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PDB: 12929 results

5WHQ
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Crystal structure of the catalase-peroxidase from Neurospora crassa at 2.9 A
Descriptor: Catalase-peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Diaz-Vilchis, A, Vega-Garcia, V, Rudino-Pinera, E, Hansberg, W.
Deposit date:2017-07-18
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure, kinetics, molecular and redox properties of a cytosolic and developmentally regulated fungal catalase-peroxidase.
Arch. Biochem. Biophys., 640, 2018
3RQ6
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Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis soaked with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP/ATP-dependent NAD(P)H-hydrate dehydratase, MAGNESIUM ION
Authors:Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-27
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
4QAU
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BU of 4qau by Molmil
Crystal structure of F43Y mutant of sperm whale myoglobin
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y, Tan, X, Li, W.
Deposit date:2014-05-06
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:A Novel Tyrosine-Heme C-O Covalent Linkage in F43Y Myoglobin: A New Post-translational Modification of Heme Proteins
Chembiochem, 16, 2015
5WYG
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BU of 5wyg by Molmil
The crystal structure of the apo form of Mtb MazF
Descriptor: Probable endoribonuclease MazF7
Authors:Xie, W, Chen, R, Tu, J.
Deposit date:2017-01-13
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.356 Å)
Cite:Structure of the MazF-mt9 toxin, a tRNA-specific endonuclease from Mycobacterium tuberculosis
Biochem. Biophys. Res. Commun., 486, 2017
3R9J
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BU of 3r9j by Molmil
4.3A resolution structure of a MinD-MinE(I24N) protein complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division topological specificity factor, Septum site-determining protein minD
Authors:Lovell, S, Battaile, K.P, Park, K.-T, Wu, W, Holyoak, T, Lutkenhaus, J.
Deposit date:2011-03-25
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:The Min Oscillator Uses MinD-Dependent Conformational Changes in MinE to Spatially Regulate Cytokinesis.
Cell(Cambridge,Mass.), 146, 2011
4D08
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BU of 4d08 by Molmil
PDE2a catalytic domain in complex with a brain penetrant inhibitor
Descriptor: 1-(5-butoxypyridin-3-yl)-4-methyl-8-(morpholin-4-ylmethyl)[1,2,4]triazolo[4,3-a]quinoxaline, CGMP-DEPENDENT 3', 5'-CYCLIC PHOSPHODIESTERASE, ...
Authors:Buijnsters, P, Andres, J.I, DeAngelis, M, Langlois, X, Rombouts, F, Sanderson, W, Tresadern, G, Trabanco, A, VanHoof, G, VanRoosbroeck, Y.
Deposit date:2014-04-24
Release date:2014-08-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Design of a Potent, Selective, and Brain Penetrating Pde2 Inhibitor with Demonstrated Target Engagement.
Acs Med.Chem.Lett., 5, 2014
3RT2
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BU of 3rt2 by Molmil
Crystal structure of apo-PYL10
Descriptor: Abscisic acid receptor PYL10
Authors:Hao, Q, Yin, P, Li, W, Wang, L, Yan, C, Wang, J, Yan, N.
Deposit date:2011-05-02
Release date:2011-06-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Molecular Basis of ABA-Independent Inhibition of PP2Cs by a Subclass of PYL Proteins
Mol.Cell, 42, 2011
4CR2
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Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
Deposit date:2014-02-25
Release date:2014-04-02
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
5WZ2
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Crystal structure of Zika virus NS5 methyltransferase bound to SAM and RNA analogue (m7GpppA)
Descriptor: NS5 MTase, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYLMETHIONINE
Authors:Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
3RTA
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BU of 3rta by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with Acetyl Coenzyme A
Descriptor: ACETYL COENZYME *A, POTASSIUM ION, Putative uncharacterized protein, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-03
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
5WWP
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BU of 5wwp by Molmil
Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13)
Descriptor: ORF1ab, SULFATE ION, ZINC ION
Authors:Hao, W, Wojdyla, J.A, Zhao, R, Han, R, Das, R, Zlatev, I, Manoharan, M, Wang, M, Cui, S.
Deposit date:2017-01-03
Release date:2017-07-05
Last modified:2021-09-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Middle East respiratory syndrome coronavirus helicase
PLoS Pathog., 13, 2017
6BFU
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BU of 6bfu by Molmil
Glycan shield and fusion activation of a deltacoronavirus spike glycoprotein fine-tuned for enteric infections
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein, ...
Authors:Xiong, X, Tortorici, M.A, Snijder, S, Yoshioka, C, Walls, A.C, Li, W, Seattle Structural Genomics Center for Infectious Disease (SSGCID), McGuire, A.T, Rey, F.A, Bosch, B.J, Veesler, D.
Deposit date:2017-10-27
Release date:2017-11-22
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Glycan Shield and Fusion Activation of a Deltacoronavirus Spike Glycoprotein Fine-Tuned for Enteric Infections.
J. Virol., 92, 2018
6B3X
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BU of 6b3x by Molmil
Crystal structure of CstF-50 in complex with CstF-77
Descriptor: Cleavage stimulation factor subunit 1, Cleavage stimulation factor subunit 3
Authors:Yang, W, Hsu, P, Yang, F, Song, J.E, Varani, G.
Deposit date:2017-09-25
Release date:2017-11-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Reconstitution of the CstF complex unveils a regulatory role for CstF-50 in recognition of 3'-end processing signals.
Nucleic Acids Res., 46, 2018
5WZ3
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BU of 5wz3 by Molmil
Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase(RdRP)
Descriptor: NS5 RdRp, ZINC ION
Authors:Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
5X29
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BU of 5x29 by Molmil
NMR structure of the SARS Coronavirus E protein pentameric ion channel
Descriptor: Envelope small membrane protein
Authors:Torres, J, Surya, W, Li, Y.
Deposit date:2017-01-31
Release date:2017-06-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural model of the SARS coronavirus E channel in LMPG micelles
Biochim. Biophys. Acta, 1860, 2018
4CR3
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BU of 4cr3 by Molmil
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
Deposit date:2014-02-25
Release date:2014-04-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
4CR4
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BU of 4cr4 by Molmil
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
Deposit date:2014-02-25
Release date:2014-04-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
3OE9
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BU of 3oe9 by Molmil
Crystal structure of the chemokine CXCR4 receptor in complex with a small molecule antagonist IT1t in P1 spacegroup
Descriptor: (6,6-dimethyl-5,6-dihydroimidazo[2,1-b][1,3]thiazol-3-yl)methyl N,N'-dicyclohexylimidothiocarbamate, C-X-C chemokine receptor type 4, Lysozyme Chimera
Authors:Wu, B, Mol, C.D, Han, G.W, Katritch, V, Chien, E.Y.T, Liu, W, Cherezov, V, Stevens, R.C, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)
Deposit date:2010-08-12
Release date:2010-10-27
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.
Science, 330, 2010
4D5I
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BU of 4d5i by Molmil
Hypocrea jecorina cellobiohydrolase Cel7A E212Q soaked with xylotriose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLULOSE 1,4-BETA-CELLOBIOSIDASE, COBALT (II) ION, ...
Authors:Momeni, M.H, Ubhayasekera, W, Stahlberg, J, Hansson, H.
Deposit date:2014-11-05
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural Insights Into the Inhibition of Cellobiohydrolase Cel7A by Xylooligosaccharides.
FEBS J., 282, 2015
1OWH
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BU of 1owh by Molmil
Substituted 2-Naphthamidine Inhibitors of Urokinase
Descriptor: 6-[(Z)-AMINO(IMINO)METHYL]-N-[4-(AMINOMETHYL)PHENYL]-2-NAPHTHAMIDE, SULFATE ION, Urokinase-type plasminogen activator
Authors:Wendt, M.D, Rockway, T.W, Geyer, A, McClellan, W, Weitzberg, M, Zhao, X, Mantei, R, Nienaber, V.L, Stewart, K, Klinghofer, V, Giranda, V.L.
Deposit date:2003-03-28
Release date:2003-09-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Identification of Novel Binding Interactions in the Development of Potent, Selective 2-Naphthamidine Inhibitors of Urokinase. Synthesis, Structural Analysis, and SAR of N-Phenyl Amide 6-Substitution.
J.Med.Chem., 47, 2004
1P8J
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BU of 1p8j by Molmil
CRYSTAL STRUCTURE OF THE PROPROTEIN CONVERTASE FURIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DECANOYL-ARG-VAL-LYS-ARG-CHLOROMETHYLKETONE INHIBITOR, ...
Authors:Henrich, S, Cameron, A, Bourenkov, G.P, Kiefersauer, R, Huber, R, Lindberg, I, Bode, W, Than, M.E.
Deposit date:2003-05-07
Release date:2003-07-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Crystal Structure of the Proprotein Processing Proteinase Furin Explains its Stringent Specificity
Nat.Struct.Biol., 10, 2003
4CZ8
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BU of 4cz8 by Molmil
Structure of the sodium proton antiporter PaNhaP from Pyrococcus abyssii at pH 8.
Descriptor: CITRATE ANION, NA+/H+ ANTIPORTER, PUTATIVE, ...
Authors:Woehlert, D, Kuhlbrandt, W, Yildiz, O.
Deposit date:2014-04-16
Release date:2014-12-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structure and Substrate Ion Binding in the Sodium/Proton Antiporter Panhap.
Elife, 3, 2014
4CZA
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BU of 4cza by Molmil
Structure of the sodium proton antiporter PaNhaP from Pyrococcus abyssii with bound thallium ion.
Descriptor: ACETATE ION, NA+/H+ ANTIPORTER, PUTATIVE, ...
Authors:Woehlert, D, Kuhlbrandt, W, Yildiz, O.
Deposit date:2014-04-16
Release date:2014-12-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and substrate ion binding in the sodium/proton antiporter PaNhaP.
Elife, 3, 2014
5X41
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BU of 5x41 by Molmil
3.5A resolution structure of a cobalt energy-coupling factor transporter using LCP method-CbiMQO
Descriptor: Cobalt ABC transporter ATP-binding protein, Cobalt transport protein CbiM, Uncharacterized protein CbiQ
Authors:Bao, Z, Qi, X, Zhao, W, Li, D, Zhang, P.
Deposit date:2017-02-09
Release date:2017-04-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Structure and mechanism of a group-I cobalt energy coupling factor transporter
Cell Res., 27, 2017
4OJV
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BU of 4ojv by Molmil
Crystal structure of unliganded yeast PDE1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3',5'-cyclic-nucleotide phosphodiesterase 1, SULFATE ION, ...
Authors:Tian, Y, Cui, W, Huang, M, Robinson, H, Wan, Y, Wang, Y, Ke, H.
Deposit date:2014-01-21
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.
Biochemistry, 53, 2014

223532

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