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PDB: 13052 results

5E6N
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Crystal structure of C. elegans LGG-2
Descriptor: Protein lgg-2
Authors:Qi, X, Ren, J.Q, Wu, F, Zhang, H, Feng, W.
Deposit date:2015-10-10
Release date:2016-01-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Structural Basis of the Differential Function of the Two C. elegans Atg8 Homologs, LGG-1 and LGG-2, in Autophagy
Mol.Cell, 60, 2015
3AMI
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BU of 3ami by Molmil
The crystal structure of the M16B metallopeptidase subunit from Sphingomonas sp. A1
Descriptor: zinc peptidase
Authors:Maruyama, Y, Chuma, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-08-20
Release date:2011-02-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Heterosubunit composition and crystal structures of a novel bacterial M16B metallopeptidase
J.Mol.Biol., 407, 2011
5E1J
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Structure of voltage-gated two-pore channel TPC1 from Arabidopsis thaliana
Descriptor: BARIUM ION, CALCIUM ION, Two pore calcium channel protein 1
Authors:Guo, J, Zeng, W, Chen, Q, Lee, C, Chen, L, Yang, Y, Jiang, Y.
Deposit date:2015-09-29
Release date:2015-12-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.308 Å)
Cite:Structure of the voltage-gated two-pore channel TPC1 from Arabidopsis thaliana.
Nature, 531, 2016
3ANJ
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Crystal structure of unsaturated glucuronyl hydrolase from Streptcoccus agalactiae
Descriptor: Putative uncharacterized protein gbs1889
Authors:Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-09-02
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
1YGE
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BU of 1yge by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K
Descriptor: FE (III) ION, LIPOXYGENASE-1
Authors:Minor, W, Steczko, J, Stec, B, Otwinowski, Z, Bolin, J.T, Walter, R, Axelrod, B.
Deposit date:1996-06-04
Release date:1997-07-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of soybean lipoxygenase L-1 at 1.4 A resolution.
Biochemistry, 35, 1996
5E6M
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BU of 5e6m by Molmil
Crystal structure of human wild type GlyRS bound with tRNAGly
Descriptor: GLYCYL-ADENOSINE-5'-PHOSPHATE, Glycine--tRNA ligase, NICKEL (II) ION, ...
Authors:Xie, W, Qin, X, Deng, X, Chen, L, Liu, Y.
Deposit date:2015-10-10
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.927 Å)
Cite:Crystal Structure of the Wild-Type Human GlyRS Bound with tRNA(Gly) in a Productive Conformation
J.Mol.Biol., 428, 2016
3AFL
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BU of 3afl by Molmil
Crystal structure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, Oligo alginate lyase
Authors:Ochiai, A, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-03-09
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Crystal structure of exotype alginate lyase Atu3025 from Agrobacterium tumefaciens
J.Biol.Chem., 285, 2010
2ARK
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BU of 2ark by Molmil
Structure of a flavodoxin from Aquifex aeolicus
Descriptor: Flavodoxin, GLYCEROL, PHOSPHATE ION
Authors:Cuff, M.E, Quartey, P, Zhou, M, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-19
Release date:2005-10-25
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a flavodoxin from Aquifex aeolicus
To be Published
3AHT
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BU of 3aht by Molmil
Crystal structure of rice BGlu1 E176Q mutant in complex with laminaribiose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase 7, SULFATE ION, ...
Authors:Chuenchor, W, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Svasti, J, Ketudat Cairns, J.R.
Deposit date:2010-04-29
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
2ASQ
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Solution Structure of SUMO-1 in Complex with a SUMO-binding Motif (SBM)
Descriptor: Protein inhibitor of activated STAT2, Small ubiquitin-related modifier 1
Authors:Song, J, Zhang, Z, Hu, W, Chen, Y.
Deposit date:2005-08-23
Release date:2005-10-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Small Ubiquitin-like Modifier (SUMO) Recognition of a SUMO Binding Motif: A reversal of the bound orientation
J.Biol.Chem., 280, 2005
3AKA
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BU of 3aka by Molmil
Structural basis for prokaryotic calcium-mediated regulation by a Streptomyces coelicolor calcium-binding protein
Descriptor: CALCIUM ION, Putative calcium binding protein
Authors:Zhao, X, Pang, H, Wang, S, Zhou, W, Yang, K, Bartlam, M.
Deposit date:2010-07-09
Release date:2011-01-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for prokaryotic calciummediated regulation by a Streptomyces coelicolor calcium binding protein
Protein Cell, 1, 2010
5DOY
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BU of 5doy by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
Authors:Polikanov, Y.S, Starosta, A.L, Juette, M.F, Altman, R.B, Terry, D.S, Lu, W, Burnett, B.J, Dinos, G, Reynolds, K, Blanchard, S.C, Steitz, T.A, Wilson, D.N.
Deposit date:2015-09-11
Release date:2015-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
2WO7
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BU of 2wo7 by Molmil
Isopenicillin N synthase with substrate analogue L,L,D-ACd2Ab (unexposed)
Descriptor: DELTA-(L-ALPHA-AMINOADIPOYL)-L-CYSTEINYL-D-VINYLGLYCINE, FE (II) ION, ISOPENICILLIN N SYNTHASE
Authors:Ge, W, Clifton, I.J, Adlington, R.M, Baldwin, J.E, Rutledge, P.J.
Deposit date:2009-07-22
Release date:2010-07-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic Studies on the Binding of Selectively Deuterated Lld- and Lll-Substrate Epimers by Isopenicillin N Synthase.
Biochem.Biophys.Res.Commun., 398, 2010
6JYB
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BU of 6jyb by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with CW laser (ND-10%) at 95K.
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
Deposit date:2019-04-26
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
5DPQ
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BU of 5dpq by Molmil
Crystal Structure of E72A mutant of domain swapped dimer Human Cellular Retinol Binding Protein
Descriptor: ACETATE ION, Retinol-binding protein 2
Authors:Assar, Z, Nossoni, Z, Wang, W, Geiger, J.H, Borhan, B.
Deposit date:2015-09-14
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.775 Å)
Cite:Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.
Structure, 24, 2016
3AHV
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BU of 3ahv by Molmil
Semi-active E176Q mutant of rice bglu1 covalent complex with 2-deoxy-2-fluoroglucoside
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-deoxy-2-fluoro-alpha-D-glucopyranose, Beta-glucosidase 7, ...
Authors:Chuenchor, W, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Svasti, J, Ketudat Cairns, J.R.
Deposit date:2010-04-30
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
2X1N
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Truncation and Optimisation of Peptide Inhibitors of CDK2, Cyclin A Through Structure Guided Design
Descriptor: 2-METHYL-N-[(1Z)-3-NITROCYCLOHEXA-2,4-DIEN-1-YLIDENE]-4,5-DIHYDRO[1,3]THIAZOLO[4,5-H]QUINAZOLIN-8-AMINE, ACE-LEU-ASN-PFF-NH2, CELL DIVISION PROTEIN KINASE 2, ...
Authors:Kontopidis, G, Andrews, M.J, McInnes, C, Plater, A, Innes, L, Renachowski, S, Cowan, A, Fischer, P.M, McIntyre, N.A, Griffiths, G, Barnett, A.L, Slawin, A.M.Z, Jackson, W, Thomas, M, Zheleva, D.I, Wang, S, Blake, D.G, Westwood, N.J.
Deposit date:2009-12-31
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Design, Synthesis, and Evaluation of 2-Methyl- and 2-Amino-N-Aryl-4,5-Dihydrothiazolo[4,5-H]Quinazolin-8-Amines as Ring-Constrained 2-Anilino-4-(Thiazol-5-Yl)Pyrimidine Cyclin-Dependent Kinase Inhibitors.
J.Med.Chem., 53, 2010
2EPW
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BU of 2epw by Molmil
Solution structure of the 24th C2H2 type zinc finger domain of Zinc finger protein 268
Descriptor: ZINC ION, Zinc finger protein 268
Authors:Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 24th C2H2 type zinc finger domain of Zinc finger protein 268
To be Published
2WXV
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BU of 2wxv by Molmil
Structure of CDK2-CYCLIN A with a Pyrazolo(4,3-h) quinazoline-3- carboxamide inhibitor
Descriptor: CELL DIVISION PROTEIN KINASE 2, CYCLIN-A2, N,1-DIMETHYL-8-{[1-(METHYLSULFONYL)PIPERIDIN-4-YL]AMINO}-1H-PYRAZOLO[4,3-H]QUINAZOLINE-3-CARBOXAMIDE, ...
Authors:Traquandi, G, Ciomei, M, Ballinari, D, Casale, E, Colombo, N, Croci, V, Fiorentini, F, Isacchi, A, Longo, A, Mercurio, C, Panzeri, A, Pastori, W, Pevarello, P, Volpi, D, Roussel, P, Vulpetti, A, Brasca, M.G.
Deposit date:2009-11-10
Release date:2010-02-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of Potent Pyrazolo[4,3-H]Quinazoline-3-Carboxamides as Multi-Cyclin-Dependent Kinase Inhibitors.
J.Med.Chem., 53, 2010
5E1L
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BU of 5e1l by Molmil
Structural and functional analysis of the E. coli FtsZ interacting protein, ZapC, reveals insight into molecular properties of a novel Z ring stabilizing protein
Descriptor: Cell division protein ZapC
Authors:Schumacher, M.A, Huang, K.-H, Tchorzewski, L, Zeng, W, Janakiraman, A.
Deposit date:2015-09-29
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Analyses Reveal Insights into the Molecular Properties of the Escherichia coli Z Ring Stabilizing Protein, ZapC.
J.Biol.Chem., 291, 2016
5E4N
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3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis with D-tyrosine bound in the tyrosine and phenylalanine binding sites
Descriptor: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, CHLORIDE ION, D-TYROSINE, ...
Authors:Reichau, S, Jiao, W, Parker, E.J.
Deposit date:2015-10-06
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Probing the Sophisticated Synergistic Allosteric Regulation of Aromatic Amino Acid Biosynthesis in Mycobacterium tuberculosis Using -Amino Acids.
Plos One, 11, 2016
2X3X
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structure of mouse syndapin I (crystal form 1)
Descriptor: PROTEIN KINASE C AND CASEIN KINASE SUBSTRATE IN NEURONS PROTEIN 1
Authors:Ma, Q, Rao, Y, Vahedi-Faridi, A, Saenger, W, Haucke, V.
Deposit date:2010-01-28
Release date:2010-04-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Molecular Basis for SH3 Domain Regulation of F-Bar-Mediated Membrane Deformation.
Proc.Natl.Acad.Sci.USA, 107, 2010
2E5P
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BU of 2e5p by Molmil
Solution structure of the TUDOR domain of PHD finger protein 1 (PHF1 protein)
Descriptor: PHD finger protein 1
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2007-06-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the TUDOR domain of PHD finger protein 1 (PHF1 protein)
To be Published
2VKV
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BU of 2vkv by Molmil
TetR (BD) variant L17G with reverse phenotype
Descriptor: 5A,6-ANHYDROTETRACYCLINE, MAGNESIUM ION, TETRACYCLINE REPRESSOR PROTEIN CLASS B FROM TRANSPOSON TN10, ...
Authors:Resch, M, Striegl, H, Henssler, E.M, Sevvana, M, Egerer-Sieber, C, Schiltz, E, Hillen, W, Muller, Y.A.
Deposit date:2008-01-02
Release date:2008-07-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A Protein Functional Leap: How a Single Mutation Reverses the Function of the Transcription Regulator Tetr.
Nucleic Acids Res., 36, 2008
1ZZU
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BU of 1zzu by Molmil
Rat nNOS D597N/M336V double mutant with L-N(omega)-Nitroarginine-2,4-L-Diaminobutyric Amide Bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, D-MANNITOL, ...
Authors:Li, H, Flinspach, M.L, Igarashi, J, Jamal, J, Yang, W, Gomez-Vidal, J.A, Litzinger, E.A, Silverman, R.B, Poulos, T.L.
Deposit date:2005-06-14
Release date:2005-12-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploring the Binding Conformations of Bulkier Dipeptide Amide Inhibitors in Constitutive Nitric Oxide Synthases.
Biochemistry, 44, 2005

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