Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 results

3PL1
DownloadVisualize
BU of 3pl1 by Molmil
Determination of the crystal structure of the pyrazinamidase from M.tuberculosis : a structure-function analysis for prediction resistance to pyrazinamide.
Descriptor: FE (II) ION, PYRAZINAMIDASE/NICOTINAMIDASE PNCA (PZase)
Authors:Petrella, S, Gelus-Ziental, N, Mayer, C, Sougakoff, W.
Deposit date:2010-11-12
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Pyrazinamidase of Mycobacterium tuberculosis: Insights into Natural and Acquired Resistance to Pyrazinamide.
Plos One, 6, 2011
4FYP
DownloadVisualize
BU of 4fyp by Molmil
Crystal Structure of Plant Vegetative Storage Protein
Descriptor: MAGNESIUM ION, Vegetative storage protein 1
Authors:Chen, Y, Wei, J, Wang, M, Gong, W, Zhang, M.
Deposit date:2012-07-05
Release date:2013-06-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of Arabidopsis VSP1 reveals the plant class C-like phosphatase structure of the DDDD superfamily of phosphohydrolases
Plos One, 7, 2012
4JTV
DownloadVisualize
BU of 4jtv by Molmil
Crystal structure of 2009 pandemic influenza virus hemagglutinin complexed with human receptor analogue LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
Deposit date:2013-03-24
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
3PZ4
DownloadVisualize
BU of 3pz4 by Molmil
Crystal structure of FTase(ALPHA-subunit; BETA-subunit DELTA C10) in complex with BMS3 and lipid substrate FPP
Descriptor: (3R)-3-benzyl-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepine-7-carbonitrile, FARNESYL DIPHOSPHATE, Protein farnesyltransferase subunit beta, ...
Authors:Guo, Z, Bon, R.S, Stigter, E.A, Waldmann, H, Alexandrov, K, Blankenfeldt, W, Goody, R.S.
Deposit date:2010-12-14
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Development of Selective RabGGTase Inhibitors.
Angew.Chem.Int.Ed.Engl., 50, 2011
8TAU
DownloadVisualize
BU of 8tau by Molmil
APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB
Descriptor: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
Authors:Bodrug, T, Welsh, K.A, Bolhuis, D.L, Paulakonis, E, Martinez-Chacin, R.C, Liu, B, Pinkin, N, Bonacci, T, Cui, L, Xu, P, Roscow, O, Amann, S.J, Grishkovskaya, I, Emanuele, M.J, Harrison, J.S, Steimel, J.P, Hahn, K.M, Zhang, W, Zhong, E, Haselbach, D, Brown, N.G.
Deposit date:2023-06-27
Release date:2023-09-27
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C).
Nat.Struct.Mol.Biol., 30, 2023
4JWG
DownloadVisualize
BU of 4jwg by Molmil
Crystal structure of spTrm10(74)
Descriptor: ACETIC ACID, tRNA (guanine(9)-N1)-methyltransferase
Authors:Yan, W, Shao, Z.
Deposit date:2013-03-27
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrate.
Nucleic Acids Res., 42, 2014
4BVD
DownloadVisualize
BU of 4bvd by Molmil
Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.
Descriptor: 5-chloro-2-fluoro-N-[1-(4-piperidyl)pyrazol-4-yl]benzenesulfonamide, APOLIPOPROTEIN(A), CHLORIDE ION
Authors:Sandmark, J, Althage, M, Andersson, G.M.K, Antonsson, T, Blaho, S, Bodin, C, Bostrom, J, Chen, Y, Dahlen, A, Eriksson, P.O, Evertsson, E, Fex, T, Fjellstrom, O, Gustafsson, D, Hallberg, C, Hicks, R, Jarkvist, E, Johansson, C, Kalies, I, Kang, D, Svalstedt Karlsson, B, Kartberg, F, Legnehed, A, Lindqvist, A.M, Martinsson, S.A, Moberg, A, Petersson, A.U, Ridderstrom, M, Thelin, A, Tigerstrom, A, Vinblad, J, Xu, B, Knecht, W.
Deposit date:2013-06-25
Release date:2014-07-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)
To be Published
4JXR
DownloadVisualize
BU of 4jxr by Molmil
Crystal structure of a GNAT superfamily phosphinothricin acetyltransferase (Pat) from Sinorhizobium meliloti in complex with AcCoA
Descriptor: ACETYL COENZYME *A, Acetyltransferase, CITRATE ANION, ...
Authors:Majorek, K.A, Cooper, D.R, Porebski, P.J, Konina, K, Ahmed, M, Stead, M, Hillerich, B, Seidel, R, Bonanno, J.B, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-03-28
Release date:2013-05-15
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of a GNAT superfamily phosphinothricin acetyltransferase (Pat) from Sinorhizobium meliloti in complex with AcCoA
To be Published
4K8Z
DownloadVisualize
BU of 4k8z by Molmil
KOD Polymerase in binary complex with dsDNA
Descriptor: 1,2-ETHANEDIOL, COBALT HEXAMMINE(III), DNA (5'-D(*AP*AP*AP*TP*TP*CP*GP*CP*AP*GP*TP*TP*CP*GP*CP*G)-3'), ...
Authors:Bergen, K, Betz, K, Welte, W, Diederichs, K, Marx, A.
Deposit date:2013-04-19
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structures of KOD and 9N DNA Polymerases Complexed with Primer Template Duplex
Chembiochem, 14, 2013
4CXY
DownloadVisualize
BU of 4cxy by Molmil
Crystal structure of human FTO in complex with acylhydrazine inhibitor 21
Descriptor: (E)-4-(2-Nicotinoylhydrazinyl)-4-oxobut-2-enoic acid, ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE FTO, NICKEL (II) ION
Authors:Toh, D.W, Sun, L, Tan, J, Chen, Y, Lau, L.Z.M, Hong, W, Woon, E.C.Y, Gao, Y.G.
Deposit date:2014-04-09
Release date:2014-10-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A strategy based on nucleotide specificity leads to a subfamily-selective and cell-active inhibitor ofN6-methyladenosine demethylase FTO.
Chem Sci, 6, 2015
4KCT
DownloadVisualize
BU of 4kct by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with Oxaloacetate
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
Authors:Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-04-24
Release date:2014-01-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4KCV
DownloadVisualize
BU of 4kcv by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with 2-oxoglutaric acid
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, 2-OXOGLUTARIC ACID, GLYCEROL, ...
Authors:Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-04-24
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4KDO
DownloadVisualize
BU of 4kdo by Molmil
Crystal structure of the hemagglutinin of ferret-transmissible H5N1 virus in complex with human receptor analog LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Lu, X, Shi, Y, Zhang, W, Zhang, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-25
Release date:2013-07-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Structure and receptor-binding properties of an airborne transmissible avian influenza A virus hemagglutinin H5 (VN1203mut).
Protein Cell, 4, 2013
4CG3
DownloadVisualize
BU of 4cg3 by Molmil
Structural and functional studies on a thermostable polyethylene therephtalate degrading hydrolase from Thermobifida fusca
Descriptor: CUTINASE, SULFATE ION
Authors:Roth, C, Wei, R, Oeser, T, Then, J, Foellner, C, Zimmermann, W, Straeter, N.
Deposit date:2013-11-20
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and Functional Studies on a Thermostable Polyethylene Terephthalate Degrading Hydrolase from Thermobifida Fusca.
Appl.Microbiol.Biotechnol., 98, 2014
4KJM
DownloadVisualize
BU of 4kjm by Molmil
Crystal structure of the Staphylococcus aureus protein (NP_646141.1, domain 3912-4037) similar to streptococcal adhesins emb and ebhA/ebhB
Descriptor: ACETATE ION, CHLORIDE ION, Extracellular matrix-binding protein ebh, ...
Authors:Cymborowski, M, Shabalin, I.G, Joachimiak, G, Chruszcz, M, Gornicki, P, Zhang, R, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-03
Release date:2013-05-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the Staphylococcus aureus protein (NP_646141.1, domain 3912-4037) similar to streptococcal adhesins emb and ebhA/ebhB
To be Published
4CVS
DownloadVisualize
BU of 4cvs by Molmil
Structure of Apobacterioferritin Y45F variant
Descriptor: BACTERIOFERRITIN, CADMIUM ION
Authors:Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
Deposit date:2014-03-29
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
4G6H
DownloadVisualize
BU of 4g6h by Molmil
Crystal structure of NDH with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4CNF
DownloadVisualize
BU of 4cnf by Molmil
Crystal structure of Sulfolobus acidocaldarius TrmJ
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Van Laer, B, Somme, J, Roovers, M, Steyaert, J, Droogmans, L, Versees, W.
Deposit date:2014-01-22
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Characterization of Two Homologous 2'-O-Methyltransferases Showing Different Specificities for Their tRNA Substrates.
RNA, 20, 2014
7XZ9
DownloadVisualize
BU of 7xz9 by Molmil
Mutant (E236A) of the N-terminal domain of fucoidan lyase FdlA
Descriptor: Fucoidan lyase
Authors:Wang, J, Li, M, Pan, W.
Deposit date:2022-06-02
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
4CZ9
DownloadVisualize
BU of 4cz9 by Molmil
Structure of the sodium proton antiporter PaNhaP from Pyrococcus abyssii at pH 4.
Descriptor: NA+/H+ ANTIPORTER, PUTATIVE, octyl 4-O-beta-D-allopyranosyl-1-thio-beta-D-altropyranoside
Authors:Woehlert, D, Kuhlbrandt, W, Yildiz, O.
Deposit date:2014-04-16
Release date:2014-12-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and substrate ion binding in the sodium/proton antiporter PaNhaP.
Elife, 3, 2014
3QC8
DownloadVisualize
BU of 3qc8 by Molmil
Crystal Structure of FAF1 UBX Domain In Complex with p97/VCP N Domain Reveals The Conserved FcisP Touch-Turn Motif of UBX Domain Suffering Conformational Change
Descriptor: FAS-associated factor 1, Transitional endoplasmic reticulum ATPase
Authors:Kim, K.H, Kang, W, Suh, S.W, Yang, J.K.
Deposit date:2011-01-15
Release date:2011-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of FAF1 UBX domain in complex with p97/VCP N domain reveals a conformational change in the conserved FcisP touch-turn motif of UBX domain
Proteins, 79, 2011
3Q9U
DownloadVisualize
BU of 3q9u by Molmil
In silico and in vitro co-evolution of a high affinity complementary protein-protein interface
Descriptor: COENZYME A, CoA binding protein, consensus ankyrin repeat
Authors:Karanicolas, J, Corn, J.E, Chen, I, Joachimiak, L.A, Dym, O, Chung, S, Albeck, S, Unger, T, Hu, W, Liu, G, Delbecq, S, Montelione, G.T, Spiegel, C, Liu, D, Baker, D, Israel Structural Proteomics Center (ISPC)
Deposit date:2011-01-10
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A de novo protein binding pair by computational design and directed evolution.
Mol.Cell, 42, 2011
4D7N
DownloadVisualize
BU of 4d7n by Molmil
TetR(D) in complex with anhydrotetracycline and potassium
Descriptor: 5A,6-ANHYDROTETRACYCLINE, CHLORIDE ION, POTASSIUM ION, ...
Authors:Werten, S, Dalm, D, Palm, G.J, Hinrichs, W.
Deposit date:2014-11-25
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition.
Biochemistry, 53, 2014
3QFL
DownloadVisualize
BU of 3qfl by Molmil
Coiled-Coil Domain-Dependent Homodimerization of Intracellular MLA Immune Receptors Defines a Minimal Functional Module for Triggering Cell Death
Descriptor: MLA10
Authors:Chai, J, Cheng, W.
Deposit date:2011-01-21
Release date:2011-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Coiled-Coil Domain-Dependent Homodimerization of Intracellular Barley Immune Receptors Defines a Minimal Functional Module for Triggering Cell Death
Cell Host Microbe, 9, 2011
4KO6
DownloadVisualize
BU of 4ko6 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95K/Y108F)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Meng, W, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95K/Y108F)
To be Published

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon