Descriptor: LPP20 lipofamily protein, PENTAETHYLENE GLYCOL
Authors:Quarantini, S, Cendron, L, Fischer, W, Zanotti, G.
Deposit date:2013-05-30
Release date:2014-06-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori.
Proteins, 82, 2014
4HHQ
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BU of 4hhq by Molmil
Serum paraoxonase-1 by directed evolution with the H115Q and H134Q mutations
Descriptor: BROMIDE ION, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Moshe, B.-D, Grzegorz, W, Mikael, E, Israel, S, Joel, L.S, Dan, S.T.
Deposit date:2012-10-10
Release date:2013-03-27
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic metal ion rearrangements underline promiscuity and evolvability of a metalloenzyme.
J.Mol.Biol., 425, 2013
4KZI
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BU of 4kzi by Molmil
Crystal Structure of TR3 LBD in complex with DPDO
Descriptor: 1-(3,5-dimethoxyphenyl)decan-1-one, GLYCEROL, Nuclear receptor subfamily 4 group A member 1
Authors:Li, F, Zhang, Q, Li, A, Tian, X, Cai, Q, Wang, W, Wang, Y, Chen, H, Xing, Y, Wu, Q, Lin, T.
Deposit date:2013-05-30
Release date:2013-12-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Orphan nuclear receptor TR3 acts in autophagic cell death via mitochondrial signaling pathway.
Nat.Chem.Biol., 10, 2014
8TX1
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BU of 8tx1 by Molmil
Characterization of the Chlamydomonas Flagellar Mastigoneme Filament Structure at 3.6A
Descriptor: Mastigoneme-like protein
Authors:Yue, W, Kai, Z.
Deposit date:2023-08-22
Release date:2023-10-25
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Cryo-EM reveals how the mastigoneme assembles and responds to environmental signal changes.
J.Cell Biol., 222, 2023

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