Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12920 results

8GXQ
DownloadVisualize
BU of 8gxq by Molmil
PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X, Xu, Y.
Deposit date:2022-09-21
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (5.04 Å)
Cite:Structures of +1 nucleosome-bound PIC-Mediator complex.
Science, 378, 2022
5J3I
DownloadVisualize
BU of 5j3i by Molmil
NMR solution structure of [Sp, Sp]-PT dsDNA
Descriptor: DNA (5'-D(*CP*GP*(SSG)P*CP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*GP*CP*GP*(SSG)P*CP*CP*G)-3')
Authors:Lan, W, Hu, Z, Cao, C.
Deposit date:2016-03-30
Release date:2016-11-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural investigation into physiological DNA phosphorothioate modification
Sci Rep, 6, 2016
2XNB
DownloadVisualize
BU of 2xnb by Molmil
Discovery and Characterisation of 2-Anilino-4-(thiazol-5-yl) pyrimidine Transcriptional CDK Inhibitors as Anticancer Agents
Descriptor: 3,4-DIMETHYL-5-(2-{[(1Z)-4-PIPERAZIN-1-YLCYCLOHEXA-2,4-DIEN-1-YLIDENE]AMINO}PYRIMIDIN-4-YL)-1,3-THIAZOL-2(3H)-ONE, CELL DIVISION PROTEIN KINASE 2
Authors:Wang, S, Griffiths, G, Midgley, C.A, Barnett, A.L, Cooper, M, Grabarek, J, Ingram, L, Jackson, W, Kontopidis, G, McClue, S.J, McInnes, C, McLachlan, J, Meades, C, Mezna, M, Stuart, I, Thomas, M.P, Zheleva, D.I, Lane, D.P, Jackson, R.C, Glover, D.M, Blake, D.G, Fischer, P.M.
Deposit date:2010-08-01
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery and Characterisation of 2-Anilino-4-(Thiazol-5-Yl)Pyrimidine Transcriptional Cdk Inhibitors as Anticancer Agents
Chem.Biol., 17, 2010
8RHK
DownloadVisualize
BU of 8rhk by Molmil
Yeast 20S proteasome in complex with a linear oxindole epoxyketone (compound 6)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Linear oxindole epoxyketone, ...
Authors:Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M.
Deposit date:2023-12-15
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome.
Acs Med.Chem.Lett., 15, 2024
5JPH
DownloadVisualize
BU of 5jph by Molmil
Structure of a GNAT acetyltransferase SACOL1063 from Staphylococcus aureus in complex with CoA
Descriptor: Acetyltransferase SACOL1063, CHLORIDE ION, COENZYME A
Authors:Majorek, K.A, Osinski, T, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-05-03
Release date:2016-06-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Insight into the 3D structure and substrate specificity of previously uncharacterized GNAT superfamily acetyltransferases from pathogenic bacteria.
Biochim.Biophys.Acta, 1865, 2016
8GSF
DownloadVisualize
BU of 8gsf by Molmil
Echovirus3 empty particle in complex with 6D10 Fab (sideling)
Descriptor: Heavy chain of 6D10, Light chain of 6D10, VP0, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
8GSD
DownloadVisualize
BU of 8gsd by Molmil
Echovirus3 full particle in complex with 6D10 Fab
Descriptor: Genome polyprotein, Genome polyprotein (Fragment), Heavy chain of 6D10, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
8GSE
DownloadVisualize
BU of 8gse by Molmil
Echovirus3 capsid protein in complex with 6D10 Fab (upright)
Descriptor: Heavy chain of 6D10, Light chain of 6D10, VP0, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
8GSC
DownloadVisualize
BU of 8gsc by Molmil
Echovirus3 A-particle in complex with 6D10 Fab
Descriptor: Heavy chain of 6D10, Light chain of 6D10, VP1, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
5KQA
DownloadVisualize
BU of 5kqa by Molmil
Crystal structure of buckwheat glutaredoxin-glutathione complex
Descriptor: GLUTATHIONE, Glutaredoxin-glutathione complex
Authors:Zhang, X, Wang, W, Zhao, Y, Wang, Z, Wang, H.
Deposit date:2016-07-06
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural insights into the binding of buckwheat glutaredoxin with GSH and regulation of its catalytic activity
J. Inorg. Biochem., 173, 2017
2X1N
DownloadVisualize
BU of 2x1n by Molmil
Truncation and Optimisation of Peptide Inhibitors of CDK2, Cyclin A Through Structure Guided Design
Descriptor: 2-METHYL-N-[(1Z)-3-NITROCYCLOHEXA-2,4-DIEN-1-YLIDENE]-4,5-DIHYDRO[1,3]THIAZOLO[4,5-H]QUINAZOLIN-8-AMINE, ACE-LEU-ASN-PFF-NH2, CELL DIVISION PROTEIN KINASE 2, ...
Authors:Kontopidis, G, Andrews, M.J, McInnes, C, Plater, A, Innes, L, Renachowski, S, Cowan, A, Fischer, P.M, McIntyre, N.A, Griffiths, G, Barnett, A.L, Slawin, A.M.Z, Jackson, W, Thomas, M, Zheleva, D.I, Wang, S, Blake, D.G, Westwood, N.J.
Deposit date:2009-12-31
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Design, Synthesis, and Evaluation of 2-Methyl- and 2-Amino-N-Aryl-4,5-Dihydrothiazolo[4,5-H]Quinazolin-8-Amines as Ring-Constrained 2-Anilino-4-(Thiazol-5-Yl)Pyrimidine Cyclin-Dependent Kinase Inhibitors.
J.Med.Chem., 53, 2010
6O9K
DownloadVisualize
BU of 6o9k by Molmil
70S initiation complex
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Frank, J, Gonzalez Jr, R.L, kaledhonkar, S, Fu, Z, Caban, K, Li, W, Chen, B, Sun, M.
Deposit date:2019-03-14
Release date:2019-05-29
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Late steps in bacterial translation initiation visualized using time-resolved cryo-EM.
Nature, 570, 2019
6OEO
DownloadVisualize
BU of 6oeo by Molmil
Cryo-EM structure of mouse RAG1/2 NFC complex (DNA1)
Descriptor: CALCIUM ION, DNA (46-MER), DNA (57-MER), ...
Authors:Chen, X, Cui, Y, Zhou, Z.H, Yang, W, Gellert, M.
Deposit date:2019-03-27
Release date:2020-01-29
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Cutting antiparallel DNA strands in a single active site.
Nat.Struct.Mol.Biol., 27, 2020
5A2P
DownloadVisualize
BU of 5a2p by Molmil
THE COMPLEX STRUCTURE OF PDZ DOMAINS IN SYNTENIN-1 WITH 4L PEPTIDE
Descriptor: SYNDECAN-4, SYNTENIN-1
Authors:Yoo, J.H, Yun, J.H, Cho, H.S, Lee, W.
Deposit date:2015-05-21
Release date:2016-06-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Titl the Complex Structure of Pdz Domains in Syntenin-1 with 4L Peptide
To be Published
6OGJ
DownloadVisualize
BU of 6ogj by Molmil
MeCP2 MBD in complex with DNA
Descriptor: DNA (5'-D(*CP*GP*GP*AP*GP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*TP*AP*CP*AP*CP*TP*CP*CP*G)-3'), Methyl-CpG-binding protein 2, ...
Authors:Lei, M, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-04-02
Release date:2019-05-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Plasticity at the DNA recognition site of the MeCP2 mCG-binding domain.
Biochim Biophys Acta Gene Regul Mech, 1862, 2019
6OGZ
DownloadVisualize
BU of 6ogz by Molmil
In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Inner capsid protein VP2, RNA (5'-R(P*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*A)-3'), ...
Authors:Ding, K, Chang, T, Shen, W, Roy, P, Zhou, Z.H.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:In situ structures of rotavirus polymerase in action and mechanism of mRNA transcription and release.
Nat Commun, 10, 2019
2WXV
DownloadVisualize
BU of 2wxv by Molmil
Structure of CDK2-CYCLIN A with a Pyrazolo(4,3-h) quinazoline-3- carboxamide inhibitor
Descriptor: CELL DIVISION PROTEIN KINASE 2, CYCLIN-A2, N,1-DIMETHYL-8-{[1-(METHYLSULFONYL)PIPERIDIN-4-YL]AMINO}-1H-PYRAZOLO[4,3-H]QUINAZOLINE-3-CARBOXAMIDE, ...
Authors:Traquandi, G, Ciomei, M, Ballinari, D, Casale, E, Colombo, N, Croci, V, Fiorentini, F, Isacchi, A, Longo, A, Mercurio, C, Panzeri, A, Pastori, W, Pevarello, P, Volpi, D, Roussel, P, Vulpetti, A, Brasca, M.G.
Deposit date:2009-11-10
Release date:2010-02-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of Potent Pyrazolo[4,3-H]Quinazoline-3-Carboxamides as Multi-Cyclin-Dependent Kinase Inhibitors.
J.Med.Chem., 53, 2010
6OHD
DownloadVisualize
BU of 6ohd by Molmil
P38 in complex with T-3220137
Descriptor: 3-(3-tert-butyl-2-oxo-2,3-dihydro-1H-imidazo[4,5-b]pyridin-6-yl)-4-methyl-N-(1,2-oxazol-3-yl)benzamide, Mitogen-activated protein kinase 14
Authors:Lane, W, Saikatendu, K.
Deposit date:2019-04-05
Release date:2019-11-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]Pyridin-2-one-Based p38 MAP Kinase Inhibitors: Part 2.
Chemmedchem, 14, 2019
6OIF
DownloadVisualize
BU of 6oif by Molmil
Cryo-EM structure of human TorsinA filament
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Torsin-1A
Authors:Zheng, W, Demircioglu, F.E, Schwartz, T.U, Egelman, E.H.
Deposit date:2019-04-09
Release date:2019-07-24
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The AAA + ATPase TorsinA polymerizes into hollow helical tubes with 8.5 subunits per turn.
Nat Commun, 10, 2019
6OKK
DownloadVisualize
BU of 6okk by Molmil
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Wong, W, Scheres, S.H.W.
Deposit date:2019-04-13
Release date:2019-05-22
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine.
Elife, 3, 2014
2X3X
DownloadVisualize
BU of 2x3x by Molmil
structure of mouse syndapin I (crystal form 1)
Descriptor: PROTEIN KINASE C AND CASEIN KINASE SUBSTRATE IN NEURONS PROTEIN 1
Authors:Ma, Q, Rao, Y, Vahedi-Faridi, A, Saenger, W, Haucke, V.
Deposit date:2010-01-28
Release date:2010-04-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Molecular Basis for SH3 Domain Regulation of F-Bar-Mediated Membrane Deformation.
Proc.Natl.Acad.Sci.USA, 107, 2010
5KYX
DownloadVisualize
BU of 5kyx by Molmil
crystal structure of Sec23 and TANGO1 peptide1 complex
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24D, ZINC ION
Authors:Ma, W, Goldberg, J.
Deposit date:2016-07-22
Release date:2016-09-07
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3.516 Å)
Cite:TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
2X64
DownloadVisualize
BU of 2x64 by Molmil
GLUTATHIONE-S-TRANSFERASE FROM XYLELLA FASTIDIOSA
Descriptor: CHLORIDE ION, GLUTATHIONE, GLUTATHIONE-S-TRANSFERASE
Authors:Muniz, J.R.C, Rodrigues, N.C, Bleicher, L, Travensolo, R.F, Garcia, W.
Deposit date:2010-02-14
Release date:2010-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Biophysical Characterization of the Recombinant Glutathione-S-Transferase from Xylella
To be Published
5KYY
DownloadVisualize
BU of 5kyy by Molmil
Crystal structure of Sec23 and TANGO1 peptide4 complex
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24D, ZINC ION
Authors:Ma, W, Goldberg, J.
Deposit date:2016-07-22
Release date:2016-09-07
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3.403 Å)
Cite:TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
5L00
DownloadVisualize
BU of 5l00 by Molmil
Self-complimentary RNA 15mer binding with GMP monomers
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')
Authors:Zhang, W, Tam, C.P, Szostak, J.W.
Deposit date:2016-07-26
Release date:2016-12-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Unusual Base-Pairing Interactions in Monomer-Template Complexes.
ACS Cent Sci, 2, 2016

223166

건을2024-07-31부터공개중

PDB statisticsPDBj update infoContact PDBjnumon